GlyCosmos Portal

Drosophila melanogaster (fruit fly)

Summary

Taxonomy ID: 7227
PubChem Taxonomy: 7227

Genes (311) Glycans (91) Glycoproteins (923) Lectins (38) Pathways (597)

Displaying entries **151 - 175** of **597** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	GlyTouCan ID
Regulation of IGF Activity by IGFBP	ADAM10 endopeptidase Accessory gland protein Acp76A Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase a, isoform A Amyloid-beta-like protein Anoctamin BM-40 Brummer, isoform B CG6687 protein Ccn Detonator, isoform E Division abnormally delayed protein Doppelganger von brummer Extracellular serine/threonine protein CG31145 FI01422p Fibroblast growth factor Follistatin, isoform A GH10112p GH18514p GH21475p Galectin Glucosidase 2 subunit beta Heat shock protein 83 IP10416p IP16409p LD25575p MIP05602p Male accessory gland protein Maverick Menin Nucleobindin 1 Palmitoleoyl-protein carboxylesterase NOTUM Protein decapentaplegic Protein disulfide-isomerase A6 homolog Protein disulfide-isomerase Putative alpha-L-fucosidase Putative neural-cadherin 2 RE02548p RE27547p Regeneration, isoform B SD11922p Serine endopeptidase Serine protease inhibitor 27A Serine protease inhibitor 28Dc Serine protease inhibitor 42Dd Serine protease inhibitor 77Ba Serine protease inhibitor 88Ea Serpin 100A Serpin 28B, isoform A Serpin 28Da Serpin 28Db Serpin 28F Serpin 38F, isoform A Serpin 42Db, isoform C Serpin 42Dc, isoform A Serpin 43Aa Serpin 4 Serpin 77Bb Serpin 85F Serpin domain-containing protein Sulfhydryl oxidase Syndecan Tissue inhibitor of metalloproteinase Transferrin 2 Transferrin Transferrin Transport and Golgi organization protein 1 Wolframin	A1Z6I3 A1Z6R3 A1Z6R4 A1Z6V5 A1ZAC0 A4VCL2 E1JI03 M9PFV8 O97365 P07713 P14599 P49415 P54399 Q0E8C8 Q0E8V6 Q24114 Q3HKQ3 Q4V3G2 Q7JQR3 Q7JV69 Q7JWX3 Q7K508 Q7K8Y5 Q7KA66 Q7YTY6 Q86NV3 Q8IMZ9 Q8SYY7 Q8SZF4 Q9V3N1 Q9V416 Q9V438 Q9V4E6 Q9VA48 Q9VAY2 Q9VDT9 Q9VFC1 Q9VFC2 Q9VH14 Q9VH46 Q9VHA8 Q9VII7 Q9VJB6 Q9VJD1 Q9VJW9 Q9VL44 Q9VLQ7 Q9VLU4 Q9VLV3 Q9VLZ8 Q9VM47 Q9VMA7 Q9VP10 Q9VPH9 Q9VPU6 Q9VTJ4 Q9VTZ5 Q9VUH4 Q9VUX3 Q9VVK3 Q9VVK7 Q9VVW1 Q9VWB4 Q9VWV6 Q9VXY8 Q9W0H8 X2JEB0	11410 143958_at 34Da 6h1 ADAM10 ATGL Acp76A Appl Atgl BEST:CK02682 BEST:SD05682 BG642378 BG642378(6h1) BG:DS04929.1 BG:DS07660.3 BM-40 Sparc BM-40-SPARC BM-40-SPARC-RA BM-40/SPARC BM40 BMM BNL BcDNA:GH11973 Bmm Bnl Branchless CG12318 CG12551 CG12955 CG12956 CG13735 CG13736 CG14446 CES CG14470 CG31145 CG33266 CG4804-RA CG5587 CG6266 CG9384-RA CK02682 CT17486 CT19876 CT22079 CaBP1 CadN2 Ccn DCB-45 DFGF DmATGL DmBnl DmQSOX1 Dmel\CG10913 Dmel\CG10956 Dmel\CG12172 Dmel\CG12807 Dmel\CG1342 Dmel\CG13778 Dmel\CG13950 Dmel\CG14446 Dmel\CG15270 Dmel\CG1857 Dmel\CG1859 Dmel\CG1865 Dmel\CG1901 Dmel\CG31902 Dmel\CG32183 Dmel\CG32190 Dmel\CG32203 Dmel\CG33121 Dmel\CG33466 Dmel\CG3666 Dmel\CG43366 Dmel\CG4608 Dmel\CG4670 Dmel\CG4804 Dmel\CG5295 Dmel\CG5520 Dmel\CG5560 Dmel\CG6014 Dmel\CG6186 Dmel\CG6289 Dmel\CG6378 Dmel\CG6453 Dmel\CG6663 Dmel\CG6687 Dmel\CG6717 Dmel\CG7147 Dmel\CG7169 Dmel\CG7722 Dmel\CG8137 Dmel\CG8286 Dmel\CG9148 Dmel\CG9334 Dmel\CG9384 Dmel\CG9453 Dmel\CG9454 Dmel\CG9455 Dmel\CG9460 Dob FGF Fol1 Fs Fuca GCS2beta GP93 GS11410 Gp93 HSP90 HSP90B1 Hsp90 KUZ Kuz MAV MEN1 MGAT MRE2 MTf Mav Menin Menin1 Mgat4a Mnn Mnn1 NEC NUCB1 Nec Notum NucB1 P58IPK Pdi Q9VAY2 Q9VJD1_DROME QSOX1 Qsox1 RGN S1P SCAP SCF SD05682.5prime SER1 SER2 SER3 SKI-1/S1P SPARC Sdc Ser1 Ser2 Ser3 Serp2 Sp2 Sp3 Sp4 Sp6 Sparc Spn1 Spn100 Spn100A Spn2 Spn27A Spn28B Spn28D Spn28Da Spn28Db Spn28Dc Spn28F Spn3 Spn31A Spn38F Spn4 Spn42Da Spn42Db Spn42Dc Spn42Dd Spn42De Spn43 Aa Spn43A Spn43Aa Spn43Ab Spn43Ac Spn43Ad Spn47C Spn4A Spn5 Spn53F Spn55B Spn6 Spn7 Spn75F Spn77 Spn77Ba Spn77Bb Spn77Bc Spn85F Spn88Ea Spn88Eb Syd TGF-b TGL TSF1 Tango1 Tf Timp Trf Tsf1 Tsf2 Tsf3 Tsf3-RA anon-EST:Posey14 anon-EST:Posey265 anon-EST:Posey291 anon-WO0118057.1 anon-WO0118057.2 anon-WO0118057.3 bmm bnl br38 dCCN dFGF dFS dFol1 dGRP94 dHSP90 dIPK dMGAT4-1 dS1P dSPARC dSerp2 dSparc dally dfs dmnucb1 dob dpp dsparc dtn fs gp93 kuz l(2)03782 l(2)34Da l(2)br38 l(2)c00136 l(2)k01403 l(3)00534 l(3)06916 l(3)neo52 l34Da lincRNA.300 lincRNA.S8753 lincRNA.S9601 mav menin mnn1 nec nucb1 p93 qsox1 rgn scf soy nut sp-6 sp2 sp3 sp4 sp6 sparc spn2 spn4 spn43Ab spn47C tsf1 tsf3 wf wfs1 wwk
Regulation of HSF1-mediated heat shock response	14-3-3 protein epsilon GEO08380p1 Heat shock factor protein MAP kinase-activated protein kinase 2 Mitogen-activated protein kinase ERK-A Protein kinase shaggy Putative glycogen synthase kinase-3 homolog Replication factor A protein 2 Replication protein A 70 kDa DNA-binding subunit	P18431 P22813 P40417 P49071 P83101 P92177 Q24492 Q9VIH1 Q9VYW3	14-3-3e 14-3-3epsilon 153194_at BcDNA:RH55360 D-SSB DRP-A DmRP-A DmRPA Dmel\CG15220 Dmel\CG9273 ERKa Hsf MAPK MAPk-Ak2 RP-A RPA RPA 30 kDa RPA1 RPA2 RPA3 RPA30 RpA-30 RpA2 SR3-9 Ssb-30 dRP-A dRPA2 gsk3 gskt l(1)G0241 rl sgg zw3
Regulation of HMOX1 expression and activity	Heme oxygenase SD07518p	Q9VGJ9 Q9VPQ7	CT34507 DmHO DmSPP Dmel\CG11840 Dmel\CG14716 HO HO-1 HOX Ho SPP Spp dHO ho shanti spp
Regulation of FOXO transcriptional activity by acetylation	Forkhead box protein O Histone acetyltransferase GCN5 NAD-dependent histone deacetylase sirtuin-1 histone acetyltransferase	M9MS40 Q95V55 Q9VK34 Q9VTZ1	Ada4 Afx CBP CBP/p300 CBP_ CG15321 Cbp Crbp Dmel\CG15319 Dmel\CG4107 GCN5 Gcn5 Gcn5/PCAF Gcn5/Pcaf KAT KAT2 Nej Nejire P/CAF P300 PCAF Pcaf Sir2 Sirt1 anon-WO0147981.11 anon-WO0172774.89 anon-WO03040301.89 cbp dCBP dGCN5 dGCN5 HAT dGcn5 dGcn5i dKAT2 dKAT3 dPCAF dmCBP dmGCN5 dmHAG401 foxo gcn5 l(1)G0112 l(1)G0350 l(1)G0470 nej nej CBP p/CAF p300 p300/CBP pCAF
Regulation of Complement cascade	Corin, isoform B Notopleural, isoform A Peptidase S1 domain-containing protein Serine protease filzig Serine proteinase stubble Uncharacterized protein, isoform A trypsin trypsin trypsin	A1Z709 A1Z7M3 A1Z7M5 A1Z7M7 A8DY75 B7YZU2 Q05319 Q8IRR3 Q9W453	CG11824 CG6048-RA CG8181 Corin Dmel\CG13744 Dmel\CG2105 Dmel\CG32755 Dmel\CG34350 Dmel\CG6048 Dmel\CG8170 Dmel\CG8172 Np SP108 SP233 SP32 SP54 SP59 SP67 SP75 Sb Sb-sbd c-SP32 c-SP67 cSP32 cSP54 cSP59 cSP67 corin flz lint np
Regulation of CDH11 function	ADAM metalloprotease Adherens junction protein p120 Armadillo segment polarity protein Mind-meld, isoform J Putative neural-cadherin 2	P18824 Q6QU65 Q7PLI0 Q9VJB6 X2JE21	CG15603 CG15604 CG31314 CG31385 CG9163 CT23341 CT26192 CadN2 DMeltrin Dmel\CG17484 Dmel\CG42252 Dmel\CG7649 Dp120[ctn] Dp120ctn FBgn0051314 Meltrin Neu3 P120 P120-catenin P120ctn arm dP120ctn dp120ctn meltrin mmd p120 p120[ctn] p120ctn
Recruitment of the 'destruction complex' to the receptor complex, the degradation of AXN and release of ARM	Adenomatous polyposis coli 2 Adenomatous polyposis coli Armadillo segment polarity protein Axin Casein kinase I isoform alpha Discs overgrown protein kinase Frizzled-2 Frizzled Low-density lipoprotein receptor-related protein Protein kinase shaggy Protein phosphatase PP2A 55 kDa regulatory subunit Protein wingless Segment polarity protein dishevelled Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit Serine/threonine-protein phosphatase PP2A non-specific serine/threonine protein kinase	O76324 P09615 P18431 P18537 P18824 P23696 P36179 P36872 P51140 P54367 P91667 Q86BR9 Q95V09 Q9V407 Q9VVX3 Q9Y1T2	APC APC2 Apc Apc2 Axn CK1 CK1-gamma CK1[[gamma]] CK1gamma CKI CKI-related CKIgamma CkIalpha D-APC D-APC2 Dm APC2 Dmel\CG6193 Dmel\CG6963 E-APC E-APC dAPC2 Gish Hrr25 NEST:bs27c08 PP2A Pp2A-28D Pp2A-29B Pp2A-85F Spider aar anon-WO0118547.425 apc2 arm arr d-APC2 dAPC2 dAPC2/E-APC dApc2 dapc2 dbt dco dsh e-apc fz fz2 gish gsk3 ms(3)89B mts sgg spider tws wg zw3
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks	AT16033p DNA repair protein RAD50 Developmental protein eyes absent Double-strand break repair protein GEO06356p1 GH17761p Histone H2A Histone H2A Histone H2B Histone H4 Histone acetyltransferase Tip60 Nibrin Ovarian-specific serine/threonine-protein kinase Lok PAX transcription activation domain interacting protein Polyubiquitin Probable E3 ubiquitin-protein ligase HERC2 Probable lysine-specific demethylase 4A Probable lysine-specific demethylase 4B Serine/threonine-protein kinase ATM Suppressor of variegation 2-10, isoform I Tyrosine-protein kinase Abl Ubiquitin-conjugating enzyme E2 N Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein p53 protein long form variant 1	A1Z7P5 O61267 P00522 P02283 P0CG69 P15357 P35128 P84040 P84051 Q05201 Q4AB57 Q5EAK6 Q8IMZ4 Q960X4 Q9V333 Q9V6L0 Q9VJS5 Q9VR91 Q9VRL1 Q9VT40 Q9VUB7 Q9W252 Q9W418 Q9XYZ4 R9PY16	16928 6754 ABL-1 Abl BG:DS01486.1 BcDNA:AT16033 CG10873 CG18282 CG31325 CG6532 CG8797 CLOT2057 CR11700 CR32744 D-p53 DMP53 DPIAS Dash Dm-P53 DmP53 DmPias DmUEV DmUb DmUbi-p5E DmUev1a Dmel\CG10640 Dmel\CG11700 Dmel\CG16928 Dmel\CG32133 Dmel\CG32744 Dmel\CG33336 Dmel\CG33853 Dmel\CG33856 Dmel\CG33859 Dmel\CG3473 Dmel\CG6754 Dmel\CG8068 Dmp53 Dnbs1 Dp53 Dpias ESTS:143G11T ESTS:199A6T H2a H4 H4r HERC2 His2A His2A:CG31618 His2A:CG33808 His2A:CG33814 His2A:CG33817 His2A:CG33820 His2A:CG33823 His2A:CG33826 His2A:CG33829 His2A:CG33832 His2A:CG33835 His2A:CG33838 His2A:CG33841 His2A:CG33844 His2A:CG33847 His2A:CG33850 His2A:CG33853 His2A:CG33856 His2A:CG33859 His2A:CG33862 His2A:CG33865 His2B His2B:CG17949 His2B:CG33868 His2B:CG33870 His2B:CG33872 His2B:CG33874 His2B:CG33876 His2B:CG33878 His2B:CG33880 His2B:CG33882 His2B:CG33884 His2B:CG33886 His2B:CG33888 His2B:CG33890 His2B:CG33892 His2B:CG33894 His2B:CG33896 His2B:CG33898 His2B:CG33900 His2B:CG33902 His2B:CG33904 His2B:CG33906 His2B:CG33908 His2B:CG33910 His4 His4:CG31611 His4:CG33869 His4:CG33871 His4:CG33873 His4:CG33875 His4:CG33877 His4:CG33879 His4:CG33881 His4:CG33883 His4:CG33885 His4:CG33887 His4:CG33889 His4:CG33891 His4:CG33893 His4:CG33895 His4:CG33897 His4:CG33899 His4:CG33901 His4:CG33903 His4:CG33905 His4:CG33907 His4:CG33909 His4r Kdm4A Kdm4B MRE11 Mre11 NBS NBS1 Nbs Nbs1 P53 PIAS PTIP Ptip RpS27A SU(VAR)2-10 Su(Var)2-10 Su(var)-10 Su(var)2-10 Su-var(2)10 Suvar(2)10 Tip60 UB UB3-D UBI-F80 UEV UEV1A UEV1a Ub UbcD3 Ube2N Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Uev1A Uev1a ZIMP ZimpA ZimpB anon-sts41 atm ben cg3473 cli dPIAS dUEV1A dUEV1a dUev1A dmP53 dmp53 dp53 dpias eya i184 l(2)03697 l(3)67BDp l(3)67BDr l(3)e77A1 lok mre11 nbs nbs1 p53 pias poly-ub prac ptip rad50 tefu uev1a zimp
Receptor-type tyrosine-protein phosphatases	AT31531p Chaoptin Liprin-alpha, isoform E Protein singed wings 2 Protein windpipe Tyrosine-protein phosphatase Lar protein-tyrosine-phosphatase	A1ZAB3 M9PCD4 P12024 P16621 Q8SXT3 Q9VU88 Q9W266	CHT CT18044 DLiprin DLiprin-alpha DPTP52F Dliprin-alpha Dmel\CG10743 Dmel\CG11199 Dmel\CG18243 LIP LIP.1 LIP1 LPR Lar Liprin Liprin-alpha Liprin-beta PTP52F Ptp52F Ptp52F-RB chp lip-alpha liprin liprin-alpha lpr oos ptp52F swi2 wdp
Reactions specific to the complex N-glycan synthesis pathway	Alpha-(1,6)-fucosyltransferase Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Alpha-mannosidase 2 Alpha-mannosidase Carbohydrate sulfotransferase Carbohydrate sulfotransferase Carbohydrate sulfotransferase Glycoprotein 3-alpha-L-fucosyltransferase A Putative alpha-L-fucosidase	Q24451 Q8IRG5 Q961U0 Q9VF33 Q9VJG5 Q9VMS3 Q9VTJ4 Q9VUL9 Q9VYV5	152851_at CG34313-RA CG4826 DM-GII.2 Dmel\CG13937 Dmel\CG14024 Dmel\CG31743 Dmel\CG4606 Dmel\CG7921 FucT6 FucTA Fuca GM GTD#24/1 GlcNAc-TII GlcNAcT2 GmII MGAT2 Man'ase ManIIb Mgat2 alpha-M-II alpha-Man-II b alpha-Man-IIa alpha-Man-IIb alpha-Man-IIb-RA d4ST1 d4ST2 dC4ST dGMIIb dMGAT2	G70323CJ G82576YO
RUNX3 regulates p14-ARF	Cyclin D, isoform D Histone deacetylase 4, isoform G Homeotic protein female sterile IP14417p1 Maverick Protein big brother Protein decapentaplegic Protein lozenge Ras-like protein 1 Runt related A, isoform D Runt related B Segmentation protein Runt histone acetyltransferase	M9MS40 M9PHQ2 M9PI08 P07713 P08646 P13709 P22814 Q24040 Q7KUZ5 Q9V4E6 Q9VCG6 Q9VRA9 Q9W349	Bgb CBP CBP/p300 CBP_ CDI3 CG13597-RA CG1379 CG15321 CG15453 CG15454 CG15455 CYCD Cbp Cdi3 Crbp Cyc D Cyc-D CycD DHDAC4 DmcycD Dmel\CG13597 Dmel\CG15319 Dmel\CG1770 Dmel\CG1901 Dmel\CG34145 Dmel\CG42267 Dmel\CG9096 GC1770 HDAC HDAC4 HDAC4a MAV Mav Nej Nejire P300 Ras1 Ras85D RunxA RunxB TGF-b anon-WO0147981.11 anon-WO03040301.89 cbp cdi3 cycD cyclin D cyclinD dCBP dCycD dHDAC4 dKAT3 dmCBP dmHDA405 dpp fs(1)h fsh hdac4 l(1)G0112 l(1)G0350 l(1)G0470 lz mav nej nej CBP p300 p300/CBP run tBRD-1 tBrd-1 tbrd-1
RUNX3 regulates CDKN1A transcription	Maverick Mothers against decapentaplegic homolog Mothers against decapentaplegic homolog Protein decapentaplegic Protein lozenge Runt related A, isoform D Runt related B Segmentation protein Runt Zinc finger protein 2 p53 protein long form variant 1	M9PI08 O62609 O96660 P07713 P22814 P28167 Q8IMZ4 Q9V4E6 Q9VRA9 Q9W349	CG10873 CG1379 CG15453 CG15454 CG15455 CG31325 D-p53 DMP53 DSMAD2 DSmad2 Dm-P53 DmP53 Dmel\CG1775 Dmel\CG1901 Dmel\CG2262 Dmel\CG33336 Dmel\CG34145 Dmel\CG42267 Dmp53 Dp53 E(zen)3 MAV MED Mav Med Medea P53 RunxA RunxB SMAD2 SMAD4 SMOX Sad Smad Smad2 Smad4 SmoX Smox TGF-b anon-EST:Posey121 dSMAD2 dSmad2 dSmad4 dmP53 dmp53 dp53 dpp dsmad2 l(1)G0348 l(3)11m-254 l(3)12m-137 l(3)SG36 l(3)SG70 l(3)XIIm137 lz mav med medea p53 prac run sad smad2 smad4 smox ted tmp zfh-2 zfh2
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes	Accessory gland protein Acp76A CG6687 protein Cathepsin L FI01422p GH10112p GH18514p IP10416p LD36817p MIP05602p Male accessory gland protein RE02548p RE27547p RH39096p SD11922p Serine protease inhibitor 27A Serine protease inhibitor 42Dd Serine protease inhibitor 88Ea Serpin 100A Serpin 28B, isoform A Serpin 28Da Serpin 28Db Serpin 28F Serpin 38F, isoform A Serpin 42Db, isoform C Serpin 42Dc, isoform A Serpin 43Aa Serpin 4 Serpin 85F Serpin domain-containing protein Uncharacterized protein	A1Z6I3 A1Z6R3 A1Z6R4 A1Z6V5 A1ZAU4 Q0E8V6 Q3HKQ3 Q4V3G2 Q7JV69 Q7JWX3 Q7K0S6 Q7K508 Q7K8Y5 Q7KA66 Q7YTY6 Q8SYY7 Q8SZF4 Q95029 Q9V3N1 Q9VA48 Q9VFC1 Q9VFC2 Q9VH46 Q9VII7 Q9VKY4 Q9VL44 Q9VLQ7 Q9VLV3 Q9VLZ8 Q9VVW1	6h1 Acp76A BEST:GH19547 BG642378 BG642378(6h1) CG12318 CG12551 CG14470 CG4804-RA CG4847-RD Cp1 CtsK2 CtsL2 CtsL4 Dmel\CG10913 Dmel\CG10956 Dmel\CG12172 Dmel\CG12807 Dmel\CG1342 Dmel\CG1857 Dmel\CG1859 Dmel\CG1865 Dmel\CG31902 Dmel\CG32203 Dmel\CG33121 Dmel\CG43366 Dmel\CG4804 Dmel\CG4847 Dmel\CG5367 Dmel\CG6347 Dmel\CG6687 Dmel\CG6717 Dmel\CG7722 Dmel\CG8137 Dmel\CG9334 Dmel\CG9453 Dmel\CG9454 Dmel\CG9455 Dmel\CG9460 NEC Nec SER1 SER2 SER3 Ser1 Ser2 Ser3 Serp2 Sp2 Sp3 Sp4 Sp6 Spn1 Spn100 Spn100A Spn2 Spn27A Spn28B Spn28Da Spn28Db Spn28F Spn3 Spn31A Spn38F Spn4 Spn42Da Spn42Db Spn42Dc Spn42Dd Spn42De Spn43 Aa Spn43A Spn43Aa Spn43Ab Spn43Ac Spn43Ad Spn47C Spn4A Spn5 Spn53F Spn55B Spn6 Spn7 Spn75F Spn85F Spn88Ea Spn88Eb anon-WO0118057.1 anon-WO0118057.2 anon-WO0118057.3 dSerp2 fs(2)50Ca nec sp-6 sp2 sp3 sp4 sp6 spn2 spn4 spn43Ab spn47C
RUNX1 regulates transcription of genes involved in differentiation of HSCs	26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 4 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory complex subunit p48A 26S proteasome regulatory complex subunit p50 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Beadex, isoform D Box A-binding factor CDK-activating kinase assembly factor MAT1 Chip, isoform B Cyclin-H Cyclin-dependent kinase 7 E3 ubiquitin-protein ligase Su(dx) FI19405p1 GATA-binding factor A GATA-binding factor C GATAe, isoform A GH11341p GH17761p Helix loop helix protein 3B Histone-lysine N-methyltransferase trithorax LD45860p Polyubiquitin Probable 26S proteasome non-ATPase regulatory subunit 3 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7-1 Proteasome subunit alpha type-7-1A Proteasome subunit alpha type-7-1B Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Proteasome subunit beta Protein big brother Protein daughterless Regulatory particle triple-A ATPase 4 Segmentation protein Runt Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein p53 protein long form variant 1 proteasome endopeptidase complex	A0AQH0 M9PI02 O18413 O76513 P0CG69 P11420 P12881 P15357 P18053 P20659 P22769 P22814 P25161 P26270 P40301 P48601 P52168 P52172 P55035 P91623 Q24040 Q24178 Q24216 Q27575 Q7K148 Q7KLV9 Q7KMP8 Q7KMQ0 Q7KPG8 Q7KVG9 Q8IMZ4 Q8INY4 Q8T915 Q95083 Q9V3G7 Q9V3H2 Q9V3P3 Q9V3P6 Q9V3V6 Q9V3Z4 Q9V405 Q9V436 Q9V5C6 Q9V637 Q9VF00 Q9VFS8 Q9VJJ0 Q9VKZ0 Q9VNA5 Q9VUJ1 Q9VW54 Q9VYG1 Q9W1S5 Q9W414 Q9W418 Q9W470 Q9W4X2 Q9XYN7 Q9XZJ4 Q9Y0H4 R9PY16	0718/06 1(2)05070 1341 142767_at 16916 17331 31742 3329 718/06 8392 ABF AT-1 B[[1]] B[[2]] BcDNA.GH12068 BcDNA:GH12068 BcDNA:LD21723 Bd Beta 2 subunit Beta-1 Beta-2 Beta-4 Beta-5 Bgb Bx CCNH CD 7 CDK7 CG10278-PA CG10548 CG10873 CG12096 CG15048 CG18282 CG31325 CG6500 CG9588 CHIP CR11700 CR32744 CT28749 Cdk7 Chi Chi-RB CycH D-p53 DLMO DMP53 DTS-7 DTS57 DTS7 DUG Dlmo Dm-P53 DmCDK7 DmCdk7 DmMO15 DmMo15 DmP53 DmREGgamma DmTBP-1 DmUb DmUbi-p5E Dm_Rpt1 Dm_Rpt3a Dm_Rpt4a Dm_Rpt4b Dm_Rpt5a Dm_Rpt5b Dmcdk7 Dmel\CG10230 Dmel\CG10278 Dmel\CG10370 Dmel\CG1100 Dmel\CG11700 Dmel\CG12161 Dmel\CG12323 Dmel\CG1341 Dmel\CG1591 Dmel\CG16916 Dmel\CG17331 Dmel\CG18341 Dmel\CG2655 Dmel\CG31742 Dmel\CG32744 Dmel\CG3319 Dmel\CG3329 Dmel\CG33336 Dmel\CG3455 Dmel\CG3924 Dmel\CG4157 Dmel\CG44425 Dmel\CG5034 Dmel\CG7405 Dmel\CG7614 Dmel\CG7762 Dmel\CG8392 Dmel\CG9868 Dmp42D Dmp48A Dmp48B Dmp53 Dox-A2 Dp53 DroSCL Dts7 EG:155E2.2 ESTS:143G11T ESTS:199A6T GATA-A GATAd GATAd-RA GATAe GC17331 Gata-c HLH3B HLH3b KMT2A LD08717 LDB LMO Ldb Lmo MAT1 Mat1 Mo15 Mov34 P26s4 P53 PI31 PROS-25 PROS-28.1 PROS-29 PROS-35 PROS-54 PROSbeta2 PSMB2 PSMB5 PSMD13 Pros b5 Pros beta4 Pros-beta-2 Pros-beta-5 Pros-beta-5R1 Pros25 Pros26.4 Pros26S Pros26S-RS6A Pros28.1 Pros28.1A Pros28.1B Pros29 Pros35 Pros45 Pros54 ProsMA5 Prosalpha1 Prosalpha2 Prosalpha3 Prosalpha4 Prosalpha4T1 Prosalpha4T2 Prosalpha5 Prosalpha6 Prosalpha7 Prosb4 Prosbeta Prosbeta 2 Prosbeta1 Prosbeta2 Prosbeta2R1 Prosbeta2R2 Prosbeta3 Prosbeta4 Prosbeta5 Prosbeta5R Prosbeta5R1 Prosbeta5R1-RA Prosbeta5R2 Prosbeta7 Psmb2 Ptd Q7KMQ0_DROME REG REGgamma RPN1 RPN5 RPT5 Rho RpS27A Rpn1 Rpn10 Rpn11 Rpn12 Rpn2 Rpn3 Rpn4 Rpn5 Rpn6 Rpn7 Rpn8 Rpn9 Rpn94 Rpt1 Rpt2 Rpt3 Rpt3-RA Rpt4 Rpt5 Rpt6 S10b S11 S14 S2 S6 S6' S6B S7 Su(dx) TBP-1 TBP7 Tbp-1 Tbp1 UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Ug anon-AE003657.1 anon-EST:fe1E6 anon-EST:fe1G6 anon-WO0118547.116 anon-WO0118547.90 anon-WO0153538.10 anon-WO0153538.8 anon-WO0153538.9 anon-sts41 b2 bHLHa20 beadex/dLMO beta 2 beta-1 beta-2 beta-4 beta-5 beta1 beta2 beta2R1 beta2R2 beta2_dm beta4 beta5 beta5R1 beta5R2 bx cdk-7 cdk7 chi chip dCdk7 dGATA-D dGATA-E dGATAd dGATAe dLDB/Chip dLMO dLdb dLmo dREG dREGgamma dReg dReggamma dRpn12 dRpt1 dRpt5 da dbeta5 dlmo dmP53 dmp53 dp53 dttg fliH grn hdp hdp-a hld l(1)G0052 l(1)G0114 l(1)G0227 l(1)G0345 l(2)04405 l(2)05070 l(2)05070-RA l(2)05643 l(2)43Ed l(2)k04405 l(3)04210 l(3)DTS7 l(3)S071806 l(3)S071806b p30 p39A p40[MO15] p42D p48A p48B p50 p53 p55 p97 pnr poly-ub prac prosbeta prosbeta1 prosbeta2 rpn1 rpn12 rpn5 rpn9 rpt3 run srp tbp-1 trx yip5
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function	Arginine methyltransferase 1 Arginine methyltransferase 2, isoform A Arginine methyltransferase 6 Arginine methyltransferase 8 Arginine methyltransferase 9 Box A-binding factor FI19405p1 GATA-binding factor A GATAe, isoform A HL01030p Histone H2A.v Histone H2A Histone H2A Histone H2B Histone H3.3A Histone H3.3B Histone H3 Histone H4 Histone acetyltransferase GCN5 Histone deacetylase HDAC1 Histone-lysine N-methyltransferase SETD1 Histone-lysine N-methyltransferase trithorax Histone-lysine N-methyltransferase trr Protein big brother Protein will die slowly Retinoblastoma-binding protein 5 homolog Segmentation protein Runt Set1/Ash2 histone methyltransferase complex subunit ASH2 Sin3A, isoform G Uncharacterized protein, isoform D Zinc finger protein ush histone acetyltransferase	A0A0B4K765 C0HL66 C0HL67 M9MS40 P02283 P02299 P08985 P20659 P22814 P52168 P52172 P84040 P84051 Q24040 Q4AB57 Q5LJZ2 Q8IRW8 Q8SX32 Q94517 Q94545 Q9V3J8 Q9VF00 Q9VFP8 Q9VFP9 Q9VGW7 Q9VKZ0 Q9VPH8 Q9VPQ6 Q9VQX9 Q9VTZ1 Q9W1H0 X2JB47	159A11T 27/3 97/15 ABF Ada4 Art1 Art2 Art6 Art8 Art9 Bgb CBP CBP/p300 CBP_ CG10278-PA CG15321 Cbp Cmi Crbp DART1 DART2 DART6 DART8 DART9 Dart Dart1 Dart2 Dart8 Dmel\CG10278 Dmel\CG15319 Dmel\CG16840 Dmel\CG32152 Dmel\CG33853 Dmel\CG33856 Dmel\CG33859 Dmel\CG3675 Dmel\CG4107 Dmel\CG5034 Dmel\CG5591 Dmel\CG6554 Dmel\CG8815 Dmel\CG9927 Dmel\CG9929 ES2-3 ESTS:159A11T EY2-9 GATA-A GATAd GATAd-RA GATAe GCN5 Gcn5 Gcn5/PCAF Gcn5/Pcaf H2AvD H2a H4 H4r HDAC1 His2A His2A:CG31618 His2A:CG33808 His2A:CG33814 His2A:CG33817 His2A:CG33820 His2A:CG33823 His2A:CG33826 His2A:CG33829 His2A:CG33832 His2A:CG33835 His2A:CG33838 His2A:CG33841 His2A:CG33844 His2A:CG33847 His2A:CG33850 His2A:CG33853 His2A:CG33856 His2A:CG33859 His2A:CG33862 His2A:CG33865 His2Av His2AvD His2B His2B:CG17949 His2B:CG33868 His2B:CG33870 His2B:CG33872 His2B:CG33874 His2B:CG33876 His2B:CG33878 His2B:CG33880 His2B:CG33882 His2B:CG33884 His2B:CG33886 His2B:CG33888 His2B:CG33890 His2B:CG33892 His2B:CG33894 His2B:CG33896 His2B:CG33898 His2B:CG33900 His2B:CG33902 His2B:CG33904 His2B:CG33906 His2B:CG33908 His2B:CG33910 His3 His3.3A His3.3B His3:CG31613 His3:CG33803 His3:CG33806 His3:CG33809 His3:CG33812 His3:CG33815 His3:CG33818 His3:CG33821 His3:CG33824 His3:CG33827 His3:CG33830 His3:CG33833 His3:CG33836 His3:CG33839 His3:CG33842 His3:CG33845 His3:CG33848 His3:CG33851 His3:CG33854 His3:CG33857 His3:CG33860 His3:CG33863 His3:CG33866 His4 His4:CG31611 His4:CG33869 His4:CG33871 His4:CG33873 His4:CG33875 His4:CG33877 His4:CG33879 His4:CG33881 His4:CG33883 His4:CG33885 His4:CG33887 His4:CG33889 His4:CG33891 His4:CG33893 His4:CG33895 His4:CG33897 His4:CG33899 His4:CG33901 His4:CG33903 His4:CG33905 His4:CG33907 His4:CG33909 His4r KAT KAT2 KMT2A KMT2C LPT Lpt Nej Nejire P/CAF P300 PCAF Pcaf Rbbp5 Rpd3 SIN3 SIN3A Set1 Sin 3A Sin3 Sin3A Sin3a anon-WO0147981.11 anon-WO0172774.89 anon-WO03040301.89 ash2 cbp cg5591 cmi dART8 dCBP dGATA-D dGATA-E dGATAd dGATAe dGCN5 dGCN5 HAT dGcn5 dGcn5i dKAT2 dKAT3 dPCAF dSin3 dSin3A dart1 dmCBP dmGCN5 dmHAG401 gcn5 l(1)3Ad l(1)G0112 l(1)G0350 l(1)G0470 l(1)zw8 l(2)08269 l(2)k02703 l(2)k05415 l(2)k09715 ld lpt nej nej CBP p/CAF p300 p300/CBP pCAF pnr run sin3 sin3A sin3a sni3 srp trr trx ush wds
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known	ATP-dependent helicase brm Brahma associated protein 111kD Brahma associated protein 155 kDa Brahma associated protein 55kD Brahma-associated protein of 60 kDa E3 ubiquitin-protein ligase RING1 GH08712p Homeodomain interacting protein kinase, isoform D Polybromo Polycomb group protein Pc Polycomb group protein Psc Polycomb protein Scm Polyhomeotic distal, isoform A Polyhomeotic-proximal chromatin protein Protein big brother Segmentation protein Runt Trithorax group protein osa histone acetyltransferase	A0A6M3Q6U2 M9MS40 P22814 P25439 P26017 P35820 P39769 Q24040 Q24090 Q7K012 Q8IN94 Q9VB08 Q9VC36 Q9VF03 Q9VHA0 Q9VYG2 Q9W384 Q9W523	ARP4 Arp4 BAF180 BAF53 BAF57 BAP 111 BAP111 BAP155 BAP45 BAP47 BAP55 Baf53 Bap111 Bap180 Bap55 Bap60 Bgb CBP CBP/p300 CBP_ CG15321 CG4275 Cbp Crbp DALAO DHIPK2 DROZFP Dalao Dmel\CG1064 Dmel\CG11375 Dmel\CG15319 Dmel\CG17090 Dmel\CG18740 Dmel\CG3895 Dmel\CG6546 Dmel\CG7055 E(E2F)3B EG:BACN25G24.3 HIPK HIPK2 Hipk MOIRA MOR MOR/BAP155 Moi Moira Mor Nej Nejire P300 PB PH PH-d PHD POLYBROMO Pb Pc Ph Ph-d PhD Polybromo Psc SNR1 Sce Scm Snr Snr-1 Snr1 Snr1/BAP45 Swi3D anon-EST:Liang-1.83 anon-WO0140519.158 anon-WO0147981.11 anon-WO03040301.89 baf180 bap180 bap55 brm cbp clone 1.83 dCBP dKAT3 dalao dhipk2 dmCBP dmMOIRA eld hipK hipk l(1)G0112 l(1)G0350 l(1)G0470 l(3)01319 l(3)89B1 mor nej nej CBP osa p300 p300/CBP ph ph-D ph-d ph-p ph[D] ph[d] phd phm polybromo run snr snr-1 snr1
ROS and RNS production in phagocytes	Nitric oxide synthase Probable V-type proton ATPase subunit d 2 Protein Malvolio V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase catalytic subunit A isoform 2 V-type proton ATPase subunit B V-type proton ATPase subunit C V-type proton ATPase subunit D 1 V-type proton ATPase subunit E V-type proton ATPase subunit F 1 V-type proton ATPase subunit G V-type proton ATPase subunit H V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 1 V-type proton ATPase subunit V-type proton ATPase subunit V-type proton ATPase subunit V-type proton ATPase subunit	A1ZBF7 P23380 P31409 P49283 P54611 Q24583 Q27331 Q27571 Q9V3J1 Q9V7D2 Q9V7N5 Q9VCQ3 Q9VE75 Q9VE77 Q9VEQ6 Q9VFE3 Q9VKF6 Q9VP18 Q9VZE9 Q9VZG7 Q9W4P5 Q9XZ10 Q9XZH6	ATP6V0M9.7-2 BcDNA:AT03238 BcDNA:LD21248 BcDNA:LD21735 CG7625-RA CG7679 Dmel\CG11589 Dmel\CG12602 Dmel\CG1268 Dmel\CG14909 Dmel\CG1709 Dmel\CG18617 Dmel\CG30329 Dmel\CG7007 Dmel\CG7625 Dmel\CG7678 Mvl Nos V0 V0a V0c V100 V100-1 V100-2 VHA VHAA2 Vha M9.7-2 Vha100 Vha100-1 Vha100-2 Vha100-3 Vha100-4 Vha100-5 Vha100-5-RA Vha13 Vha14 Vha14-1 Vha16 Vha16-1 Vha26 Vha36 Vha36-1 Vha44 Vha55 Vha68-2 VhaAC39 VhaAC39-1 VhaAC39-2 VhaM9.7-1 VhaM9.7-2 VhaM9.7-3 VhaM9.7-4 VhaM9.7-a VhaM9.7-b VhaM9.7-c VhaM9.7-d VhaPPA1 VhaPPA1-1 VhaSFD anon-WO0118547.296 anon-WO0118547.551 l(2)06072 v0a1 v100 vha vha100-1 vha100-2 vha100-3 vha100-4 vha100-5 vhaM9.2-1 vhaM9.2-2 vhaM9.7-1 vhaM9.7-2 vhaM9.7-3 vhaM9.7-4 vhaM9.7-b vhaPPA1-1
RNA polymerase II transcribes snRNA genes	Cyclin K, isoform A Cyclin-T Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Integrator complex subunit 10 Integrator complex subunit 11 Integrator complex subunit 12 Integrator complex subunit 14 Integrator complex subunit 1 Integrator complex subunit 2 Integrator complex subunit 3 Integrator complex subunit 4 Integrator complex subunit 5 Integrator complex subunit 6 Integrator complex subunit 7 Integrator complex subunit 8 Integrator complex subunit 9 LD11480p LD16387p LD18233p Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PSEA-binding protein 45kD Phosphorylated adapter RNA export protein Platelet-activating factor acetylhydrolase IB subunit beta homolog Protein asunder Protein nubbin Protein suppressor of sable RNA polymerase II elongation factor Ell RNA polymerase II subunit A C-terminal domain phosphatase SSU72 RPB5 homolog SOSS complex subunit B homolog Serrate RNA effector molecule homolog Sp1-like factor for pairing sensitive-silencing, isoform B TATA-box-binding protein TBP-related factor Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription factor btd Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 8 Transcription initiation factor TFIID subunit 9 Uncharacterized protein, isoform A Uncharacterized protein, isoform C snRNA-activating protein complex subunit 3	A0A0B4KHC8 A1Z7P3 A1Z9W4 A1ZAK1 O17432 O96433 O96880 O96881 O97183 P04052 P08266 P20227 P22293 P29052 P31368 P36958 P41900 P49846 P49847 P49906 P52654 P52656 Q05913 Q24216 Q24266 Q24320 Q27272 Q27896 Q6IGE3 Q7JUY8 Q7JZF5 Q7K4N3 Q7PLS8 Q95TS5 Q961D1 Q9TVQ5 Q9V3L6 Q9V460 Q9V9K7 Q9VAH9 Q9VBB3 Q9VC49 Q9VCN9 Q9VEA5 Q9VEX5 Q9VF25 Q9VFB5 Q9VFS6 Q9VHX0 Q9VIP1 Q9VJE4 Q9VM17 Q9VNZ3 Q9VPY0 Q9VT41 Q9VT91 Q9VW51 Q9VWE4 Q9VWY6 Q9VX31 Q9VXP4 Q9VZM7 Q9W039 Q9W1C5 Q9W3E1 Q9W485 X2JAA3	152117_at 38B.15 Ars2 Asun BEST:CK01830 BEST:GH22533 BEST:LD28511 BG:DS00941.10 BTF1 CD 7 CDK7 CDK9 CG11508 CG42516-RA CG5181 CG6572 Can Cbp20 Cbp80 Cdk7 Cdk9 CycK CycT D-rpII33 DMPBP49 DmCDK7 DmCdk7 DmMO15 DmMo15 DmP-TEFb DmPBP DmPBP45 DmPBP49 DmPBP95 DmRPB5 DmSNAP190 DmSNAP43 DmSNAP50 DmSNAPc Dmcdk7 Dmel\CG10228 Dmel\CG10415 Dmel\CG10756 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG14216 Dmel\CG15160 Dmel\CG15218 Dmel\CG2702 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42515 Dmel\CG4448 Dmel\CG5179 Dmel\CG5669 Dmel\CG6577 Dmel\CG7885 Dmel\CG8069 Dmel\CG9018 Dmel\CG9597 E[[S]] Ell FBgn0035318 Inr-a IntS1 IntS10 IntS11 IntS12 IntS13 IntS14 IntS2 IntS3 IntS4 IntS5 IntS6 IntS7 IntS8 IntS9 Mat89Bb Mo15 OCT1 P-TEF P-TEFb PCF11 POU-19 PTefb Paf-AHalpha Pbp45 Pbp49 Pbp95 Pcf11 Pcf11-RA Phax Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SNAP43 Spps Spt5 Ssu72 Su(Tpl) TAF TAF13 TAF18 TAF30-BETA TAF40 TAF5 TAF5L TAF80 TAFII40 TAF[[II]] TAF[[II]]18 TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TWN Taf11 Taf13 Taf18 Taf5 Taf5L Taf6 Taf60 Taf8 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Trf WDA WFA WSB-1 WSB1 Wda anon-WO0118547.146 anon-WO0118547.359 br17 btd can cdk-7 cdk7 cdk9 cycK dCdk7 dPHAX dPcf11 dRpb7 dSsu72 dTAF5L dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda defl dmTAF5b e(y)1 l(1)G0060 l(1)G0095 l(2)34Dg l(2)br17 l(2)k05605 l(2)k08015 l34Dg nub omd ovary2 p40[MO15] pcf11 pdm-1 pds pol II polII prod rpII33 rpb3 spt4 su(s) su(sable) taf13 taf5L wda
RNA Polymerase II Transcription Termination	ATP-dependent RNA helicase WM6 Cleavage and polyadenylation specificity factor 73 Cleavage and polyadenylation specificity factor subunit 1 Cleavage and polyadenylation specificity factor subunit 4 Cleavage and polyadenylation specificity factor subunit 5 Cleavage and polyadenylation specificity factor subunit 6 Cleavage stimulation factor 50 kDa subunit Cleavage stimulation factor 64 kD subunit Eukaryotic initiation factor 4A-III FI03704p FI04407p FI05704p FI07663p FI13061p FI21285p1 Factor interacting with poly(A) polymerase 1 Histone RNA hairpin-binding protein Hpr1 LD11480p LD13921p LD21931p LD23870p LD24014p LD24793p LD29830p LD31448p LD32469p LD35981p LD39136p LD40489p Lsm10 Molting defective, isoform D Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Polyadenylate-binding protein 2 Pre-mRNA-splicing factor Slu7 Probable cleavage and polyadenylation specificity factor subunit 2 Probable small nuclear ribonucleoprotein E Probable small nuclear ribonucleoprotein G Protein CASC3 Protein CLP1 homolog Protein mago nashi Protein suppressor of forked RE19438p RNA helicase RNA-binding protein 1 RNA-binding protein 8A Serine/arginine-rich splicing factor x16 Small nuclear ribonucleoprotein F Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein-associated protein B Splicing factor U2AF 50 kDa subunit Splicing factor U2af 38 kDa subunit Symplekin THO complex protein 7 THO complex subunit 2 THO complex subunit 5 THO complex subunit 6 polynucleotide adenylyltransferase	A0A0B4K7S6 A0A0B4KG96 A0A0B4KH64 A1Z802 A1Z8C4 A1Z9W4 E2QCS8 O44437 P25991 P49028 Q02427 Q05856 Q0E8G6 Q24297 Q24562 Q27268 Q7K1V0 Q7K284 Q7K4N3 Q7KNF2 Q8IRJ8 Q8MSU4 Q94535 Q9V3D6 Q9V3E7 Q9V3L6 Q9V3T8 Q9V3V0 Q9V3W7 Q9V535 Q9V726 Q9V9V0 Q9VAN6 Q9VAQ7 Q9VBR9 Q9VD52 Q9VE51 Q9VE52 Q9VGK1 Q9VGR8 Q9VHC0 Q9VHC8 Q9VHS8 Q9VHT2 Q9VL71 Q9VLV5 Q9VN31 Q9VNG2 Q9VNI8 Q9VPT8 Q9VSH4 Q9VTV1 Q9VU43 Q9VWQ3 Q9VWQ6 Q9VXE0 Q9VY54 Q9W1F4 Q9W1H3	154911_at 9G8 ALY ALYREF ASF ASF/SF2 Aly BcDNA:LD24014 BcDNA:LD24793 Btz CDC40 CDI12 CF I[[m]]25 CFI25 CFIm25 CG13620 CG1375 CG1405 CG15494 CG17822 CG17847 CG18259-RA CG18476-RA CG31312 CG33343 CG4263 CG5542 CG7483 CG9469 CPSF30 CPSF5 CStF 64 Cbp20 Cbp80 Cdi12 Clp Cpsf100 Cpsf160 Cpsf5 Cpsf6 Cpsf73 CstF 64 CstF-50 CstF-64 CstF-64-RA CstF50 CstF64 DEK DLsm11 DTS-3 Dbp25F DebB DmREF1 Dmel\CG10228 Dmel\CG10669 Dmel\CG1078 Dmel\CG1101 Dmel\CG1109 Dmel\CG11184 Dmel\CG11274 Dmel\CG12878 Dmel\CG12924 Dmel\CG12938 Dmel\CG16788 Dmel\CG18011 Dmel\CG18259 Dmel\CG18476 Dmel\CG2031 Dmel\CG2261 Dmel\CG31671 Dmel\CG32604 Dmel\CG34100 Dmel\CG3689 Dmel\CG4602 Dmel\CG5442 Dmel\CG6015 Dmel\CG6689 Dmel\CG6961 Dmel\CG6987 Dmel\CG7697 Dmel\CG8149 Dmel\CG9615 Dmel\CG9854 Dx16 EP764 EP784 FIP1 Fip1 HPR1 Hel25E Hpr1 Inr-a L(3)3[DTS] LSM11 Lsm10 Lsm11 Lsm11-RA Mld PAP PCF11 Pabp2 Pap Pcf11 Pcf11-RA Prp16 REF1 RNPS1 Rbp1 Rbp11 Ref1 RnpS1 Rnps1 SC-35 SC35 SF2 SNRPG SRM160 SRP54 SRSF1 SRm160 SRp30 SRp54 Sc35 Slbp Slu7 SmB SmD3 SmE SmF SmG Srp54 Srrm1 Ssb-c6a Sym TEX1 THO2 Tho2 Thoc1 Thoc2 Thoc3 U2af38 U2af50 UPF3 Upf3 Upf3-RB WDR33 WM6 Wdr33 Y14 aly anon-EST:Liang-1.35 anon-EST:Liang-2.16 anon-EST:Posey284 anon-WO0118547.146 btz cbc cdi12 cg1101 cg1405 cg16788 cg5442 cg6961 cg6987 clone 1.35 clone 2.16 cpsf dASF dCstF64 dFip1 dHrg dLsm10 dLsm11 dPcf11 dSC35 dSF2/ASF dSRp30 dSRp54 dUPF3 dmCG6689 dmREF1 dmSF2/p28 dxl6 guf2 hel hpr1 hrg l(1)G0007 l(1)G0028 l(1)G0103 l(1)G0176 l(1)G0308 l(1)G0416 l(1)G0476 l(1)G0491 l(2)07619 l(2)k07619 l(2)k08015 l(3)02267 l(3)3[DTS] l(3)DTS3 macadamia mago mgn mld p28/SF2 p75 pcf11 prp16 prp17 ref1 rnps1 rox2 sc35 srp54 su(f) tex tex-RA tho2 thoc5 thoc6 thoc7 tsu upf3 wkl x16 xl6
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd
RNA Polymerase II Transcription Initiation And Promoter Clearance	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd
RNA Polymerase II Transcription Initiation	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd
RNA Polymerase II Transcription Elongation	AF4/FMR2 family member lilli Another transcription unit protein CDK-activating kinase assembly factor MAT1 Ctr9, isoform A Cyclin K, isoform A Cyclin-H Cyclin-T Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Ell-associated factor Eaf Elongin B Elongin-C FACT complex subunit Ssrp1 FACT complex subunit spt16 GEO11084p1 GH07456p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit Hyrax Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E RNA polymerase II elongation factor Ell RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RPB5 homolog Transcription elongation factor B polypeptide 3 Transcription elongation factor S-II Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription elongation factor SPT6 Uncharacterized protein, isoform B Uncharacterized protein	A8JV07 B7Z018 O17432 O44226 O76513 O96433 O97183 P04052 P08266 P20232 P36958 P41900 P92204 Q02870 Q05344 Q05913 Q24134 Q24216 Q24320 Q6IGE3 Q7JRJ1 Q7JWD6 Q7JZF5 Q7K0X3 Q7KPG8 Q7KVP9 Q86NP2 Q8IRG6 Q94546 Q960E8 Q961D1 Q9TVQ5 Q9V460 Q9VC49 Q9VCP0 Q9VEA5 Q9VFB5 Q9VHI1 Q9VJE4 Q9VN55 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VQI9 Q9VUR1 Q9VW51 Q9W147 Q9W420 Q9XZ19 Q9Y113	142767_at 152117_at 154538_at 21483550 AT-1 Atms Atu BG:DS00941.10 BcDNA:LD21537 BcDNA:RH71704 CCNH CD 7 CDK7 CDK9 CF5 CG14037 CG3039 CG6572 Cdc73 Cdk7 Cdk9 Ctr9 CycH CycK CycT D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmFcp1 DmMO15 DmMo15 DmP-TEFb DmRPB5 DmSII DmXPD Dmcdk7 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG11990 Dmel\CG12252 Dmel\CG15218 Dmel\CG2469 Dmel\CG2503 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG3909 Dmel\CG4204 Dmel\CG42373 Dmel\CG5041 Dmel\CG5179 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9291 Dmel\CG9433 Dmel\CG9915 Dmfcp1 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 Eaf Ell Elo-B EloA EloB EloC Elongin-B Elongin-C ElonginC Fcp1 Hyx MAT1 Mat1 Mo15 NELF-B NELF-D Nelf-A Nelf-E P-TEF P-TEFb PAF PAF1 PTefb Paf1 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SS2-1 SSL1 SSRP1 Ski8 Spt5 Spt6 Ssl1 Ssrp Su(Raf)2A Su(Tpl) TFB2 TFB4 TFB5 TFB5 (uORF) TFIIF30 TH1 TTDA TfIIFalpha TfIIFbeta TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB XPD XPD/ERCC2 Xpd anon-66Da anon-WO0118547.648 anon-WO0172774.113 anon-WO0172774.114 anon-WO0172774.116 atms br17 cdk-7 cdk7 cdk9 cg2469 cycK dCDC73 dCdk7 dCtr9 dElongin C dPaf1 dRpb7 dSki8 dre4 fcp1 hay hyx hyx/CDC73 l(2)00632 l(2)34Dg l(2)SH1279 l(2)SH1299 l(2)SH1520 l(2)SH2 1279 l(2)SH2 1520 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)01456 l(3)02466 l(3)E35 l(3)rK509 l34Dg lilli lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 spt16 spt4 ssl1 uORF xpd
RNA Polymerase II Promoter Escape	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd
RNA Polymerase II Pre-transcription Events	AF4/FMR2 family member lilli Another transcription unit protein Bip2 CDK-activating kinase assembly factor MAT1 Ctr9, isoform A Cyclin K, isoform A Cyclin-H Cyclin-T Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Ell-associated factor Eaf Elongin B Elongin-C FACT complex subunit Ssrp1 FACT complex subunit spt16 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit Hyrax LD16387p Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II elongation factor Ell RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription elongation factor B polypeptide 3 Transcription elongation factor S-II Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription elongation factor SPT6 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9 Uncharacterized protein, isoform B Uncharacterized protein	A8JV07 B7Z018 O17432 O44226 O76513 O96433 O96880 O96881 O97183 P04052 P08266 P20227 P20232 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 P92204 Q02870 Q05344 Q05913 Q24134 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JRJ1 Q7JWD6 Q7JZF5 Q7K0X3 Q7K4N3 Q7KPG8 Q7KVP9 Q86NP2 Q8IRG6 Q94546 Q960E8 Q961D1 Q9TVQ5 Q9V3L6 Q9V460 Q9V4D4 Q9VC49 Q9VCN9 Q9VCP0 Q9VEA5 Q9VFB5 Q9VHI1 Q9VHY5 Q9VIP1 Q9VJE4 Q9VN55 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VQI9 Q9VT91 Q9VUR1 Q9VW51 Q9W147 Q9W420 Q9XZ19 Q9XZT7 Q9Y113	142767_at 152117_at 154538_at 21483550 38B.15 AT-1 Atms Atu BG:DS00941.10 BIP2 BTF1 BcDNA:LD21537 BcDNA:RH71704 Bip2 CCNH CD 7 CDK7 CDK9 CF5 CG14037 CG3039 CG6572 Can Cbp20 Cbp80 Cdc73 Cdk7 Cdk9 Ctr9 CycH CycK CycT D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmFcp1 DmMO15 DmMo15 DmP-TEFb DmRPB5 DmSII DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG11990 Dmel\CG12252 Dmel\CG1276 Dmel\CG15218 Dmel\CG2009 Dmel\CG2469 Dmel\CG2503 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG3909 Dmel\CG4204 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG5179 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9291 Dmel\CG9433 Dmel\CG9915 Dmfcp1 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] Eaf Ell Elo-B EloA EloB EloC Elongin-B Elongin-C ElonginC Fcp1 Hyx MAT1 Mat1 Mo15 NELF-B NELF-D Nelf-A Nelf-E P-TEF P-TEFb PAF PAF1 PTefb Paf1 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SS2-1 SSL1 SSRP1 Ski8 Spt5 Spt6 Ssl1 Ssrp Su(Raf)2A Su(Tpl) TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TH1 TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-66Da anon-84Ec anon-WO0118547.648 anon-WO0172774.113 anon-WO0172774.114 anon-WO0172774.116 atms bip-II bip2 br17 can caz cdk-7 cdk7 cdk9 cg2469 cycK dBIP2 dCDC73 dCdk7 dCtr9 dElongin C dPaf1 dRpb7 dSki8 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b dre4 e(y)1 fcp1 hay hyx hyx/CDC73 i163 i31 l(2)00632 l(2)34Dg l(2)SH1279 l(2)SH1299 l(2)SH1520 l(2)SH2 1279 l(2)SH2 1520 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)01456 l(3)02466 l(3)E35 l(3)rK509 l34Dg lilli lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 spt16 spt4 ssl1 taf13 taf3 taf5L uORF wda xpd

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GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

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Summary

International Collaboration

Acknowledgements