GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 268 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Sphingolipid de novo biosynthesis
  • ABCC1
  • ABCG2
  • Abcg2
  • CERS1
  • CERS2
  • CERS3
  • CERS4
  • CERS5
  • CERS6
  • CYB5B
  • DEGS1
  • DEGS2
  • FA2H
  • KDSR
  • MFSD2B
  • MRP1
  • ORMDL1
  • ORMDL2
  • ORMDL3
  • SAMD8
  • SGMS1
  • SGMS2
  • SPHK1
  • SPHK2
  • SPNS2
  • SPTLC1
  • SPTLC2
  • SPTLC3
  • SPTSSA
Canis familiaris (dog)
Removal of aminoterminal propeptides from gamma-carboxylated proteins
  • BGLAP
  • F10
  • F2
  • F7
  • F9
  • FURIN
  • GAS6
  • PROC
  • PROS1
Canis familiaris (dog)
Inositol transporters
  • SLC2A13
  • SLC5A11
  • SLC5A3
  • SMIT
Canis familiaris (dog)
Post-translational modification: synthesis of GPI-anchored proteins
  • ALPI
  • ALPL
  • ART3
  • ART4
  • BST1
  • CD109
  • CD52
  • CDW52
  • CE5
  • CEACAM1
  • CEACAM20
  • CNTN5
  • CPM
  • FCGR3A
  • GLIPR2
  • GP2
  • GPIHBP1
  • GPLD1
  • HMCN2
  • IZUMO1R
  • LOC100683099
  • LOC119875695
  • LOC476816
  • LOC478984
  • LSAMP
  • LY6D
  • LY6E
  • LY6G6C
  • LY6G6D
  • LY6H
  • LYPD1
  • LYPD3
  • LYPD4
  • LYPD5
  • LYPD6B
  • LYPD8
  • MELTF
  • NEGR1
  • NRN1
  • NRN1L
  • NTM
  • OPCML
  • OTOA
  • PLET1
  • PRND
  • PSCA
  • RTN4RL1
  • RTN4RL2
  • SPACA4
  • SPRN
  • TECTA
  • TECTB
  • TEX101
  • THY1
  • VNN1
  • XPNPEP2
Canis familiaris (dog)
Metal ion SLC transporters
  • CP
  • HEPH
  • SLC11A1
  • SLC11A2
  • SLC30A10
  • SLC31A1
  • SLC40A1
  • SLC41A1
  • SLC41A2
Canis familiaris (dog)
Reduction of cytosolic Ca++ levels
  • ATP2A1
  • ATP2A2
  • ATP2A3
  • ATP2B1
  • ATP2B2
  • ATP2B3
  • ATP2B4
  • CALM2
  • NCX1
  • SLC8A1
  • SLC8A2
  • SLC8A3
  • SRI
Canis familiaris (dog)
Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation
  • FN3K
  • FN3KRP
Canis familiaris (dog)
Vitamin B2 (riboflavin) metabolism
  • ACP5
  • ENPP1
  • FLAD1
  • RFK
  • SLC52A2
  • SLC52A3
Canis familiaris (dog)
Negative regulation of FGFR2 signaling
  • CBL
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF3A
  • FGF4
  • FGF4B
  • FGF4C
  • FGF5
  • FGF6
  • FGF7
  • FGF7A
  • FGF7B
  • FGF8
  • FGF8B
  • FGF9
  • FGFR2
  • FRS2
  • GRB2
  • KGF
  • MAPK1
  • MAPK3
  • PTPN11
  • RPS27A
  • UBA52
  • UBB
  • UBC
  • UBCEP2
Canis familiaris (dog)
Signaling by SCF-KIT
  • CHEK1
  • CMA1
  • FER
  • FES
  • FYN
  • GAB2
  • GRAP
  • GRAP2
  • GRB10
  • GRB2
  • GRB7
  • HRAS
  • JAK2
  • KIT
  • KITLG
  • KRAS
  • LCK
  • LOC100856339
  • LYN
  • MGF
  • MMP9
  • NRAS
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PRKCA
  • PTPN11
  • PTPRU
  • RAC1
  • SOS1
  • SRC
  • STAT1
  • STAT3
  • STAT5A
  • STAT5B
  • TEC
  • VAV1
  • YES1
Canis familiaris (dog)
DAP12 interactions
  • B2M
  • CD300E
  • CD94
  • CLEC5A
  • KLRD1
  • LOC119863908
  • LOC119866326
  • LOC119873404
  • LOC476396
  • LOC484343
  • SIGLEC15
  • SIRPA
  • TREM1
  • TYROBP
Canis familiaris (dog)
PI3K/AKT Signaling
  • AILIM
  • AREG
  • BTC
  • CD19
  • CD28
  • CD80
  • CD86
  • EGF
  • EGFR
  • EPGN
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • ESR1
  • ESR2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF19
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF3A
  • FGF4
  • FGF4B
  • FGF4C
  • FGF5
  • FGF6
  • FGF7
  • FGF7A
  • FGF7B
  • FGF8
  • FGF8B
  • FGF9
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FLT3
  • FLT3LG
  • FRS2
  • FYN
  • GAB1
  • GAB2
  • GRB2
  • HBEGF
  • HGF
  • ICOS
  • IL1RAP
  • IL33
  • IRAK1
  • IRAK4
  • IRS1
  • IRS2
  • KGF
  • KIT
  • KITLG
  • KL
  • KLB
  • LCK
  • LOC100856339
  • MAPKAP1
  • MET
  • MGF
  • MLST8
  • MTOR
  • MYD88
  • NRG1
  • NRG2
  • NRG3
  • PDGFA
  • PDGFB
  • PDGFRA
  • PDGFRB
  • PDPK1
  • PIK3AP1
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PRR5
  • PTPN11
  • RAC1
  • RAC2
  • RHOG
  • RICTOR
  • SGK1
  • SRC
  • STRN
  • TGFA
  • TRAF6
  • TRAT1
  • VAV1
Canis familiaris (dog)
Collagen degradation
  • COL12A1
  • COL13A1
  • COL15A1
  • COL18A1
  • COL19A1
  • COL25A1
  • COL26A1
  • CTSB
  • CTSD
  • FURIN
  • MMP1
  • MMP12
  • MMP13
  • MMP14
  • MMP15
  • MMP2
  • MMP20
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PHYKPL
  • PRSS2
  • TMPRSS6
Canis familiaris (dog)
Regulation of IGF Activity by IGFBP
  • ADAM10
  • AFP
  • AHSG
  • ALB
  • AMBN
  • AMELX
  • AMTN
  • ANO8
  • APLP2
  • APOA1
  • APOA2
  • APOA5
  • APOB
  • APOE
  • APP
  • BMP15
  • BMP4
  • BPIFB2
  • C3
  • CALU
  • CCN1
  • CDH2
  • CHGB
  • CHRDL1
  • CKAP4
  • COA5
  • CP
  • CSF1
  • DMP1
  • DNAJC3
  • ENAM
  • F5
  • FAM20A
  • FAM20C
  • FBN1
  • FGA
  • FGF23
  • FGF8B
  • FN1
  • FSTL1
  • FSTL3
  • FUCA2
  • GAS6
  • GOLM1
  • GPC3
  • GRP94
  • HRC
  • HSP90B1
  • HSPC4
  • IGF1
  • IGF2
  • IGFBP2
  • IGFBP3
  • IGFBP4
  • IGFBP5
  • IGFBP6
  • IGFBP7
  • IGFIA
  • IL6
  • ITIH2
  • KNG1
  • KTN1
  • LGALS1
  • LOC102156332
  • LOC481722
  • LOC607874
  • LTBP1
  • MATN3
  • MBTPS1
  • MEGF6
  • MELTF
  • MEN1
  • MEPE
  • MFGE8
  • MIA3
  • MXRA8
  • NOTUM
  • NUCB1
  • P4HB
  • PAPPA
  • PAPPA2
  • PDIA6
  • PENK
  • PNPLA2
  • PRKCSH
  • PROC
  • PRSS23
  • QSOX1
  • RCN1
  • SCG2
  • SCG3
  • SERPINA1
  • SERPINC1
  • SERPIND1
  • SPARCL1
  • SPP1
  • SPP2
  • STC2
  • TGOLN2
  • TIMP1
  • TMEM132A
  • TNC
  • TRA1
  • VCAN
  • VGF
  • VWA1
  • WFS1
Canis familiaris (dog)
Gastrin-CREB signalling pathway via PKC and MAPK
  • CCKBR
  • CREB1
  • GAS
  • GAST
  • MAPK1
  • MAPK3
  • MAPK7
  • RPS6KA1
  • RPS6KA2
  • RPS6KA3
Canis familiaris (dog)
Signaling by BMP
  • ACVR2A
  • ACVR2B
  • ACVRL1
  • BMP10
  • BMP2
  • BMPR1A
  • BMPR1B
  • BMPR2
  • CER1
  • CHRDL1
  • FSTL1
  • GDF2
  • GREM2
  • INHA
  • INHBA
  • NOG
  • SKI
  • SMAD1
  • SMAD4
  • SMAD5
  • SMAD6
  • SMAD7
  • SMAD9
  • SMURF1
  • SMURF2
  • TGFBR3
  • UBE2D1
  • UBE2D3
  • ZFYVE16
Canis familiaris (dog)
Iron uptake and transport
  • ABCG2
  • ACO1
  • Abcg2
  • CAND1
  • CP
  • CUL1
  • CYBRD1
  • FBXL5
  • FLVCR1
  • FTH
  • FTH1
  • FTL
  • HEPH
  • HMOX1
  • HMOX2
  • IREB2
  • LCN2
  • LOC119865338
  • LOC119878918
  • LOC608550
  • NEDD8
  • RPS27A
  • SKP1
  • SLC11A2
  • SLC22A17
  • SLC40A1
  • SLC46A1
  • UBA52
  • UBB
  • UBC
  • UBCEP2
Canis familiaris (dog)
Phosphorylation of CD3 and TCR zeta chains
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • CSK
  • DLA-DQA1
  • DLA-DRA
  • HLA-DQB2
  • LCK
  • PAG1
  • PTPN22
  • PTPRC
  • PTPRJ
  • TRAV29DV5
Canis familiaris (dog)
Cilium Assembly
  • ATAT1
  • HDAC6
  • MEC17
Canis familiaris (dog)
TNFR1-induced proapoptotic signaling
  • BIRC2
  • BIRC3
  • BIRC4
  • CYLD
  • IKBKE
  • IRF9
  • MIB2
  • RBCK1
  • RIPK1
  • SPATA2
  • TBK1
  • TNF
  • TNFA
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • XIAP
Canis familiaris (dog)
MET interacts with TNS proteins
  • HGF
  • ITGB1
  • MET
  • TNS3
  • TNS4
Canis familiaris (dog)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40L
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNFSF5
  • TNLG1C
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Canis familiaris (dog)
EPHB-mediated forward signaling
  • ACTB
  • ACTG1
  • ACTR2
  • ACTR3
  • ARHGEF28
  • ARPC1A
  • ARPC1B
  • ARPC2
  • ARPC3
  • ARPC4
  • ARPC5
  • CDC42
  • FYN
  • GRIN1
  • GRIN2B
  • HRAS
  • KALRN
  • LOC119867035
  • LYN
  • NMDAR1
  • PAK1
  • PTK2
  • RAC1
  • RASA1
  • RHOA
  • ROCK1
  • ROCK2
  • SRC
  • TIAM1
  • WASL
  • YES1
Canis familiaris (dog)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • MAN1A1
  • MAN1A2
  • MAN1C1
Canis familiaris (dog)
TNFR1-induced NF-kappa-B signaling pathway
  • BIRC2
  • BIRC3
  • BIRC4
  • CHUK
  • CYLD
  • IKBKB
  • IKBKG
  • IRF9
  • MAP3K7
  • OPTN
  • OTUD1
  • OTUD7B
  • RACK1
  • RBCK1
  • RIPK1
  • SPATA2
  • TAB1
  • TAB2
  • TAB3
  • TNF
  • TNFA
  • TNFAIP3
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • USP2
  • USP21
  • USP4
  • XIAP
Canis familiaris (dog)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024