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G78059CC

Summary

GlyTouCan ID: G78059CC
IUPAC Condensed: Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs: N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level: Linkage defined saccharide
Monoisotopic Mass: 1786.65

External Links

GlyConnect structure

1860

GlyGen

G78059CC

GlycoChemExplorer

JCGG-M0000002988

JCGGDB AIST

JCGG-STR013729

KEGG GLYCAN

UniCarbKB

1603

ChEBI

156499
70967

PubChem Compound

70679232

PubChem Substance

252285486

3D Structures

GlycoNAVI: G78059CC
GLYCAM: DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH

Organisms

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Organisms	Evidence
Sus scrofa (pig)	GlyTouCan(glycome-db)
Rattus norvegicus (Norway rat)	GlyConnectStructure GlyGen(UniCarbKB)
Mus musculus (house mouse)	GlyConnectStructure GlyGen(UniCarbKB) GlyTouCan(glycome-db)
Chlorocebus aethiops (grivet)	GlyTouCan(glycome-db)
Gallus gallus (chicken)	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Hystricomorpha (guinea pigs and others) [inference]

Caviidae (cavies) [inference]

Cavia (guinea pigs) [inference]

Cavia porcellus (domestic guinea pig)

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus [inference]

Rattus norvegicus (Norway rat)

Cricetidae [inference]

Cricetinae (hamsters)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Cercopithecoidea [inference]

Cercopithecidae (Old World monkeys) [inference]

Cercopithecinae [inference]

Chlorocebus [inference]

Chlorocebus aethiops (grivet)

Laurasiatheria [inference]

Artiodactyla (whales, hippos, ruminants, pigs, camels etc.) [inference]

Suina [inference]

Suidae (pigs) [inference]

Sus [inference]

Sus scrofa (pig)

Sauropsida (sauropsids) [inference]

Sauria (diapsids) [inference]

Archelosauria [inference]

Archosauria [inference]

Dinosauria [inference]

Saurischia [inference]

Theropoda [inference]

Coelurosauria [inference]

Aves (birds) [inference]

Neognathae [inference]

Galloanserae [inference]

Galliformes (landfowls) [inference]

Phasianidae (turkeys) [inference]

Phasianinae [inference]

Gallus [inference]

Gallus gallus (chicken)

GlycoGene Database (GGDB)

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Product	Reference
B3GNT2	UDP-GlcNAc	G78059CC	G22865RK	15620693

Displaying **all 4** entries
Gene Symbol	Donor	Acceptor	Reference
MGAT3	UDP-GlcNAc	G78059CC	6222042
B3GNT8	UDP-GlcNAc	G78059CC	15620693
MGAT4A	UDP-GlcNAc	G78059CC	6222042
B3GNT7	UDP-GlcNAc	G78059CC	15620693

KEGG BRITE Database

KEGG ID

Enzyme

References

Reactions

Displaying **all 2** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05989	2.4.1.38	G80858MF	G78059CC
R05990	2.4.3.1	G78059CC	G56749GV

GALAXY

Glucose Units

ODS: 14.1
Amide: 7.4

Degrading Enzymes

Displaying entries **1 - 5** of 22 in total

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Enzyme	Substrate	Product
α-Glucuronidase	G01129NI	G78059CC
Desulfation	G03864MI	G78059CC
α-Sialidase	G07392QY	G78059CC
α-Glucuronidase	G09952GB	G78059CC
β-HexNAcase	G10691MJ	G78059CC

Glycans containing this structure in GALAXY

G52880ZN

G19444JC

G18956GV

G84410MY

G56749GV

G17819BX

G91905FJ

G50489VC

G11041DA

G89168LM

G82579AX

G92574YO

G14127XU

G63166WT

G86753CK

G25520XG

G32287FD

G23377WN

G00948WV

G98809PE

G40757ZO

G40586TV

G76478FT

G70708LW

G30925FN

G07947MJ

G17155VX

G07985DO

G91147LL

G53752TA

G80981KG

G84108IZ

G86696LV

G76842ZR

G33241WC

G45209NR

G09952GB

G45359RY

G53679FM

G30460NZ

G67689JF

G30651IU

G74107UT

G26949IX

G63889NK

G16529MG

G03864MI

G49124KW

G51093RA

G75308SV

G09576QH

G46601JS

G52747AL

G37597FW

G16706EL

G13179XV

G35769BE

G91413ZX

G93582HM

G30302VM

G28948UC

G63902MT

G97159KS

G72578SV

G91023GB

G77311BH

G86357DX

G17689DH

G84560PS

G81121WH

G05437QH

G07392QY

G25097RR

G45720CA

G10691MJ

G01129NI

G73492AT

G94531EZ

G55479DB

G31991IV

G15924SP

G66285SB

G82252QI

G80537QW

G51562OR

G78797VK

G07410AW

G95940OH

G37938RD

GALAXY: Glycoanalysis by the three axes of MS and chromatography.

Core Protein

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UniProt ID	Protein Name	Reference	Source
O75015	Low affinity immunoglobulin gamma Fc region receptor III-B	25345863	GlyGen GlyConnect
O97939	Enamelin	7767845	GlyConnect
P00451	Coagulation factor VIII	8969451	GlyGen GlyConnect
P00533	Epidermal growth factor receptor	10731668 10988252	GlyGen GlyConnect
P00742	Coagulation factor X	7620335	GlyGen GlyConnect
P00747	Plasminogen	1899031 2065054	GlyGen GlyConnect
P00750	Tissue-type plasminogen activator	2226797	GlyGen GlyConnect
P00797	Renin	1637829	GlyGen GlyConnect
P01009	Alpha-1-antitrypsin	6966283 8390218	GlyGen GlyConnect
P01215	Glycoprotein hormones alpha chain	15316280 1820200 1967025 1991473 6643471 8026573 9449027	GlyGen GlyConnect

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:a-dman-HEX-1:5
11b:b-dglc-HEX-1:5
12s:n-acetyl
13b:b-dgal-HEX-1:5
14b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:5o(6+1)10d
10:10o(2+1)11d
11:11d(2+1)12n
12:11o(4+1)13d
13:1o(6+1)14d

WURCS

WURCS=2.0/5,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-3-1-4-5/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_d2-e1_e4-f1_g2-h1_h4-i1

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

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