GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **151 - 175** of **2074** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism
VEGF binds to VEGFR leading to receptor dimerization	Placenta growth factor Vascular endothelial growth factor A, long form Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D Vascular endothelial growth factor receptor 1 Vascular endothelial growth factor receptor 2 Vascular endothelial growth factor receptor 3	O43915 P15692 P17948 P35916 P35968 P49763 P49765 P49767	FIGF FLK1 FLT FLT1 FLT4 FRT KDR PGF PGFL PLGF VEGF VEGFA VEGFB VEGFC VEGFD VEGFR1 VEGFR2 VEGFR3 VRF	Homo sapiens (human)
Defective PMM2 causes CDG-1a	Phosphomannomutase 2	O15305	PMM2	Homo sapiens (human)
Defective ABCA3 causes SMDP3	Phospholipid-transporting ATPase ABCA3	Q99758	ABC3 ABCA3	Homo sapiens (human)
Defective ABCA3 causes SMDP3	Phospholipid-transporting ATPase ABCA3	Q99758	ABC3 ABCA3	Homo sapiens (human)
Defective PGM1 causes CDG1t	Phosphoglucomutase-1	P36871	PGM1	Homo sapiens (human)
Synthesis of PS	Phosphatidylserine synthase 1 Phosphatidylserine synthase 2	P48651 Q9BVG9	KIAA0024 PSS2 PSSA PTDSS1 PTDSS2	Homo sapiens (human)
Synthesis of PIPs in the nucleus	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha Phosphatidylinositol 5-phosphate 4-kinase type-2 beta Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	P48426 P78356 Q86T03 Q8TBX8	C14orf9 PI5P4KA PIP4K2A PIP4K2B PIP4K2C PIP4P1 PIP5K2 PIP5K2A PIP5K2B PIP5K2C TMEM55B	Homo sapiens (human)
PI3K events in ERBB4 signaling	Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Pro-neuregulin-1, membrane-bound isoform Pro-neuregulin-2, membrane-bound isoform Pro-neuregulin-3, membrane-bound isoform Pro-neuregulin-4, membrane-bound isoform Probetacellulin Proepiregulin Proheparin-binding EGF-like growth factor	O14511 O14944 P27986 P35070 P42336 P56975 Q02297 Q8WWG1 Q99075	BTC DTR DTS EREG GGF GRB1 HBEGF HEGFL HGL HRGA NDF NRG1 NRG2 NRG3 NRG4 NTAK PIK3CA PIK3R1 SMDF	Homo sapiens (human)
PTEN Loss of Function in Cancer	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN	P60484	MMAC1 PTEN TEP1	Homo sapiens (human)
Defective ABCB4 causes PFIC3, ICP3 and GBD1	Phosphatidylcholine translocator ABCB4	P21439	ABCB4 MDR3 PGY3	Homo sapiens (human)
TGFBR1 LBD Mutants in Cancer	Peptidyl-prolyl cis-trans isomerase FKBP1A TGF-beta receptor type-1 TGF-beta receptor type-2 Transforming growth factor beta-1 proprotein	P01137 P36897 P37173 P62942	ALK5 FKBP1 FKBP12 FKBP1A SKR4 TGFB TGFB1 TGFBR1 TGFBR2	Homo sapiens (human)
Glucuronidation	Palmitoyl-protein thioesterase ABHD10, mitochondrial UDP-glucuronosyltransferase 1-6 UDP-glucuronosyltransferase 1A10 UDP-glucuronosyltransferase 1A1 UDP-glucuronosyltransferase 1A3 UDP-glucuronosyltransferase 1A4 UDP-glucuronosyltransferase 1A5 UDP-glucuronosyltransferase 1A7 UDP-glucuronosyltransferase 1A8 UDP-glucuronosyltransferase 1A9 UDP-glucuronosyltransferase 2A1 UDP-glucuronosyltransferase 2A2 UDP-glucuronosyltransferase 2A3 UDP-glucuronosyltransferase 2B10 UDP-glucuronosyltransferase 2B11 UDP-glucuronosyltransferase 2B15 UDP-glucuronosyltransferase 2B17 UDP-glucuronosyltransferase 2B28 UDP-glucuronosyltransferase 2B4 UDP-glucuronosyltransferase 2B7 UDP-glucuronosyltransferase 3A1 UDP-glucuronosyltransferase 3A2	O60656 O75310 O75795 P06133 P0DTE4 P0DTE5 P16662 P19224 P22309 P22310 P35503 P35504 P36537 P54855 Q3SY77 Q6NUS8 Q6UWM9 Q9BY64 Q9HAW7 Q9HAW8 Q9HAW9 Q9NUJ1	ABHD10 GNT1 UGT1 UGT1A1 UGT1A10 UGT1A3 UGT1A4 UGT1A5 UGT1A6 UGT1A7 UGT1A8 UGT1A9 UGT2A1 UGT2A2 UGT2A3 UGT2B10 UGT2B11 UGT2B15 UGT2B17 UGT2B28 UGT2B4 UGT2B7 UGT2B8 UGT3A1 UGT3A2 UGTB2B9	Homo sapiens (human)
Platelet homeostasis	P2X purinoceptor 1 P2X purinoceptor 2 P2X purinoceptor 3 P2X purinoceptor 4 P2X purinoceptor 5 P2X purinoceptor 6 P2X purinoceptor 7 Platelet-activating factor acetylhydrolase 2, cytoplasmic	O15547 P51575 P56373 Q93086 Q99487 Q99571 Q99572 Q9UBL9	P2RX1 P2RX2 P2RX3 P2RX4 P2RX5 P2RX6 P2RX7 P2RXL1 P2X1 P2X2 P2X5 P2X5FL P2X6 PAFAH2	Homo sapiens (human)
Vasopressin-like receptors	Oxytocin receptor Oxytocin-neurophysin 1 Vasopressin V1a receptor Vasopressin V1b receptor Vasopressin V2 receptor Vasopressin-neurophysin 2-copeptin	P01178 P01185 P30518 P30559 P37288 P47901	ADHR ARVP AVP AVPR1 AVPR1A AVPR1B AVPR2 AVPR3 DIR DIR3 OT OXT OXTR V2R VP VPR3	Homo sapiens (human)
LXRs regulate gene expression linked to triglyceride lipolysis in adipose	Oxysterols receptor LXR-alpha Oxysterols receptor LXR-beta Perilipin-1 Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta	O60240 P19793 P28702 P55055 Q13133	LXRA LXRB NER NR1H2 NR1H3 NR2B1 NR2B2 PERI PLIN PLIN1 RXRA RXRB UNR	Homo sapiens (human)
Eicosanoid ligand-binding receptors	Oxoeicosanoid receptor 1	Q8TDS5	GPR170 OXER1 TG1019	Homo sapiens (human)
Metabolism of polyamines	Ornithine decarboxylase S-adenosylmethionine decarboxylase proenzyme Spermidine synthase Spermine synthase	P11926 P17707 P19623 P52788	AMD AMD1 ODC1 SMS SPS1 SRM SRML1	Homo sapiens (human)
Defective SLC22A5 causes systemic primary carnitine deficiency (CDSP)	Organic cation/carnitine transporter 2	O76082	OCTN2 SLC22A5	Homo sapiens (human)
Organic cation transport	Organic cation/carnitine transporter 2 Regulatory solute carrier protein family 1 member 1 Runt-related transcription factor 1 Solute carrier family 22 member 15 Solute carrier family 22 member 16 Solute carrier family 22 member 18 Solute carrier family 22 member 1 Solute carrier family 22 member 2 Solute carrier family 22 member 3 Solute carrier family 22 member 4	O15244 O15245 O75751 O76082 Q01196 Q86VW1 Q8IZD6 Q92681 Q96BI1 Q9H015	AML1 BWR1A BWSCR1A CBFA2 EMTH ETT FLIPT1 HET IMPT1 ITM OCT1 OCT2 OCT3 OCT6 OCTN1 OCTN2 ORCTL2 RSC1A1 RUNX1 SLC22A1 SLC22A15 SLC22A16 SLC22A18 SLC22A1L SLC22A2 SLC22A3 SLC22A4 SLC22A5 TSSC5 UT2H	Homo sapiens (human)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 11 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	Q4U2R8 Q8TCC7 Q96S37 Q9NSA0 Q9Y694	NLT OAT1 OAT2 OAT3 OAT4 OATL4 PAHT SLC22A11 SLC22A12 SLC22A6 SLC22A7 SLC22A8 URAT1	Homo sapiens (human)
Translation of Accessory Proteins	ORF6 protein ORF7a protein ORF8 protein ORF9b protein	P0DTC6 P0DTC7 P0DTC8 P0DTD2	6 7a 8 9b	Homo sapiens (human)
Formation of the active cofactor, UDP-glucuronate	Nucleotide sugar transporter SLC35D1 Nucleotide sugar transporter SLC35D2 UDP-glucose 6-dehydrogenase UDP-glucuronic acid decarboxylase 1 UTP--glucose-1-phosphate uridylyltransferase	O60701 Q16851 Q76EJ3 Q8NBZ7 Q9NTN3	HFRC KIAA0260 SLC35D1 SLC35D2 UGDH UGP1 UGP2 UGTREL7 UGTREL8 UXS1	Homo sapiens (human)
LXRs regulate gene expression linked to gluconeogenesis	Nuclear receptor-interacting protein 1 Oxysterols receptor LXR-alpha Phosphoenolpyruvate carboxykinase, cytosolic [GTP] Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta	P19793 P28702 P35558 P48552 Q13133	LXRA NR1H3 NR2B1 NR2B2 NRIP1 PCK1 PEPCK1 RXRA RXRB	Homo sapiens (human)
SLBP independent Processing of Histone Pre-mRNAs	Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Small nuclear ribonucleoprotein E Small nuclear ribonucleoprotein F Small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein-associated proteins B and B' U7 snRNA-associated Sm-like protein LSm10 U7 snRNA-associated Sm-like protein LSm11 Zinc finger protein 473	P14678 P52298 P62304 P62306 P62308 P62318 P83369 Q09161 Q8WTR7 Q969L4	CBP20 CBP80 COD KIAA1141 LSM10 LSM11 NCBP NCBP1 NCBP2 PBSCF PBSCG SNRPB SNRPB1 SNRPD3 SNRPE SNRPF SNRPG ZFP100 ZNF473	Homo sapiens (human)
NOSIP mediated eNOS trafficking	Nitric oxide synthase 3 Nitric oxide synthase-interacting protein	P29474 Q9Y314	NOS3 NOSIP	Homo sapiens (human)

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