GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **101 - 125** of **2074** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism
SUMOylation of nuclear envelope proteins	Ran GTPase-activating protein 1 SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1	P46060 P63165 P63279	KIAA1835 RANGAP1 SD SMT3C SMT3H3 SUMO1 UBC9 UBCE9 UBE2I UBL1	Homo sapiens (human)
SUMO is transferred from E1 to E2 (UBE2I, UBC9)	RWD domain-containing protein 3 SUMO-activating enzyme subunit 1 SUMO-activating enzyme subunit 2 SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1 Small ubiquitin-related modifier 2 Small ubiquitin-related modifier 3	P55854 P61956 P63165 P63279 Q9UBE0 Q9UBT2 Q9Y3V2	AOS1 RSUME RWDD3 SAE1 SAE2 SMT3A SMT3B SMT3C SMT3H1 SMT3H2 SMT3H3 SUA1 SUMO1 SUMO2 SUMO3 UBA2 UBC9 UBCE9 UBE2I UBL1 UBLE1A UBLE1B	Homo sapiens (human)
PDE3B signalling	RAC-beta serine/threonine-protein kinase cGMP-inhibited 3',5'-cyclic phosphodiesterase 3B	P31751 Q13370	AKT2 PDE3B	Homo sapiens (human)
Formation of tubulin folding intermediates by CCT/TriC	Putative tubulin-like protein alpha-4B T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit eta T-complex protein 1 subunit gamma T-complex protein 1 subunit theta T-complex protein 1 subunit zeta-2 T-complex protein 1 subunit zeta Tubulin alpha chain-like 3 Tubulin alpha-1A chain Tubulin alpha-1B chain Tubulin alpha-1C chain Tubulin alpha-3C chain Tubulin alpha-3D chain Tubulin alpha-3E chain Tubulin alpha-4A chain Tubulin alpha-8 chain Tubulin beta-1 chain Tubulin beta-2A chain Tubulin beta-2B chain Tubulin beta-3 chain Tubulin beta-4A chain Tubulin beta-4B chain Tubulin beta-6 chain	A6NHL2 P04350 P0DPH7 P0DPH8 P17987 P40227 P48643 P49368 P50990 P50991 P68363 P68366 P68371 P78371 Q13509 Q13885 Q6PEY2 Q71U36 Q92526 Q99832 Q9BQE3 Q9BUF5 Q9BVA1 Q9H4B7 Q9H853 Q9NY65	99D8.1 C21orf112 CCT1 CCT2 CCT3 CCT4 CCT5 CCT6 CCT6A CCT6B CCT7 CCT8 CCTA CCTB CCTD CCTE CCTG CCTH CCTQ CCTZ KIAA0002 KIAA0098 NIP7-1 SRB TCP1 TRIC5 TUBA1 TUBA1A TUBA1B TUBA1C TUBA2 TUBA3 TUBA3C TUBA3D TUBA3E TUBA4 TUBA4A TUBA4B TUBA6 TUBA8 TUBAL2 TUBAL3 TUBB1 TUBB2 TUBB2A TUBB2B TUBB2C TUBB3 TUBB4 TUBB4A TUBB4B TUBB5 TUBB6	Homo sapiens (human)
Defective pro-SFTPB causes SMDP1 and RDS	Pulmonary surfactant-associated protein B	P07988	SFTP3 SFTPB	Homo sapiens (human)
Defective SFTPA2 causes IPF	Pulmonary surfactant-associated protein A2	Q8IWL1	COLEC5 PSAP SFTP1 SFTPA SFTPA2 SFTPA2B	Homo sapiens (human)
Proton-coupled neutral amino acid transporters	Proton-coupled amino acid transporter 1 Proton-coupled amino acid transporter 2	Q495M3 Q7Z2H8	PAT1 PAT2 SLC36A1 SLC36A2 TRAMD1	Homo sapiens (human)
Inositol transporters	Proton myo-inositol cotransporter Sodium/myo-inositol cotransporter 2 Sodium/myo-inositol cotransporter	P53794 Q8WWX8 Q96QE2	KST1 SLC2A13 SLC5A11 SLC5A3 SLGTX SMIT2	Homo sapiens (human)
PTK6 Down-Regulation	Protein-tyrosine kinase 6 Tyrosine-protein kinase Srms Tyrosine-protein phosphatase non-receptor type 1	P18031 Q13882 Q9H3Y6	BRK C20orf148 PTK6 PTP1B PTPN1 SRMS	Homo sapiens (human)
PTK6 Activates STAT3	Protein-tyrosine kinase 6 Signal transducer and activator of transcription 3 Signal-transducing adaptor protein 2 Suppressor of cytokine signaling 3	O14543 P40763 Q13882 Q9UGK3	APRF BKS BRK CIS3 PTK6 SOCS3 SSI3 STAP2 STAT3	Homo sapiens (human)
UNC93B1 deficiency - HSE	Protein unc-93 homolog B1 Toll-like receptor 3	O15455 Q9H1C4	TLR3 UNC93 UNC93B UNC93B1	Homo sapiens (human)
SDK interactions	Protein sidekick-1 Protein sidekick-2	Q58EX2 Q7Z5N4	KIAA1514 SDK1 SDK2	Homo sapiens (human)
RHO GTPases Activate Rhotekin and Rhophilins	Protein lin-7 homolog B Rho-related GTP-binding protein RhoB Rho-related GTP-binding protein RhoC Rhophilin-1 Rhophilin-2 Rhotekin Ropporin-1A Tax1-binding protein 3 Transforming protein RhoA	O14907 P08134 P61586 P62745 Q8IUC4 Q8TCX5 Q9BST9 Q9HAP6 Q9HAT0	ARH12 ARH6 ARH9 ARHA ARHB ARHC KIAA1929 LIN7B MALS2 RHO12 RHOA RHOB RHOC RHPN1 RHPN2 ROPN1 ROPN1A RTKN RTKN1 TAX1BP3 TIP1 VELI2	Homo sapiens (human)
Response to elevated platelet cytosolic Ca2+	Protein kinase C alpha type Protein kinase C beta type Protein kinase C gamma type	P05129 P05771 P17252	PKCA PKCB PKCG PRKACA PRKCA PRKCB PRKCB1 PRKCG	Homo sapiens (human)
Disinhibition of SNARE formation	Protein kinase C alpha type Protein kinase C beta type Protein kinase C gamma type Syntaxin-4 Syntaxin-binding protein 3	O00186 P05129 P05771 P17252 Q12846	PKCA PKCB PKCG PRKACA PRKCA PRKCB PRKCB1 PRKCG STX4 STX4A STXBP3	Homo sapiens (human)
Post-transcriptional silencing by small RNAs	Protein argonaute-1 Protein argonaute-2 Protein argonaute-3 Protein argonaute-4 Trinucleotide repeat-containing gene 6A protein Trinucleotide repeat-containing gene 6B protein Trinucleotide repeat-containing gene 6C protein	Q8NDV7 Q9H9G7 Q9HCJ0 Q9HCK5 Q9UKV8 Q9UL18 Q9UPQ9	AGO1 AGO2 AGO3 AGO4 CAGH26 EIF2C1 EIF2C2 EIF2C3 EIF2C4 KIAA1093 KIAA1460 KIAA1567 KIAA1582 TNRC6 TNRC6A TNRC6B TNRC6C	Homo sapiens (human)
WNT ligand biogenesis and trafficking	Protein Wnt-10a Protein Wnt-10b Protein Wnt-11 Protein Wnt-16 Protein Wnt-2 Protein Wnt-2b Protein Wnt-3a Protein Wnt-4 Protein Wnt-5a Protein Wnt-5b Protein Wnt-6 Protein Wnt-7a Protein Wnt-7b Protein Wnt-8a Protein Wnt-8b Protein Wnt-9a Protein Wnt-9b Protein wntless homolog Protein-serine O-palmitoleoyltransferase porcupine Proto-oncogene Wnt-1 Proto-oncogene Wnt-3 Sorting nexin-3 Transmembrane emp24 domain-containing protein 5 Vacuolar protein sorting-associated protein 26A Vacuolar protein sorting-associated protein 29 Vacuolar protein sorting-associated protein 35	O00744 O00755 O14904 O14905 O60493 O75436 O96014 P04628 P09544 P41221 P56703 P56704 P56705 P56706 Q5T9L3 Q93097 Q93098 Q96QK1 Q9GZT5 Q9H1J5 Q9H1J7 Q9H237 Q9UBQ0 Q9UBV4 Q9Y3A6 Q9Y6F9	C1orf139 GPR177 INT1 INT1L1 INT4 IRP MEM3 MG61 PORC PORCN PPN SNX3 TMED5 VPS26 VPS26A VPS29 VPS35 WLS WNT1 WNT10A WNT10B WNT11 WNT12 WNT13 WNT14 WNT14B WNT15 WNT16 WNT2 WNT2B WNT3 WNT3A WNT4 WNT5A WNT5B WNT6 WNT7A WNT7B WNT8A WNT8B WNT8D WNT9A WNT9B	Homo sapiens (human)
TNFR1-mediated ceramide production	Protein FAN Small ribosomal subunit protein RACK1 Sphingomyelin phosphodiesterase 2 Sphingomyelin phosphodiesterase 3 Tumor necrosis factor receptor superfamily member 1A Tumor necrosis factor	O60906 P01375 P19438 P63244 Q92636 Q9NY59	FAN GNB2L1 NSMAF RACK1 SMPD2 SMPD3 TNF TNFA TNFAR TNFR1 TNFRSF1A TNFSF2	Homo sapiens (human)
Biosynthesis of EPA-derived SPMs	Prostaglandin G/H synthase 2	P35354	COX2 PTGS2	Homo sapiens (human)
Biosynthesis of DPAn-3 SPMs	Prostaglandin G/H synthase 2	P35354	COX2 PTGS2	Homo sapiens (human)
COX reactions	Prostaglandin G/H synthase 1	P23219	COX1 PTGS1	Homo sapiens (human)
Prostanoid ligand receptors	Prostacyclin receptor Prostaglandin D2 receptor 2 Prostaglandin D2 receptor Prostaglandin E2 receptor EP1 subtype Prostaglandin E2 receptor EP2 subtype Prostaglandin E2 receptor EP3 subtype Prostaglandin E2 receptor EP4 subtype Prostaglandin F2-alpha receptor Thromboxane A2 receptor	P21731 P34995 P35408 P43088 P43115 P43116 P43119 Q13258 Q9Y5Y4	CRTH2 DL1R GPR44 PRIPR PTGDR PTGDR2 PTGER1 PTGER2 PTGER3 PTGER4 PTGFR PTGIR TBXA2R	Homo sapiens (human)
Zinc efflux and compartmentalization by the SLC30 family	Probable proton-coupled zinc antiporter SLC30A3 Proton-coupled zinc antiporter SLC30A1 Proton-coupled zinc antiporter SLC30A2 Proton-coupled zinc antiporter SLC30A5 Proton-coupled zinc antiporter SLC30A8	Q8IWU4 Q8TAD4 Q99726 Q9BRI3 Q9Y6M5	SLC30A1 SLC30A2 SLC30A3 SLC30A5 SLC30A8 ZNT1 ZNT2 ZNT3 ZNT5 ZNT8 ZNTL1 ZTL1	Homo sapiens (human)
Replication of the SARS-CoV-2 genome	Probable ATP-dependent RNA helicase DDX5 Replicase polyprotein 1a Replicase polyprotein 1ab Retinoblastoma-associated protein Zinc finger CCHC-type and RNA-binding motif-containing protein 1 von Hippel-Lindau disease tumor suppressor	P06400 P0DTC1 P0DTD1 P17844 P40337 Q8TBF4	DDX5 G17P1 HELR HLR1 RB1 VHL ZCRB1 rep	Homo sapiens (human)
Replication of the SARS-CoV-1 genome	Probable ATP-dependent RNA helicase DDX5 Replicase polyprotein 1a Replicase polyprotein 1ab Retinoblastoma-associated protein Zinc finger CCHC-type and RNA-binding motif-containing protein 1 von Hippel-Lindau disease tumor suppressor	P06400 P0C6U8 P0C6X7 P17844 P40337 Q8TBF4	1a DDX5 G17P1 HELR HLR1 RB1 VHL ZCRB1 rep	Homo sapiens (human)

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