GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **1601 - 1625** of **2074** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▲	Organism
MET interacts with TNS proteins	Hepatocyte growth factor receptor Hepatocyte growth factor Integrin beta-1 Tensin-3 Tensin-4	P05556 P08581 P14210 Q68CZ2 Q8IZW8	CTEN FNRB HGF HPTA ITGB1 MDF2 MET MSK12 TEM6 TENS1 TNS3 TNS4 TPP	Homo sapiens (human)
Loss of MECP2 binding ability to the NCoR/SMRT complex	F-box-like/WD repeat-containing protein TBL1X F-box-like/WD repeat-containing protein TBL1XR1 G protein pathway suppressor 2 Histone deacetylase 3 Nuclear receptor corepressor 1 Nuclear receptor corepressor 2	O15379 O60907 O75376 Q13227 Q9BZK7 Q9Y618	CTG26 GPS2 HDAC3 IRA1 KIAA1047 NCOR1 NCOR2 TBL1 TBL1X TBL1XR1 TBLR1	Homo sapiens (human)
Formation of axial mesoderm	Catenin beta-1 Forkhead box protein H1 Hepatocyte nuclear factor 3-alpha Hepatocyte nuclear factor 3-beta Homeobox protein notochord Lymphoid enhancer-binding factor 1 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Sonic hedgehog protein T-box transcription factor T Transcription factor 7 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-4	A8MTQ0 O15178 O75593 P35222 P36402 P46937 P55317 P84022 Q15465 Q15561 Q15562 Q15796 Q9UJU2 Q9Y261	CTNNB CTNNB1 FAST1 FAST2 FOXA1 FOXA2 FOXH1 HNF3A HNF3B LEF1 MADH2 MADH3 MADR2 NOTO RTEF1 SHH SMAD2 SMAD3 T TBXT TCF1 TCF13L1 TCF3A TCF3B TCF7 TEAD2 TEAD4 TEF3 TEF4 YAP1 YAP65	Homo sapiens (human)
Transport of inorganic cations/anions and amino acids/oligopeptides	Cystinosin Excitatory amino acid transporter 1 Excitatory amino acid transporter 2 Excitatory amino acid transporter 3 Excitatory amino acid transporter 4 Excitatory amino acid transporter 5 Mitochondrial S-adenosylmethionine carrier protein Vesicular inhibitory amino acid transporter	O00341 O60931 P43003 P43004 P43005 P48664 Q70HW3 Q9H598	CTNS EAAC1 EAAT1 EAAT2 EAAT3 EAAT4 EAAT5 GLAST GLAST1 GLT1 HEAAC1 SAMC SLC1A1 SLC1A2 SLC1A3 SLC1A6 SLC1A7 SLC25A26 SLC32A1 VGAT VIAAT	Homo sapiens (human)
Defective NEU1 causes sialidosis	Beta-galactosidase Lysosomal protective protein Sialidase-1	P10619 P16278 Q99519	CTSA ELNR1 GLB1 NANH NEU1 PPGB	Homo sapiens (human)
Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling	Cullin-1 E3 ubiquitin-protein ligase RBX1 Neurogenic locus notch homolog protein 1 S-phase kinase-associated protein 1	P46531 P62877 P63208 Q13616	CUL1 EMC19 NOTCH1 OCP2 RBX1 RNF75 ROC1 SKP1 SKP1A TAN1 TCEB1L	Homo sapiens (human)
Gap junction assembly	Gap junction alpha-1 protein Gap junction alpha-10 protein Gap junction alpha-3 protein Gap junction alpha-4 protein Gap junction alpha-5 protein Gap junction alpha-8 protein Gap junction alpha-9 protein Gap junction beta-1 protein Gap junction beta-2 protein Gap junction beta-3 protein Gap junction beta-4 protein Gap junction beta-5 protein Gap junction beta-6 protein Gap junction beta-7 protein Gap junction delta-2 protein Gap junction delta-3 protein Gap junction delta-4 protein Gap junction gamma-1 protein Gap junction gamma-2 protein	O75712 O95377 O95452 P08034 P17302 P29033 P35212 P36382 P36383 P48165 P57773 Q5T442 Q6PEY0 Q8N144 Q969M2 Q96KN9 Q9NTQ9 Q9UKL4 Q9Y6H8	CX25 CX31 CX32 CX40.1 CX62 GJA1 GJA10 GJA11 GJA12 GJA3 GJA4 GJA5 GJA7 GJA8 GJA9 GJAL GJB1 GJB2 GJB3 GJB4 GJB5 GJB6 GJB7 GJC1 GJC2 GJD2 GJD3 GJD4	Homo sapiens (human)
Electric Transmission Across Gap Junctions	Gap junction alpha-10 protein Gap junction delta-2 protein Gap junction gamma-1 protein Pannexin-1 Pannexin-2	P36383 Q969M2 Q96RD6 Q96RD7 Q9UKL4	CX62 GJA10 GJA7 GJA9 GJC1 GJD2 MRS1 PANX1 PANX2	Homo sapiens (human)
Signaling by ROBO receptors	C-X-C chemokine receptor type 4 Ena/VASP-like protein Glypican-1 Leucine-rich repeat transmembrane protein FLRT3 Neuropilin-1 Profilin-1 Profilin-2 Protein enabled homolog Roundabout homolog 1 Roundabout homolog 2 Slit homolog 1 protein Slit homolog 2 protein Slit homolog 3 protein Stromal cell-derived factor 1 Vasodilator-stimulated phosphoprotein	O14786 O75093 O75094 O94813 P07737 P35052 P35080 P48061 P50552 P61073 Q8N8S7 Q9HCK4 Q9NZU0 Q9UI08 Q9Y6N7	CXCL12 CXCR4 DUTT1 ENAH EVL FLRT3 GPC1 KIAA0813 KIAA0814 KIAA1469 KIAA1568 MEGF4 MEGF5 MENA NRP NRP1 PFN1 PFN2 RNB6 ROBO1 ROBO2 SDF1 SDF1A SDF1B SLIL1 SLIL2 SLIL3 SLIT1 SLIT2 SLIT3 VASP VEGF165R	Homo sapiens (human)
Oxidative demethylation of DNA	G/T mismatch-specific thymine DNA glycosylase Methylcytosine dioxygenase TET1 Methylcytosine dioxygenase TET2 Methylcytosine dioxygenase TET3	O43151 Q13569 Q6N021 Q8NFU7	CXXC6 KIAA0401 KIAA1546 KIAA1676 LCX TDG TET1 TET2 TET3	Homo sapiens (human)
Receptor-type tyrosine-protein phosphatases	Interleukin-1 receptor accessory protein-like 1 Leucine-rich repeat-containing protein 4B Liprin-alpha-1 Liprin-alpha-2 Liprin-alpha-3 Liprin-alpha-4 Liprin-beta-1 Liprin-beta-2 NT-3 growth factor receptor Receptor-type tyrosine-protein phosphatase F Receptor-type tyrosine-protein phosphatase S Receptor-type tyrosine-protein phosphatase delta SLIT and NTRK-like protein 1 SLIT and NTRK-like protein 2 SLIT and NTRK-like protein 3 SLIT and NTRK-like protein 4 SLIT and NTRK-like protein 5 SLIT and NTRK-like protein 6 X-linked interleukin-1 receptor accessory protein-like 2	O75145 O75334 O75335 O94933 O94991 P10586 P23468 Q13136 Q13332 Q16288 Q86W92 Q8IW52 Q8ND30 Q96PX8 Q9H156 Q9H5Y7 Q9NP60 Q9NT99 Q9NZN1	CXorf2 IL1R9 IL1RAPL1 IL1RAPL2 KIAA0654 KIAA0848 KIAA0897 KIAA0918 KIAA1230 KIAA1854 KIAA1910 LAR LIP1 LRIG4 LRRC11 LRRC12 LRRC4B NTRK3 OPHN4 PPFIA1 PPFIA2 PPFIA3 PPFIA4 PPFIBP1 PPFIBP2 PTPRD PTPRF PTPRS SLITL1 SLITRK1 SLITRK2 SLITRK3 SLITRK4 SLITRK5 SLITRK6 TRKC	Homo sapiens (human)
Vitamin C (ascorbate) metabolism	Cytochrome b5 Glutathione S-transferase omega-1 Glutathione S-transferase omega-2 NADH-cytochrome b5 reductase 3 Solute carrier family 2, facilitated glucose transporter member 1 Solute carrier family 2, facilitated glucose transporter member 3 Solute carrier family 23 member 1 Solute carrier family 23 member 2	P00167 P00387 P11166 P11169 P78417 Q9H4Y5 Q9UGH3 Q9UHI7	CYB5 CYB5A CYB5R3 DIA1 GLUT1 GLUT3 GSTO1 GSTO2 GSTTLP28 KIAA0238 NBTL1 SLC23A1 SLC23A2 SLC2A1 SLC2A3 SVCT1 SVCT2 YSPL2 YSPL3	Homo sapiens (human)
WNT5:FZD7-mediated leishmania damping	Cytochrome b-245 light chain Frizzled-7 Mitogen-activated protein kinase 8 NADPH oxidase 1 NADPH oxidase activator 1 NADPH oxidase organizer 1 Protein Wnt-5a Ras-related C3 botulinum toxin substrate 1 Segment polarity protein dishevelled homolog DVL-1 Segment polarity protein dishevelled homolog DVL-2 Segment polarity protein dishevelled homolog DVL-3 Transcription factor Jun	O14640 O14641 O75084 P05412 P13498 P41221 P45983 P63000 Q86UR1 Q8NFA2 Q92997 Q9Y5S8	CYBA DVL1 DVL2 DVL3 FZD7 JNK1 JUN KIAA0208 MAPK8 MOX1 NOH1 NOX1 NOXA1 NOXO1 P41NOX P51NOX PRKM8 RAC1 SAPK1 SAPK1C SH3PXD5 TC25 WNT5A	Homo sapiens (human)
Eicosanoids	7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase Cytochrome P450 4A11 Cytochrome P450 4A22 Cytochrome P450 4B1 Cytochrome P450 4F11 Cytochrome P450 4F12 Cytochrome P450 4F2 Cytochrome P450 4F3 Cytochrome P450 4F8 Prostacyclin synthase Thromboxane-A synthase Ultra-long-chain fatty acid omega-hydroxylase	P13584 P24557 P78329 P98187 Q02928 Q08477 Q16647 Q5TCH4 Q6NT55 Q9HBI6 Q9HCS2 Q9UNU6	CYP12 CYP4A11 CYP4A2 CYP4A22 CYP4B1 CYP4F11 CYP4F12 CYP4F2 CYP4F22 CYP4F3 CYP4F8 CYP5 CYP5A1 CYP8 CYP8A1 CYP8B1 LTB4H PTGIS TBXAS1 TXAS	Homo sapiens (human)
Synthesis of epoxy (EET) and dihydroxyeicosatrienoic acids (DHET)	Bifunctional epoxide hydrolase 2 Cytochrome P450 1A1 Cytochrome P450 1A2 Cytochrome P450 1B1 Cytochrome P450 2C19 Cytochrome P450 2C8 Cytochrome P450 2C9 Cytochrome P450 2J2	P04798 P05177 P10632 P11712 P33261 P34913 P51589 Q16678	CYP1A1 CYP1A2 CYP1B1 CYP2C10 CYP2C19 CYP2C8 CYP2C9 CYP2J2 EPHX2	Homo sapiens (human)
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)	Cytochrome P450 1A1 Cytochrome P450 1A2 Cytochrome P450 1B1 Cytochrome P450 2C19 Cytochrome P450 2C8 Cytochrome P450 2C9 Cytochrome P450 2U1 Cytochrome P450 4A11 Cytochrome P450 4F2	P04798 P05177 P10632 P11712 P33261 P78329 Q02928 Q16678 Q7Z449	CYP1A1 CYP1A2 CYP1B1 CYP2C10 CYP2C19 CYP2C8 CYP2C9 CYP2U1 CYP4A11 CYP4A2 CYP4F2	Homo sapiens (human)
Biosynthesis of maresin-like SPMs	Cytochrome P450 1A2 Cytochrome P450 2C8 Cytochrome P450 2C9 Cytochrome P450 2D6 Cytochrome P450 2E1 Cytochrome P450 3A4	P05177 P05181 P08684 P10632 P10635 P11712	CYP1A2 CYP2C10 CYP2C8 CYP2C9 CYP2D6 CYP2DL1 CYP2E CYP2E1 CYP3A3 CYP3A4	Homo sapiens (human)
Aromatic amines can be N-hydroxylated or N-dealkylated by CYP1A2	Cytochrome P450 1A2	P05177	CYP1A2	Homo sapiens (human)
Fatty acids	Cytochrome P450 2A13 Cytochrome P450 2A7 Cytochrome P450 2B6 Cytochrome P450 2D6 Cytochrome P450 2F1 Cytochrome P450 2J2 Cytochrome P450 4A11 Cytochrome P450 4A22 Cytochrome P450 4B1 Cytochrome P450 4F11 Cytochrome P450 4F12 Cytochrome P450 4F2 Cytochrome P450 4F3 Cytochrome P450 4F8 Ultra-long-chain fatty acid omega-hydroxylase	P10635 P13584 P20813 P20853 P24903 P51589 P78329 P98187 Q02928 Q08477 Q16696 Q5TCH4 Q6NT55 Q9HBI6 Q9HCS2	CYP2A13 CYP2A7 CYP2B6 CYP2D6 CYP2DL1 CYP2F1 CYP2J2 CYP4A11 CYP4A2 CYP4A22 CYP4B1 CYP4F11 CYP4F12 CYP4F2 CYP4F22 CYP4F3 CYP4F8 LTB4H	Homo sapiens (human)
Miscellaneous substrates	Cytochrome P450 2D6 Cytochrome P450 2S1 Cytochrome P450 2U1 Cytochrome P450 2W1 Cytochrome P450 3A43 Cytochrome P450 4A11 Cytochrome P450 4A22 Cytochrome P450 4B1 Cytochrome P450 4F11 Cytochrome P450 4F2 Cytochrome P450 4F3 Ultra-long-chain fatty acid omega-hydroxylase	P10635 P13584 P78329 Q02928 Q08477 Q5TCH4 Q6NT55 Q7Z449 Q8TAV3 Q96SQ9 Q9HB55 Q9HBI6	CYP2D6 CYP2DL1 CYP2S1 CYP2U1 CYP2W1 CYP3A43 CYP4A11 CYP4A2 CYP4A22 CYP4B1 CYP4F11 CYP4F2 CYP4F22 CYP4F3 LTB4H	Homo sapiens (human)
Early Phase of HIV Life Cycle	DNA ligase 1 Flap endonuclease 1 Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Protein Rev Protein Vpr Protein Vpu Virion infectivity factor	P04585 P04591 P04618 P05919 P18858 P39748 P62937 P69723 P69726	CYPA FEN1 LIG1 PPIA RAD2 gag gag-pol rev vif vpr vpu	Homo sapiens (human)
Assembly Of The HIV Virion	Envelope glycoprotein gp160 Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Polyubiquitin-B Polyubiquitin-C Protein Nef Protein Rev Protein Vpr Protein Vpu Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Virion infectivity factor	P04578 P04585 P04591 P04601 P04618 P05919 P0CG47 P0CG48 P62937 P62979 P62987 P69723 P69726	CYPA PPIA RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 env gag gag-pol nef rev vif vpr vpu	Homo sapiens (human)
Uncoating of the HIV Virion	Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Protein Nef Protein Rev Protein Vpr Protein Vpu Virion infectivity factor	P04585 P04591 P04601 P04618 P05919 P62937 P69723 P69726	CYPA PPIA gag gag-pol nef rev vif vpr vpu	Homo sapiens (human)
Minus-strand DNA synthesis	Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Protein Rev Protein Vpr Protein Vpu Virion infectivity factor	P04585 P04591 P04618 P05919 P62937 P69723 P69726	CYPA PPIA gag gag-pol rev vif vpr vpu	Homo sapiens (human)
Plus-strand DNA synthesis	Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Protein Rev Protein Vpr Protein Vpu Virion infectivity factor	P04585 P04591 P04618 P05919 P62937 P69723 P69726	CYPA PPIA gag gag-pol rev vif vpr vpu	Homo sapiens (human)

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