GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
G2/M Checkpoints
  • GTSE1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TP53
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Acrosome Reaction and Sperm:Oocyte Membrane Binding
  • ACR
  • CD9
  • IZUMO1
  • IZUMO2
  • IZUMO3
  • IZUMO4
Bos taurus (cattle)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
  • ECSIT
  • MAP3K1
  • TRAF6
Bos taurus (cattle)
Signaling by CSF3 (G-CSF)
  • CSF3
  • CSF3R
  • GAB2
  • GCSF
  • GRB2
  • JAK1
  • JAK2
  • KRAS
  • LYN
  • PTPN11
  • SHC1
  • SRC
  • SYK
  • TYK2
Bos taurus (cattle)
HDL clearance
  • AMN
  • APOA1
  • CUBN
  • HDLBP
  • SCARB1
Bos taurus (cattle)
Degradation of AXIN
  • AXIN1
  • AXIN2
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RNF146B
  • RPS27A
  • SMURF2
  • SUG1
  • TNKS
  • TNKS2
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes
  • CTSK
  • CTSL
  • CTSL1
  • SERPINB13
Bos taurus (cattle)
Negative regulation of the PI3K/AKT network
  • PTEN
Bos taurus (cattle)
Assembly of the pre-replicative complex
  • ANAPC1
  • ANAPC10
  • ANAPC11
  • ANAPC15
  • ANAPC16
  • ANAPC2
  • ANAPC4
  • ANAPC5
  • ANAPC7
  • ANAPC8
  • CDC16
  • CDC23
  • CDC26
  • CDC27
  • CDT1
  • FZR1
  • GMNN
  • MCM2
  • MCM3
  • MCM4
  • MCM5
  • MCM6
  • MCM7
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBCH10
  • UBE2C
  • UBE2D1
  • UBE2E1
  • UBE2S
Bos taurus (cattle)
FGFR2c ligand binding and activation
  • AFGF
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6
  • FGF6A
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • Fgf4
  • HBGF-1
Bos taurus (cattle)
Attachment of GPI anchor to uPAR
  • GPAA1
  • PGAP1
  • PIGK
  • PIGS
  • PIGT
  • PIGU
  • PLAUR
Bos taurus (cattle)
Dectin-1 mediated noncanonical NF-kB signaling
  • CHUK
  • CUL1
  • FBXW11
  • IKKA
  • MAP3K14
  • NFKB2
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RELB
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA3
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC12
  • UBCEP1
  • UBCEP2
  • UBE2M
Bos taurus (cattle)
Downstream TCR signaling
  • BCL10
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CARD11
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • CDC34
  • CHUK
  • CUL1
  • DYB
  • FBXW11
  • HLA-DRA
  • IKBKB
  • IKBKG
  • IKKA
  • INPP5D
  • LCK
  • LOC100848815
  • MALT1
  • MAP3K7
  • NEMO
  • NFKB1
  • NFKBIA
  • PDPK1
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PRKCQ
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • PTEN
  • RELA
  • RIPK2
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TAB2
  • TRAF6
  • TRAP2
  • TRAT1
  • TRAV29-1
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC4
  • UBCEP1
  • UBCEP2
  • UBCH4
  • UBCH5B
  • UBE2D1
  • UBE2D2
  • bIkBa
Bos taurus (cattle)
IFNG signaling activates MAPKs
  • ERK2
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKM1
Bos taurus (cattle)
Generation of second messenger molecules
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CD101
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • DYB
  • FYB
  • FYB1
  • GRAP2
  • HLA-DRA
  • ITK
  • LAT
  • LCK
  • LCP2
  • LOC100848815
  • NCK1
  • PAK1
  • PAK2
  • PAK3
  • PLCG1
  • PLCG2
  • TRAV29-1
  • ZAP70
Bos taurus (cattle)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM
  • CAMKMT
  • CNCG
  • CNCG1
  • CNGA1
  • CNGB1
  • FNTA
  • FNTB
  • GCAP1
  • GNAT1
  • GNB5
  • GNGT1
  • GRK1
  • GRK4
  • GRK7
  • GUCA1
  • GUCA1A
  • GUCA1B
  • GUCY2D
  • GUCY2F
  • LOC786620
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEG
  • PPEF1
  • R9AP
  • RCV1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHOK
  • SAG
Bos taurus (cattle)
Neurexins and neuroligins
  • CASK
  • DLG3
  • DLG4
  • DLGAP1
  • DLGAP3
  • DLGAP4
  • E41P
  • EPB41
  • EPB41L1
  • EPB41L2
  • EPB41L3
  • EPB41L5
  • GRM1
  • GRM5
  • HOMER1
  • HOMER2
  • HOMER3
  • LRRTM1
  • LRRTM2
  • LRRTM3
  • LRRTM4
  • NLGN1
  • NLGN2
  • NLGN3
  • NLGN4X
  • NRXN3
  • SHANK1
  • SHANK3
  • SORBS2
Bos taurus (cattle)
Surfactant metabolism
  • ABCA3
  • ADA2
  • ADGRF5
  • ADORA2A
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • CCDC59
  • CD163L1
  • CKAP4
  • CTSH
  • GATA6
  • LMCD1
  • LOC101907335
  • LOC751811
  • LOC786796
  • NAPSA
  • P2RY2
  • PGA5
  • SFTP3
  • SFTP4
  • SFTPA1
  • SFTPB
  • SFTPC
  • SFTPD
  • SLC34A1
  • TAP26
  • TTF1
  • WC-7
  • WC1
  • WC1-12
  • WC1.3
  • ZDHHC2
Bos taurus (cattle)
Interleukin-6 signaling
  • CBL
  • IL6
  • IL6R
  • IL6ST
  • JAK1
  • JAK2
  • PTPN11
  • SOCS3
  • STAT1
  • STAT3
  • TYK2
Bos taurus (cattle)
A tetrasaccharide linker sequence is required for GAG synthesis
  • AGRN
  • B3GALT6
  • B3GAT1
  • B3GAT3
  • B4GALT7
  • BCAN
  • BGN
  • CSPG2
  • CSPG4
  • CSPG5
  • DCN
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • NCAN
  • SDC1
  • SDC2
  • SDC4
  • VCAN
  • XYLT1
  • XYLT2
Bos taurus (cattle)
Interferon gamma signaling
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • ERK2
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKCD
  • PRKM1
  • PTPN6
  • SOCS1
  • SOCS3
  • STAT1
  • YB1
  • YBX1
Bos taurus (cattle)
RHO GTPases Activate NADPH Oxidases
  • CYBA
  • CYBB
  • ERK2
  • MAPK1
  • MAPK11
  • MAPK14
  • MAPK3
  • NCF1
  • NCF2
  • NCF4
  • NOX1
  • NOX3
  • NOXO1
  • PIK3C3
  • PIK3R4
  • PIN1
  • PRKCB
  • PRKCB1
  • PRKCD
  • PRKCZ
  • PRKM1
  • RAC2
  • S100A8
  • S100A9
Bos taurus (cattle)
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
  • AFGF
  • AREG
  • BTC
  • CD19
  • CD28
  • CD80
  • CD86
  • EGFR
  • EPGN
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • ERK2
  • ESR
  • ESR1
  • ESR2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF19
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF8A
  • FGF9
  • FGFA
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FLT3
  • FLT3LG
  • FRS2
  • FYN
  • Fgf4
  • GAB1
  • GAB2
  • GRB2
  • HBEGF
  • HBGF-1
  • HGF
  • ICOS
  • IER3
  • IL1RL1
  • IL33
  • INS
  • INSR
  • IRAK1
  • IRAK4
  • IRS1
  • IRS2
  • KIT
  • KITLG
  • KL
  • KLB
  • LCK
  • MAPK1
  • MAPK3
  • MET
  • MYD88
  • NR3A1
  • NR3A2
  • NRG1
  • NRG2
  • NRG3
  • PDGFA
  • PDGFB
  • PDGFRA
  • PDGFRB
  • PIK3AP1
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PIP4K2A
  • PIP4K2B
  • PIP4K2C
  • PIP5K1A
  • PIP5K1B
  • PIP5K1C
  • PIP5K2C
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5D
  • PPP2R5E
  • PRKM1
  • PTPN11
  • RAC2
  • RHOG
  • SCF
  • SRC
  • STRN
  • TGFA
  • TRAF6
  • TRAT1
  • VAV1
Bos taurus (cattle)
TWIK-related alkaline pH activated K+ channel (TALK)
  • KCNK16
  • KCNK17
Bos taurus (cattle)
Class B/2 (Secretin family receptors)
  • ADGRE3
  • ADGRE5
  • CD55
  • CRH
  • CRHBP
  • CRHR2
  • LOC112447333
  • LOC508459
  • PTH
  • PTH1R
  • PTH2
  • PTH2R
  • PTHLH
  • SPC
  • UCN2
  • UCN3
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024