GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome November 12, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 2074 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
EGFR Transactivation by Gastrin
  • DTR
  • DTS
  • EGFR
  • ERBB
  • ERBB1
  • HBEGF
  • HEGFL
  • HER1
  • HRAS
  • HRAS1
  • MMP3
  • NRAS
  • PKCA
  • PRKACA
  • PRKCA
  • SOS1
  • STMY1
Homo sapiens (human)
Defective SLC26A2 causes chondrodysplasias
  • DTD
  • DTDST
  • SLC26A2
Homo sapiens (human)
Dopamine receptors
  • DRD1
  • DRD1B
  • DRD1L2
  • DRD2
  • DRD3
  • DRD4
  • DRD5
Homo sapiens (human)
Defective SLC26A3 causes congenital secretory chloride diarrhea 1 (DIAR1)
  • DRA
  • SLC26A3
Homo sapiens (human)
Multifunctional anion exchangers
  • DRA
  • DTD
  • DTDST
  • PDS
  • SAT1
  • SLC26A1
  • SLC26A11
  • SLC26A2
  • SLC26A3
  • SLC26A4
  • SLC26A6
  • SLC26A7
  • SLC26A9
  • SLC5A12
  • SMCT2
  • SUT2
Homo sapiens (human)
Synthesis of dolichyl-phosphate mannose
  • DPM1
  • DPM2
  • DPM3
Homo sapiens (human)
Defective DPM1 causes CDG-1e
  • DPM1
  • DPM2
  • DPM3
Homo sapiens (human)
Defective DPM3 causes CDG-1o
  • DPM1
  • DPM2
  • DPM3
Homo sapiens (human)
Defective DPM2 causes CDG-1u
  • DPM1
  • DPM2
  • DPM3
Homo sapiens (human)
SMAD4 MH2 Domain Mutants in Cancer
  • DPC4
  • MADH2
  • MADH3
  • MADH4
  • MADR2
  • SMAD2
  • SMAD3
  • SMAD4
Homo sapiens (human)
SMAD2/3 MH2 Domain Mutants in Cancer
  • DPC4
  • MADH2
  • MADH3
  • MADH4
  • MADR2
  • SMAD2
  • SMAD3
  • SMAD4
Homo sapiens (human)
Defective DPAGT1 causes CDG-1j, CMSTA2
  • DPAGT1
  • DPAGT2
Homo sapiens (human)
Inhibition of replication initiation of damaged DNA by RB1/E2F1
  • DP1
  • DP2
  • E2F1
  • POLA
  • POLA1
  • POLA2
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R3B
  • PPP2R3L
  • PRIM1
  • PRIM2
  • PRIM2A
  • RB1
  • RBBP3
  • TFDP1
  • TFDP2
Homo sapiens (human)
Activation of NOXA and translocation to mitochondria
  • DP1
  • DP2
  • E2F1
  • NOXA
  • P53
  • PMAIP1
  • RBBP3
  • TFDP1
  • TFDP2
  • TP53
Homo sapiens (human)
Nef and signal transduction
  • DOCK2
  • ELMO1
  • FYN
  • HCK
  • KIAA0209
  • KIAA0281
  • LCK
  • PAK2
  • RAC1
  • TC25
  • nef
Homo sapiens (human)
Vitamin B1 (thiamin) metabolism
  • DNC
  • MUP1
  • SLC19A2
  • SLC19A3
  • SLC25A19
  • THT1
  • THTPA
  • TPK1
  • TRMA
Homo sapiens (human)
Removal of the Flap Intermediate
  • DNA2
  • DNA2L
  • FEN1
  • KIAA0039
  • KIAA0083
  • PCNA
  • POLA
  • POLA1
  • POLA2
  • POLD
  • POLD1
  • POLD2
  • POLD3
  • POLD4
  • POLDS
  • PRIM1
  • PRIM2
  • PRIM2A
  • RAD2
  • REPA1
  • REPA2
  • REPA3
  • RPA1
  • RPA14
  • RPA2
  • RPA3
  • RPA32
  • RPA34
  • RPA70
Homo sapiens (human)
Succinyl-CoA Biosynthesis
  • DLD
  • DLST
  • DLTS
  • GCSL
  • KGD4
  • LAD
  • MRPS36
  • OGDH
  • PHE3
Homo sapiens (human)
PDH complex synthesizes acetyl-CoA from PYR
  • DLAT
  • DLD
  • DLTA
  • GCSL
  • LAD
  • PDHA1
  • PDHA2
  • PDHAL
  • PDHB
  • PDHX
  • PDX1
  • PHE1A
  • PHE1B
  • PHE3
Homo sapiens (human)
Regulation of pyruvate dehydrogenase (PDH) complex
  • DLAT
  • DLD
  • DLTA
  • GCSL
  • GSTZ1
  • KIAA1348
  • KIAA1990
  • LAD
  • MAAI
  • PDHA1
  • PDHA2
  • PDHAL
  • PDHB
  • PDHK1
  • PDHK2
  • PDHK3
  • PDHK4
  • PDHX
  • PDK1
  • PDK2
  • PDK3
  • PDK4
  • PDP
  • PDP1
  • PDP2
  • PDPR
  • PDX1
  • PHE1A
  • PHE1B
  • PHE3
  • PPM2C
  • SIR2L4
  • SIRT4
Homo sapiens (human)
Signaling by LRP5 mutants
  • DKK1
  • DKK2
  • DKK4
  • KREMEN
  • KREMEN1
  • KREMEN2
  • KRM1
  • KRM2
  • LR3
  • LRP5
  • LRP7
Homo sapiens (human)
Negative regulation of TCF-dependent signaling by WNT ligand antagonists
  • DKK1
  • DKK2
  • DKK4
  • FRP
  • FRP1
  • FRP2
  • KREMEN
  • KREMEN1
  • KREMEN2
  • KRM1
  • KRM2
  • LR3
  • LRP5
  • LRP6
  • LRP7
  • SARP1
  • SARP2
  • SFRP1
  • SFRP2
  • SOST
  • WIF1
  • WNT14
  • WNT3A
  • WNT4
  • WNT5A
  • WNT9A
Homo sapiens (human)
Translesion synthesis by POLK
  • DINB1
  • MAD2B
  • MAD2L2
  • PCNA
  • POLK
  • POLZ
  • REPA1
  • REPA2
  • REPA3
  • REV1
  • REV1L
  • REV3
  • REV3L
  • REV7
  • RFC1
  • RFC140
  • RFC2
  • RFC3
  • RFC4
  • RFC5
  • RPA1
  • RPA14
  • RPA2
  • RPA3
  • RPA32
  • RPA34
  • RPA70
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Homo sapiens (human)
Sulfide oxidation to sulfate
  • DIC
  • ETHE1
  • HSCO
  • KAT
  • SLC25A10
  • SQOR
  • SQRDL
  • SUOX
  • TST
  • TSTD1
Homo sapiens (human)
OADH complex synthesizes glutaryl-CoA from 2-OA
  • DHTKD1
  • DLD
  • DLST
  • DLTS
  • GCSL
  • KIAA1630
  • LAD
  • PHE3
Homo sapiens (human)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: December 9, 2024