GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 226 - 250 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▲ Organism GlyTouCan ID
PCP/CE pathway
  • ARHA
  • DAAM1
  • DVL1
  • DVL2
  • DVL3
  • FZD1
  • FZD3
  • FZD6
  • FZD7
  • PFN1
  • RAC2
  • RAC3
  • RHO12
  • RHOA
  • WNT1
  • WNT11
  • WNT4
  • WNT5A
Bos taurus (cattle)
RHOQ GTPase cycle
  • ARHGAP1
  • ARHGAP17
  • ARHGAP26
  • ARHGAP32
  • ARHGAP33
  • ARHGAP35
  • ARHGAP5
  • ARHGEF7
  • ARHGEF9
  • ARL13B
  • ASCT2
  • BORG1
  • BORG5
  • CAV1
  • CDC42
  • CDC42BPB
  • CDC42EP1
  • CDC42EP2
  • CDC42EP3
  • CDC42EP4
  • CEP2
  • CFTR
  • CPNE8
  • DEPDC1B
  • DIAPH3
  • DLC1
  • FNBP1
  • GIT1
  • GIT2
  • GJA1
  • GOPC
  • IQGAP1
  • IQGAP3
  • ITSN1
  • JUP
  • LAMTOR1
  • MPP7
  • OPHN1
  • PAK1
  • PAK2
  • PAK4
  • PLEKHG3
  • PREX1
  • RHOQ
  • SCRIB
  • SLC1A5
  • SLC4A7
  • SNAP23
  • SRGAP2
  • STEAP3
  • STOM
  • SYDE1
  • TFRC
  • TRIP10
  • VANGL1
  • WASL
  • WWP2
Bos taurus (cattle)
RHOH GTPase cycle
  • ARHGDIA
  • ARHGDIG
  • ASCT2
  • BRWD2
  • CAV1
  • CSK
  • DBT
  • ERP27
  • FAM91A1
  • GBAS
  • JUP
  • LAMTOR1
  • LCK
  • MTR
  • NIPSNAP2
  • NSFL1C
  • OSBPL11
  • PAK1
  • PAK2
  • PAK4
  • PAK5
  • PAK6
  • RALGAPA1
  • RHOH
  • ROCK1
  • ROCK2
  • SLC1A5
  • SLC4A7
  • STOM
  • TFRC
  • TMEM59
  • VANGL1
  • VCP
  • WDR11
  • ZAP70
Bos taurus (cattle)
Antimicrobial peptides
  • ARHGEF40
  • BPI
  • BPIFA1
  • BPIFA2A
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • BPIFB6
  • CATHL4
  • CLU
  • ELANE
  • LEAP2
  • LOC104968634
  • LOC112441508
  • LOC509956
  • LOC783267
  • LTF
  • LYZ1
  • LYZ2
  • LYZ3
  • PGLYRP
  • PGLYRP1
  • PGLYRP2
  • PGLYRP3
  • PGLYRP4
  • PGRP
  • PI3
  • PLA2G2A
  • PLUNC
  • PRSS2
  • PRTN3
  • PTP
  • RK6B
  • RNASE2
  • RNASE6
  • RNS6
Bos taurus (cattle)
GABA receptor activation
  • ARHGEF9
  • GABRA1
  • GABRA2
  • GABRA3
  • GABRA4
  • GABRA5
  • GABRA6
  • GABRB1
  • GABRB2
  • GABRB3
  • GABRG2
  • GABRQ
  • GABRR2
  • GABRR3
Bos taurus (cattle)
Glutamate Neurotransmitter Release Cycle
  • ARL6IP5
  • CPLX1
  • EAAT1
  • GLAST
  • GLAST1
  • GLS
  • GLS2
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • PRAF3
  • RAB3A
  • RIMS1
  • SLC17A7
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC38A2
  • SNAP25
  • SNAT2
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
  • VGLUT1
Bos taurus (cattle)
Glycosphingolipid catabolism
  • ARSA
  • ARSB
  • ARSE
  • ARSG
  • ARSH
  • ARSI
  • ARSK
  • ARSL
  • ASAH1
  • ASAH2
  • CTSA
  • ENPP7
  • GALC
  • GBA1
  • GBA2
  • GBA3
  • GLA
  • GLB1
  • GLB1L
  • GLB1L2
  • GM2A
  • HEXA
  • HEXB
  • M6PR
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • PSAP
  • SMPD1
  • SMPD3
  • SMPD4
  • STS
  • SUMF1
  • SUMF2
Bos taurus (cattle)
The activation of arylsulfatases
  • ARSA
  • ARSB
  • ARSE
  • ARSG
  • ARSH
  • ARSI
  • ARSK
  • ARSL
  • STS
  • SUMF1
  • SUMF2
Bos taurus (cattle)
CS/DS degradation
  • ARSB
  • BCAN
  • BGN
  • CSPG2
  • CSPG4
  • CSPG5
  • DCN
  • HEXA
  • HEXB
  • HYAL1
  • HYAL3
  • IDS
  • IDUA
  • NCAN
  • VCAN
Bos taurus (cattle)
RET signaling
  • ARTN
  • DOK1
  • DOK2
  • DOK4
  • DOK5
  • DOK6
  • FRS2
  • GAB1
  • GAB2
  • GDNF
  • GFRA1
  • GFRA2
  • GFRA3
  • GFRA4
  • GRB10
  • GRB2
  • GRB7
  • IRS2
  • MAPK7
  • NRTN
  • PDLIM7
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PLCG1
  • PRKACA
  • PRKACB
  • PTPN11
  • RAP1GAP
  • RET
  • SHANK3
  • SHC1
  • SHC3
  • SOS1
  • SRC
Bos taurus (cattle)
Amino acid transport across the plasma membrane
  • ASCT2
  • B0AT2
  • LAT4
  • NTT73
  • ORNT3
  • SATT
  • SLC16A10
  • SLC1A4
  • SLC1A5
  • SLC25A29
  • SLC36A1
  • SLC36A2
  • SLC36A4
  • SLC38A1
  • SLC38A2
  • SLC38A3
  • SLC38A4
  • SLC38A5
  • SLC3A1
  • SLC3A2
  • SLC43A1
  • SLC43A2
  • SLC6A15
  • SLC6A18
  • SLC6A19
  • SLC6A20
  • SLC6A6
  • SLC7A1
  • SLC7A10
  • SLC7A11
  • SLC7A3
  • SLC7A5
  • SLC7A6
  • SLC7A7
  • SLC7A8
  • SLC7A9
  • SNAT2
  • SNAT5
Bos taurus (cattle)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • B4GALNT2
  • UMOD
Bos taurus (cattle)
Formation of the beta-catenin:TCF transactivating complex
  • ASH2L
  • BAF190A
  • BCL9
  • BCL9L
  • BRG1
  • CDC73
  • CREBBP
  • CTNNB1
  • EP300
  • H2AC12
  • H2AC18
  • H2AC21
  • H2AC6
  • H2AJ
  • H2AV
  • H2AZ2
  • H2B
  • H2BC26
  • H2BC5
  • H3-3A
  • H3-3B
  • H3F3A
  • H3F3B
  • HDAC1
  • HIST1H2BI
  • KAT5
  • LEF1
  • LEO1
  • LOC100297725
  • LOC528006
  • MEN1
  • PYGO1
  • RBBP5
  • RUVBL1
  • SMARCA4
  • SNF2B
  • SNF2L4
  • TCF7
  • TCF7L1
  • TCF7L2
  • TERT
  • TLE1
  • TLE2
  • TLE3
  • TLE4
  • TRRAP
Bos taurus (cattle)
Aspartate and asparagine metabolism
  • ASNS
  • ASPA
  • FOLH1B
  • GADL1
  • GOT1
  • GOT2
  • NAALAD2
  • SLC25A12
Bos taurus (cattle)
TFAP2 (AP-2) family regulates transcription of growth factors and their receptors
  • ATAD2
  • CGA
  • ESR
  • ESR1
  • LHB
  • NR3A1
Bos taurus (cattle)
Cilium Assembly
  • ATAT1
  • HDAC6
  • MEC17
Bos taurus (cattle)
ATF6 (ATF6-alpha) activates chaperones
  • ATF6
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
ATF6B (ATF6-beta) activates chaperones
  • ATF6B
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
Receptor Mediated Mitophagy
  • ATG12
  • ATG5
  • CK2A1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • FUNDC1
  • MAP1ALC3
  • MAP1LC3
  • MAP1LC3A
  • MAP1LC3B
  • PGAM5
  • SRC
  • ULK1
Bos taurus (cattle)
Stabilization of p53
  • ATM
  • CHEK2
  • MDM2
  • TP53
Bos taurus (cattle)
Autodegradation of the E3 ubiquitin ligase COP1
  • ATM
  • COP1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TP53
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Ion transport by P-type ATPases
  • ATP10A
  • ATP10B
  • ATP10D
  • ATP11A
  • ATP11B
  • ATP11C
  • ATP12A
  • ATP13A1
  • ATP13A2
  • ATP13A4
  • ATP13A5
  • ATP1A1
  • ATP1A2
  • ATP1A3
  • ATP1A4
  • ATP1B1
  • ATP1B2
  • ATP1B3
  • ATP2A1
  • ATP2A2
  • ATP2A3
  • ATP2B1
  • ATP2B2
  • ATP2B3
  • ATP2B4
  • ATP2C1
  • ATP2C2
  • ATP4A
  • ATP4B
  • ATP8A1
  • ATP8A2
  • ATP8B1
  • ATP8B2
  • ATP8B3
  • ATP8B4
  • ATP9A
  • ATP9B
  • CALM
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • FXYD1
  • FXYD2
  • FXYD4
  • FXYD6
  • FXYD7
  • PLM
  • PLN
  • SPCA
  • SRI
Bos taurus (cattle)
Basigin interactions
  • ATP1B1
  • ATP1B2
  • ATP1B3
  • BSG
  • CAV1
  • ITGA3
  • ITGA6
  • ITGB1
  • LOC112441463
  • MAG
  • PPIA
  • PPIL2
  • SLC16A1
  • SLC16A3
  • SLC16A8
  • SLC3A2
  • SLC7A10
  • SLC7A11
  • SLC7A5
  • SLC7A6
  • SLC7A7
  • SLC7A8
  • SLC7A9
  • SPN
Bos taurus (cattle)
Cristae formation
  • ATP5C
  • ATP5C1
  • ATP5D
  • ATP5E
  • ATP5F
  • ATP5F1
  • ATP5F1A
  • ATP5F1B
  • ATP5F1C
  • ATP5F1D
  • ATP5F1E
  • ATP5G1
  • ATP5G3
  • ATP5H
  • ATP5I
  • ATP5J
  • ATP5J2
  • ATP5MC1
  • ATP5MC2
  • ATP5MC3
  • ATP5ME
  • ATP5MF
  • ATP5MG
  • ATP5O
  • ATP5PB
  • ATP5PD
  • ATP5PF
  • ATP5PO
  • ATP5S
  • ATP6
  • ATP8
  • ATPASE6
  • ATPASE8
  • ATPW
  • DMAC2L
  • MT-ATP6
  • MT-ATP8
  • MTATP6
  • MTATP8
Bos taurus (cattle)
Formation of ATP by chemiosmotic coupling
  • ATP5C
  • ATP5C1
  • ATP5D
  • ATP5E
  • ATP5F
  • ATP5F1
  • ATP5F1A
  • ATP5F1B
  • ATP5F1C
  • ATP5F1D
  • ATP5F1E
  • ATP5G1
  • ATP5G3
  • ATP5H
  • ATP5I
  • ATP5J
  • ATP5J2
  • ATP5MC1
  • ATP5MC2
  • ATP5MC3
  • ATP5ME
  • ATP5MF
  • ATP5MG
  • ATP5O
  • ATP5PB
  • ATP5PD
  • ATP5PF
  • ATP5PO
  • ATP5S
  • ATP6
  • ATP8
  • ATPASE6
  • ATPASE8
  • ATPW
  • DMAC2L
  • MT-ATP6
  • MT-ATP8
  • MTATP6
  • MTATP8
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024