GlyCosmos Portal

Submissions

G25520XG

Summary

GlyTouCan ID: G25520XG
IUPAC Condensed: Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-4)][Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs: N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level: Linkage defined saccharide
Monoisotopic Mass: 1989.73

External Links

GlyConnect structure

2933

GlyGen

G25520XG

GlycoChemExplorer

JCGG-M0000003216

JCGGDB AIST

JCGG-STR017443

KEGG GLYCAN

G10779

UniCarbKB

ChEBI

148462

PubChem Compound

91861029

PubChem Substance

252294956

3D Structures

GlycoNAVI: G25520XG
GLYCAM: DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-4][DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH

Organisms

Displaying **all 5** entries
Organisms	Evidence
Coturnix japonica (Japanese quail)	GlyTouCan(glycome-db)
Rattus norvegicus (Norway rat)	GlyConnectStructure
Mus musculus (house mouse)	GlyConnectStructure
unidentified influenza virus	GlyTouCan(glycome-db)
Homo sapiens (human)	GlyConnectStructure GlyGen(UniCarbKB) GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

Viruses [inference]

Riboviria [inference]

Orthornavirae [inference]

Negarnaviricota [inference]

Polyploviricotina [inference]

Insthoviricetes [inference]

Articulavirales [inference]

Orthomyxoviridae [inference]

unclassified Orthomyxoviridae [inference]

unidentified influenza virus

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus [inference]

Rattus norvegicus (Norway rat)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Sauropsida (sauropsids) [inference]

Sauria (diapsids) [inference]

Archelosauria [inference]

Archosauria [inference]

Dinosauria [inference]

Saurischia [inference]

Theropoda [inference]

Coelurosauria [inference]

Aves (birds) [inference]

Neognathae [inference]

Galloanserae [inference]

Galliformes (landfowls) [inference]

Phasianidae (turkeys) [inference]

Perdicinae [inference]

Coturnix [inference]

Coturnix japonica (Japanese quail)

GlycoGene Database (GGDB)

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Product	Reference
FUT10	GDP-Fuc	G25520XG	G95617FJ	23986452

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Product	Reference
FUT10	GDP-Fuc	G25520XG	G95617FJ	23986452

KEGG BRITE Database

KEGG ID

G10779

GALAXY

Glucose Units

ODS: 20.2
Amide: 7.5

Degrading Enzymes

Displaying **all 5** entries
Enzyme	Substrate	Product
α-Sialidase	G14127XU	G25520XG
β-Galactosidase	G25520XG	G30159WR
α-Fucosidase	G25520XG	G52934AK
β-HexNAcase	G25520XG	G78059CC
α-Sialidase	G91023GB	G25520XG

Glycans containing this structure in GALAXY

G89168LM

G14127XU

G91023GB

GALAXY: Glycoanalysis by the three axes of MS and chromatography.

Core Protein

Displaying entries **1 - 10** of 37 in total

1

2

3

4

Next ›

Last »
UniProt ID	Protein Name	Reference	Source
O75015	Low affinity immunoglobulin gamma Fc region receptor III-B	25345863	GlyGen GlyConnect
P01215	Glycoprotein hormones alpha chain	15316280	GlyGen
P01854	Immunoglobulin heavy constant epsilon		GlyConnect GlyConnect
P01857	Immunoglobulin heavy constant gamma 1	12652077 2138613 21609021 2363690 24680513 3567160 3661998 8870235	GlyGen GlyConnect
P01859	Immunoglobulin heavy constant gamma 2	12652077 2138613 21609021 2363690 24680513 29671580 3567160 8870235	GlyGen GlyConnect GlyConnect
P01860	Immunoglobulin heavy constant gamma 3	12652077 2138613 2363690 24680513 3567160 8870235	GlyGen GlyConnect GlyConnect
P01861	Immunoglobulin heavy constant gamma 4	12652077 2138613 2363690 24680513 3567160 8870235	GlyGen GlyConnect
P01871	Immunoglobulin heavy constant mu	24706782 25802287	GlyGen GlyConnect
P01876	Immunoglobulin heavy constant alpha 1	10211705	GlyGen GlyConnect GlyConnect GlyConnect
P01877	Immunoglobulin heavy constant alpha 2		GlyConnect GlyConnect GlyConnect

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:b-dglc-HEX-1:5
11s:n-acetyl
12b:a-dman-HEX-1:5
13b:b-dglc-HEX-1:5
14s:n-acetyl
15b:b-dgal-HEX-1:5
16b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:5o(4+1)10d
10:10d(2+1)11n
11:5o(6+1)12d
12:12o(2+1)13d
13:13d(2+1)14n
14:13o(4+1)15d
15:1o(6+1)16d

WURCS

WURCS=2.0/5,11,10/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-1-3-1-4-5/a4-b1_a6-k1_b4-c1_c3-d1_c4-g1_c6-h1_d2-e1_e4-f1_h2-i1_i4-j1

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools