GlyCosmos Portal

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Organisms	Evidence
Klebsiella sp.	GlyTouCan(bcsdb)
Leishmania amazonensis	GlyTouCan(bcsdb)
Salmonella	GlyTouCan(bcsdb)
Homo sapiens (human)	GlycoEpitope
Asteroidea (starfishes)	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Echinodermata (echinoderms) [inference]

Eleutherozoa [inference]

Asterozoa [inference]

Asteroidea (starfishes)

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Discoba [inference]

Euglenozoa [inference]

Kinetoplastea (kinetoplasts) [inference]

Metakinetoplastina [inference]

Trypanosomatida [inference]

Trypanosomatidae [inference]

Leishmaniinae [inference]

Leishmania [inference]

Leishmania mexicana species complex [inference]

Leishmania amazonensis

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Klebsiella/Raoultella group [inference]

Klebsiella [inference]

unclassified Klebsiella [inference]

Klebsiella sp.

Shigella [inference]

Shigella flexneri

Salmonella

GlycoGene Database (GGDB)

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G71142DF	Ceramide	G84224TW	Ceramide	9435216
ST3GAL5	CMP-Neu5Ac	G84224TW	ceramide	G91237TK	ceramide	9822625
FUT5	GDP-Fuc	G84224TW	R	G57548NB	R	8780523
B4GALT6	UDP-Gal	G71142DF	Cer	G84224TW	Cer	9593693
A4GALT	UDP-Gal	G84224TW	Cer	G00059MO	Cer	10747952

Displaying entries **1 - 5** of 21 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G71142DF	Ceramide	G84224TW	Ceramide	9435216
ST3GAL3	CMP-Neu5Ac	G84224TW	free	G91237TK	free	8288606
ST6GAL1	CMP-Neu5Ac	G84224TW	free	G28868ZC	free	12235148
ST3GAL4	CMP-Neu5Ac	G84224TW	free	G91237TK	free	8288606
ST3GAL5	CMP-Neu5Ac	G84224TW	ceramide	G91237TK	ceramide	9822625

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
ST8SIA3	CMP-Neu5Ac	G84224TW	Cer	7782326
ST3GAL6	CMP-Neu5Ac	G84224TW	ceramide	10206952
ST6GAL1	CMP-Neu5Ac	G84224TW	ceramide	12235148
ST8SIA6	CMP-Neu5Ac	G84224TW		11980897
ST3GAL1	CMP-Neu5Ac	G84224TW	free	8288606

KEGG BRITE Database

KEGG ID

G00092

Enzyme

References

Reactions

Displaying **all 7** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05937	2.4.3.9	G84224TW	G91237TK
R06276	2.4.1.274	G71142DF	G84224TW
R05960	2.4.1.228	G84224TW	G00059MO
R05971	2.4.1.206	G84224TW	G06239NA
R05961	3.2.1.22	G00059MO	G84224TW
R05938	2.4.1.92	G84224TW	G90562PB
R11320	2.4.1.87	G84224TW	G78074HX

GlycoEpitope

Epitope ID: EP0078
Epitope Name: Lactosylceramide

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
LIN
1:1o(4+1)2d

WURCS

WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1

Literature (from GlyTouCan)

BCSDB

Roslund MU et al. Complete (1)H and (13)C NMR chemical shift assignments of mono-, di-, and trisaccharides as basis for NMR chemical shift predictions of polysaccharides using the computer program casper. Carbohydr Res. 2011 Aug 16;346:(11):1311-9. doi: 10.1016/j.carres.2011.04.033. PMID: 21621752.

PubAnnotation

Displaying entries **1 - 5** of 10 in total

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Title	Authors	Source	Publication Date	PubMed ID
Identification and validation of a blood- based diagnostic lipidomic signature of pediatric inflammatory bowel disease.	Salihovic S Nyström N Mathisen CB Kruse R Olbjørn C Andersen S Noble AJ Dorn-Rasmussen M Bazov I Perminow G Opheim R Detlie TE Huppertz-Hauss G Hedin CRH Carlson M Öhman L Magnusson MK Keita ÅV Söderholm JD D'Amato M Orešič M Wewer V Satsangi J Lindqvist CM Burisch J Uhlig HH Repsilber D Hyötyläinen T Høivik ML Halfvarson J	Nat Commun	2024 Jun 3	38830848
Sphingolipid profiling of human plasma and FPLC-separated lipoprotein fractions by hydrophilic interaction chromatography tandem mass spectrometry.	Scherer M Böttcher A Schmitz G Liebisch G	Biochim Biophys Acta	2011 Feb	21081176
Sphingolipid transport in mitotic HeLa cells.	Collins RN Warren G	J Biol Chem	1992 Dec 5	1447226
Biosynthesis of the blood group Pk and P1 antigens by human kidney microsomes.	Bailly P Piller F Gillard B Veyrières A Marcus D Cartron JP	Carbohydr Res	1992 Apr 10	1516091
A monoclonal antibody for terminal beta-galactose. Use in analysis of glycosphingolipids.	Kalisiak A Oosterwijk E Minniti JG Old LJ Scheinberg DA	Glycoconj J	1991 Feb	1726670

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

3D Structures

KEGG BRITE Database

GlycoEpitope

Sequence Descriptors

Literature (from GlyTouCan)

International Collaboration

Acknowledgements