GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **376 - 400** of **2074** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▼	Organism
rRNA processing in the mitochondrion	3-hydroxyacyl-CoA dehydrogenase type-2 Mitochondrial ribonuclease P catalytic subunit Zinc phosphodiesterase ELAC protein 2 tRNA methyltransferase 10 homolog C	O15091 Q7L0Y3 Q99714 Q9BQ52	ELAC2 ERAB HADH2 HPC2 HSD17B10 KIAA0391 MRPP1 MRPP2 MRPP3 PRORP RG9MTD1 SCHAD SDR5C1 TRMT10C XH98G2	Homo sapiens (human)
tRNA processing in the mitochondrion	3-hydroxyacyl-CoA dehydrogenase type-2 CCA tRNA nucleotidyltransferase 1, mitochondrial Mitochondrial ribonuclease P catalytic subunit Zinc phosphodiesterase ELAC protein 2 tRNA methyltransferase 10 homolog C	O15091 Q7L0Y3 Q96Q11 Q99714 Q9BQ52	ELAC2 ERAB HADH2 HPC2 HSD17B10 KIAA0391 MRPP1 MRPP2 MRPP3 PRORP RG9MTD1 SCHAD SDR5C1 TRMT10C TRNT1 XH98G2	Homo sapiens (human)
Inhibition of PKR	Interferon-induced, double-stranded RNA-activated protein kinase Non-structural protein 1	P03496 P19525	EIF2AK2 NS PKR PRKR	Homo sapiens (human)
SUMOylation of immune response proteins	E3 SUMO-protein ligase PIAS3 E3 SUMO-protein ligase PIAS4 E3 ubiquitin-protein ligase Topors Inhibitor of nuclear factor kappa-B kinase subunit epsilon Interferon-induced, double-stranded RNA-activated protein kinase NF-kappa-B essential modulator NF-kappa-B inhibitor alpha Nuclear factor NF-kappa-B p100 subunit SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1 Small ubiquitin-related modifier 3 Transcription factor p65	P19525 P25963 P55854 P63165 P63279 Q00653 Q04206 Q14164 Q8N2W9 Q9NS56 Q9Y6K9 Q9Y6X2	EIF2AK2 FIP3 IKBA IKBKE IKBKG IKKE IKKI KIAA0151 LUN LYT10 MAD3 NEMO NFKB2 NFKB3 NFKBI NFKBIA PIAS3 PIAS4 PIASG PKR PRKR RELA SMT3A SMT3C SMT3H1 SMT3H3 SUMO1 SUMO3 TOPORS TP53BPL UBC9 UBCE9 UBE2I UBL1	Homo sapiens (human)
Recycling of eIF2:GDP	Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Translation initiation factor eIF2B subunit alpha Translation initiation factor eIF2B subunit beta Translation initiation factor eIF2B subunit delta Translation initiation factor eIF2B subunit epsilon Translation initiation factor eIF2B subunit gamma	P05198 P20042 P41091 P49770 Q13144 Q14232 Q9NR50 Q9UI10	EIF2A EIF2B EIF2B1 EIF2B2 EIF2B3 EIF2B4 EIF2B5 EIF2BA EIF2BB EIF2BD EIF2BE EIF2G EIF2S1 EIF2S2 EIF2S3	Homo sapiens (human)
Differentiation of keratinocytes in interfollicular epidermis in mammalian skin	Pro-epidermal growth factor	P01133	EGF	Homo sapiens (human)
PLCG1 events in ERBB2 signaling	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 Epidermal growth factor receptor Pro-epidermal growth factor Receptor tyrosine-protein kinase erbB-2	P00533 P01133 P04626 P19174	EGF EGFR ERBB ERBB1 ERBB2 HER1 HER2 MLN19 NEU NGL PLC1 PLCG1	Homo sapiens (human)
HSF1 activation	14-3-3 protein epsilon Elongation factor 1-alpha 1 Heat shock factor protein 1 Heat shock factor-binding protein 1 Heat shock protein HSP 90-alpha Heat shock protein HSP 90-beta Histone deacetylase 6 Prostaglandin E synthase 3 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Transitional endoplasmic reticulum ATPase	O75506 P07900 P08238 P15927 P27694 P35244 P55072 P62258 P68104 Q00613 Q15185 Q9UBN7	EEF1A EEF1A1 EF1A HDAC6 HEL-220 HEL-S-70 HSBP1 HSF1 HSF1BP HSP90A HSP90AA1 HSP90AB1 HSP90B HSPC1 HSPC2 HSPC3 HSPCA HSPCB HSTF1 KIAA0901 LENG7 P23 PTGES3 REPA1 REPA2 REPA3 RPA1 RPA14 RPA2 RPA3 RPA32 RPA34 RPA70 TEBP VCP YWHAE	Homo sapiens (human)
Eukaryotic Translation Elongation	Elongation factor 1-alpha 1 Elongation factor 1-alpha 2 Elongation factor 1-beta Elongation factor 1-delta Elongation factor 1-gamma Putative elongation factor 1-alpha-like 3	P24534 P26641 P29692 P68104 Q05639 Q5VTE0	EEF1A EEF1A1 EEF1A1P5 EEF1A2 EEF1AL EEF1AL3 EEF1B EEF1B2 EEF1D EEF1G EF1A EF1B EF1D EF1G LENG7 STN	Homo sapiens (human)
Toll Like Receptor 9 (TLR9) Cascade	Early endosome antigen 1 Phosphatidylinositol 3-kinase catalytic subunit type 3 Phosphoinositide 3-kinase regulatory subunit 4 Rabenosyn-5 Toll-like receptor 9	Q15075 Q8NEB9 Q99570 Q9H1K0 Q9NR96	EEA1 PIK3C3 PIK3R4 RBSN TLR9 VPS15 VPS34 ZFYVE2 ZFYVE20	Homo sapiens (human)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial Interleukin-1 receptor-associated kinase 1 Interleukin-1 receptor-associated kinase 4 Interleukin-1 receptor-associated kinase-like 2 Mitogen-activated protein kinase kinase kinase 1 Myeloid differentiation primary response protein MyD88 TNF receptor-associated factor 6 Toll-like receptor 7 Toll-like receptor 9	O43187 P51617 Q13233 Q99836 Q9BQ95 Q9NR96 Q9NWZ3 Q9NYK1 Q9Y4K3	ECSIT IRAK IRAK1 IRAK2 IRAK4 MAP3K1 MAPKKK1 MEKK MEKK1 MYD88 RNF85 TLR7 TLR9 TRAF6	Homo sapiens (human)
MyD88 cascade initiated on plasma membrane	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial Flagellin Interleukin-1 receptor-associated kinase 1 Interleukin-1 receptor-associated kinase 4 Interleukin-1 receptor-associated kinase-like 2 Mitogen-activated protein kinase kinase kinase 1 Myeloid differentiation primary response protein MyD88 TNF receptor-associated factor 6 Toll-like receptor 10 Toll-like receptor 5	O43187 O60602 P04949 P51617 Q13233 Q99836 Q9BQ95 Q9BXR5 Q9NWZ3 Q9Y4K3	ECSIT IRAK IRAK1 IRAK2 IRAK4 MAP3K1 MAPKKK1 MEKK MEKK1 MYD88 RNF85 TIL3 TLR10 TLR5 TRAF6 flaF fliC hag	Homo sapiens (human)
Mitochondrial short-chain enoyl-CoA hydratase deficiency 1	Enoyl-CoA hydratase, mitochondrial	P30084	ECHS1	Homo sapiens (human)
NR1D1 (REV-ERBA) represses gene expression	Histone deacetylase 3 Nuclear receptor corepressor 1 Nuclear receptor subfamily 1 group D member 1	O15379 O75376 P20393	EAR1 HDAC3 HREV KIAA1047 NCOR1 NR1D1 THRAL	Homo sapiens (human)
Defective SLC1A3 causes episodic ataxia 6 (EA6)	Excitatory amino acid transporter 1	P43003	EAAT1 GLAST GLAST1 SLC1A3	Homo sapiens (human)
Defective SLC1A1 is implicated in schizophrenia 18 (SCZD18) and dicarboxylic aminoaciduria (DCBXA)	Excitatory amino acid transporter 3	P43005	EAAC1 EAAT3 HEAAC1 SLC1A1	Homo sapiens (human)
Maturation of protein E	Envelope small membrane protein Polyubiquitin-B Polyubiquitin-C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P0DTC4 P62979 P62987	E RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)
Maturation of protein E	Envelope small membrane protein Polyubiquitin-B Polyubiquitin-C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P59637 P62979 P62987	E RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 sM	Homo sapiens (human)
SARS-CoV-1 targets PDZ proteins in cell-cell junction	Envelope small membrane protein Protein PALS1	P59637 Q8N3R9	E MPP5 PALS1 sM	Homo sapiens (human)
Regulation of gap junction activity	Envelope small membrane protein Gap junction alpha-1 protein Tight junction protein ZO-1	P0DTC4 P17302 Q07157	E GJA1 GJAL TJP1 ZO1	Homo sapiens (human)
Activation of RAC1	Cytoplasmic protein NCK2 Ras-related C3 botulinum toxin substrate 1 Roundabout homolog 1 SH2/SH3 adapter protein NCK1 Serine/threonine-protein kinase PAK 1 Serine/threonine-protein kinase PAK 2 Serine/threonine-protein kinase PAK 3 Serine/threonine-protein kinase PAK 4 Serine/threonine-protein kinase PAK 5 Serine/threonine-protein kinase PAK 6 Slit homolog 2 protein Son of sevenless homolog 1 Son of sevenless homolog 2	O43639 O75914 O94813 O96013 P16333 P63000 Q07889 Q07890 Q13153 Q13177 Q9NQU5 Q9P286 Q9Y6N7	DUTT1 GRB4 KIAA1142 KIAA1264 NCK NCK1 NCK2 OPHN3 PAK1 PAK2 PAK3 PAK4 PAK5 PAK6 PAK7 RAC1 ROBO1 SLIL3 SLIT2 SOS1 SOS2 TC25	Homo sapiens (human)
Regulation of cortical dendrite branching	Cytoplasmic protein NCK2 Roundabout homolog 1 Roundabout homolog 2 Slit homolog 1 protein	O43639 O75093 Q9HCK4 Q9Y6N7	DUTT1 GRB4 KIAA0813 KIAA1568 MEGF4 NCK2 ROBO1 ROBO2 SLIL1 SLIT1	Homo sapiens (human)
Suppression of autophagy	Dual specificity protein phosphatase 16 N-acetyltransferase Eis Phosphatidylinositol-3-phosphatase Ras-related protein Rab-7a	O53361 P51149 P9WFK7 Q9BY84	DUSP16 KIAA1700 MKP7 RAB7 RAB7A eis sapM	Homo sapiens (human)
Defective Mismatch Repair Associated With MSH3	DNA mismatch repair protein Msh2 DNA mismatch repair protein Msh3	P20585 P43246	DUC1 DUG MSH2 MSH3	Homo sapiens (human)
Defective Mismatch Repair Associated With MSH2	DNA mismatch repair protein Msh2 DNA mismatch repair protein Msh3 DNA mismatch repair protein Msh6	P20585 P43246 P52701	DUC1 DUG GTBP MSH2 MSH3 MSH6	Homo sapiens (human)

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