GlyCosmos Portal

Mus musculus (house mouse)

Summary

Taxonomy ID: 10090
PubChem Taxonomy: 10090

Genes (662) Glycans (1270) Glycoproteins (13000) Lectins (276) Pathways (1335)

Displaying entries **801 - 825** of **1335** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol
TNFR2 non-canonical NF-kB pathway	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 12 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 4 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 10B 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Baculoviral IAP repeat-containing protein 2 Baculoviral IAP repeat-containing protein 3 CD40 ligand Lymphotoxin-alpha Lymphotoxin-beta Mitogen-activated protein kinase kinase kinase 14 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator complex subunit 3 Proteasome activator complex subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type-8 Proteasome subunit beta type-10 Proteasome subunit beta type-11 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 TNF receptor-associated factor 2 TNF receptor-associated factor 3 Tumor necrosis factor ligand superfamily member 11 Tumor necrosis factor ligand superfamily member 12 Tumor necrosis factor ligand superfamily member 13B Tumor necrosis factor ligand superfamily member 14 Tumor necrosis factor receptor superfamily member 11A Tumor necrosis factor receptor superfamily member 12A Tumor necrosis factor receptor superfamily member 13C Tumor necrosis factor receptor superfamily member 1B Tumor necrosis factor receptor superfamily member 3 Tumor necrosis factor receptor superfamily member 5 Tumor necrosis factor	O08863 O09061 O35226 O35235 O35305 O35593 O35955 O54907 O55234 O70435 O88685 P06804 P09225 P14685 P25119 P26516 P27512 P27548 P28063 P28076 P39429 P41155 P46471 P49722 P50284 P54775 P61290 P62192 P62196 P62334 P70195 P97371 P97372 P99026 Q3TXS7 Q5SSW2 Q60692 Q60803 Q62210 Q8BG32 Q8BG41 Q8BHL8 Q8BJY1 Q8VDM4 Q99JI4 Q9CR00 Q9CR75 Q9CWH6 Q9CX56 Q9D8D0 Q9D8W5 Q9QUM9 Q9QYH9 Q9R1P0 Q9R1P1 Q9R1P3 Q9R1P4 Q9WU72 Q9WUL6 Q9WVJ2 Q9Z2U0 Q9Z2U1 Q9Z2X2	Baff Baffr Bcmd Birc2 Birc3 Br3 Cap-1 Cd40 Cd40l Cd40lg Craf1 Fgfrp2 Fn14 Kiaa0072 Kiaa0077 Light Lmp10 Lmp19 Lmp2 Lmp3 Lmp7 Lmpc3 Lta Ltb Ltbr Map3k14 Mc13 Mcb1 Mecl1 Mmc14 Mov-34 Mov34 Mss1 Nik Opgl P91a Pa28b1 Pad1 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma7l Psma8 Psmb1 Psmb10 Psmb11 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd4 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme3 Psme4 Psmf1 Rank Rankl Ring12 Sug1 Sug2 Tbp1 Tbp7 Tnf Tnfa Tnfb Tnfc Tnfcr Tnfr-2 Tnfr2 Tnfrsf11a Tnfrsf12a Tnfrsf13c Tnfrsf1b Tnfrsf3 Tnfrsf5 Tnfsf1 Tnfsf11 Tnfsf12 Tnfsf13b Tnfsf14 Tnfsf2 Tnfsf3 Tnfsf5 Traf2 Traf3 Trafamn Trance Tstap91a
Regulation of necroptotic cell death	Baculoviral IAP repeat-containing protein 2 Baculoviral IAP repeat-containing protein 3 Caspase-8 E3 ubiquitin-protein ligase CHIP E3 ubiquitin-protein ligase Itchy E3 ubiquitin-protein ligase XIAP E3 ubiquitin-protein ligase parkin E3 ubiquitin-protein ligase pellino homolog 1 FAS-associated death domain protein Flotillin-1 Flotillin-2 Heat shock protein HSP 90-alpha Hsp90 co-chaperone Cdc37 Mixed lineage kinase domain-like protein Polyubiquitin-B Polyubiquitin-C Programmed cell death 6-interacting protein Receptor-interacting serine/threonine-protein kinase 1 Receptor-interacting serine/threonine-protein kinase 3 Syntenin-1 TNF receptor-associated factor 2 Tumor necrosis factor receptor type 1-associated DEATH domain protein UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit Ubiquitin-conjugating enzyme E2 L3 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O08863 O08917 O08992 O89110 P07901 P0CG49 P0CG50 P39429 P62983 P62984 P68037 Q3U0V2 Q60634 Q60855 Q60989 Q61081 Q61160 Q62210 Q8C669 Q8C863 Q8CGY8 Q9D2Y4 Q9QZL0 Q9WU78 Q9WUD1 Q9WVS6	Aip1 Aipa Alix Api3 Birc2 Birc3 Birc4 Casp8 Cdc37 Chip Esa1 Fadd Flot1 Flot2 Hsp86 Hsp86-1 Hsp90aa1 Hspca Itch M17s1 Miha Mlkl Mort1 Ogt Park2 Pdcd6ip Peli1 Prkn Rinp Rip Rip3 Ripk1 Ripk3 Rps27a Sdcbp Stub1 Tradd Traf2 Uba52 Uba80 Ubb Ubc Ubce7 Ubcep1 Ubcep2 Ube2l3 Xiap
RNA Polymerase I Transcription Termination	CDK-activating kinase assembly factor MAT1 Caveolae-associated protein 1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase I subunit RPA12 DNA-directed RNA polymerase I subunit RPA1 DNA-directed RNA polymerase I subunit RPA2 DNA-directed RNA polymerase I subunit RPA34 DNA-directed RNA polymerase I subunit RPA43 DNA-directed RNA polymerase I subunit RPA49 DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Nucleolar transcription factor 1 TATA box-binding protein-associated factor RNA polymerase I subunit A TATA box-binding protein-associated factor RNA polymerase I subunit B TATA box-binding protein-associated factor RNA polymerase I subunit C TATA box-binding protein-associated factor RNA polymerase I subunit D TATA-box-binding protein Transcription termination factor 1	O08811 O35134 O54724 O70422 P25976 P29037 P49135 P51949 P52432 P61219 P62876 P70700 P97357 P97358 Q03147 Q61458 Q62187 Q63871 Q6PDZ2 Q76KJ5 Q78WZ7 Q791N7 Q80UW8 Q8K202 Q8K2X8 Q8VD76 Q923G2 Q9D4V4 Q9DBA9 Q9JIB4	Ase1 Btf2p44 Cak Cavin1 Ccnh Cd3eap Cdk7 Cdkn7 Crk4 D17Wsu155e Ercc2 Ercc3 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Josd3 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Paf49 Paf53 Polr1a Polr1b Polr1c Polr1e Polr1f Polr1g Polr1h Polr2e Polr2f Polr2h Polr2k Polr2l Praf1 Ptrf Rpa1 Rpa12 Rpa2 Rpo1-1 Rpo1-2 Rpo1-4 Taf1a Taf1b Taf1c Taf1d Tbp Tcfubf Tfiid Ttf1 Twistnb Ubf-1 Ubf1 Ubtf Xpb Xpbc Xpd Znrd1
Dissolution of Fibrin Clot	Alpha-2-antiplasmin Annexin A2 Glia-derived nexin Histidine-rich glycoprotein Plasminogen activator inhibitor 1 Plasminogen activator inhibitor 2, macrophage Plasminogen Protein S100-A10 Serpin B6 Serpin B8 Tissue-type plasminogen activator Urokinase plasminogen activator surface receptor Urokinase-type plasminogen activator	O08800 P06869 P07356 P08207 P11214 P12388 P20918 P22777 P35456 Q07235 Q60854 Q61247 Q9ESB3	Anx2 Anxa2 Cal1h Cal1l Hrg Mr1 Pai1 Pai2 Pi7 Planh1 Planh2 Plat Plau Plaur Plg Pli Pn1 S100a10 Serpinb2 Serpinb6 Serpinb6a Serpinb8 Serpine1 Serpine2 Serpinf2 Spi3 Spi4
mTORC1-mediated signalling	14-3-3 protein beta/alpha Eukaryotic elongation factor 2 kinase Eukaryotic translation initiation factor 4 gamma 1 Eukaryotic translation initiation factor 4B Eukaryotic translation initiation factor 4E-binding protein 1 Eukaryotic translation initiation factor 4E GTP-binding protein Rheb Neutral amino acid transporter 9 Peptidyl-prolyl cis-trans isomerase FKBP1A Proline-rich AKT1 substrate 1 Ragulator complex protein LAMTOR1 Ragulator complex protein LAMTOR2 Ragulator complex protein LAMTOR3 Ragulator complex protein LAMTOR4 Ragulator complex protein LAMTOR5 Ras-related GTP-binding protein A Ras-related GTP-binding protein B Ras-related GTP-binding protein C Ras-related GTP-binding protein D Regulatory-associated protein of mTOR Ribosomal protein S6 kinase beta-1 Serine/threonine-protein kinase mTOR Small ribosomal subunit protein eS6 Target of rapamycin complex subunit LST8	O08796 O88653 P26883 P62754 P63073 Q60876 Q6NTA4 Q6NZJ6 Q7TT45 Q80X95 Q8BGD6 Q8BGD9 Q8BSK8 Q8CF66 Q8K4Q0 Q921J2 Q99K70 Q9CQ22 Q9CQV8 Q9D1F4 Q9D1L9 Q9DCJ1 Q9JHS3 Q9JLN9	Akt1s1 Eef2k Eif4b Eif4e Eif4ebp1 Eif4g1 Fkbp1 Fkbp1a Frap Frap1 Gbl Hbxip Lamtor1 Lamtor2 Lamtor3 Lamtor4 Lamtor5 Lst8 Map2k1ip1 Mapbp Mapbpip Mapksp1 Mlst8 Mtor Pras Ragd Raptor Rheb Robld3 Rps6 Rps6kb1 Rptor Rraga Rragb Rragc Rragd Slc38a9 Xip Ywhab
HSP90 chaperone cycle for SHRs	Actin-related protein 10 Alpha-centractin Androgen receptor Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic dynein 1 light intermediate chain 1 Cytoplasmic dynein 1 light intermediate chain 2 DnaJ homolog subfamily A member 1 DnaJ homolog subfamily A member 2 DnaJ homolog subfamily A member 4 DnaJ homolog subfamily B member 1 Dynactin subunit 1 Dynactin subunit 2 Dynactin subunit 3 Dynactin subunit 4 Dynactin subunit 5 Dynactin subunit 6 Dynein light chain 1, cytoplasmic Dynein light chain 2, cytoplasmic F-actin-capping protein subunit alpha-1 F-actin-capping protein subunit alpha-2 F-actin-capping protein subunit alpha-3 F-actin-capping protein subunit beta Glucocorticoid receptor Heat shock 70 kDa protein 1-like Heat shock 70 kDa protein 1A Heat shock 70 kDa protein 1B Heat shock cognate 71 kDa protein Heat shock protein HSP 90-alpha Heat shock protein HSP 90-beta Heat shock-related 70 kDa protein 2 Mineralocorticoid receptor Peptidyl-prolyl cis-trans isomerase FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP5 Progesterone receptor Prostaglandin E synthase 3 Stress-induced-phosphoprotein 1	O08788 O88485 O88487 P06537 P07901 P11499 P16627 P17156 P17879 P19091 P30416 P47753 P47754 P47757 P61164 P63017 P63037 P63168 P70190 Q00175 Q60864 Q61696 Q64378 Q6PDL0 Q8CBY8 Q8R1Q8 Q8VII8 Q99KJ8 Q9D0M5 Q9JHU4 Q9JMC3 Q9QYJ0 Q9QYJ3 Q9QZB7 Q9QZB9 Q9R0Q7 Q9WUB4 Q9Z0Y1	Act11 Actr10 Actr11 Actr1a Ar Arp10 Arp11 Cappa1 Cappa2 Cappa3 Cappb1 Capza1 Capza2 Capza3 Capzb Ctrn1 Dctn1 Dctn2 Dctn3 Dctn4 Dctn5 Dctn6 Dhc1 Dlc1 Dlc2 Dnaj2 Dnaja1 Dnaja2 Dnaja4 Dnajb1 Dnch1 Dnchc1 Dnci1 Dnci2 Dncic1 Dncic2 Dncl1 Dnclc1 Dncli1 Dncli2 Dnclic1 Dnclic2 Dyhc Dync1h1 Dync1i1 Dync1i2 Dync1li1 Dync1li2 Dynll1 Dynll2 Fkbp4 Fkbp5 Fkbp51 Fkpb52 Grl Grl1 Gsg3 Hcp70.1 Hcp70.2 Hsc70 Hsc70t Hsc73 Hsj2 Hsp40 Hsp70-1 Hsp70-2 Hsp70-3 Hsp70A1 Hsp70a1 Hsp84 Hsp84-1 Hsp86 Hsp86-1 Hsp90aa1 Hsp90ab1 Hspa1 Hspa1a Hspa1b Hspa1l Hspa2 Hspa8 Hspc3 Hspca Hspcb Hspf1 Hspf4 Mlr Nr3c1 Nr3c2 Nr3c3 Nr3c4 Pgr Pr Ptges3 Sid3177 Stip1 Tebp Ws3
COPI-independent Golgi-to-ER retrograde traffic	1-acyl-sn-glycerol-3-phosphate acyltransferase gamma 85/88 kDa calcium-independent phospholipase A2 Actin-related protein 10 Alpha-centractin Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic dynein 1 light intermediate chain 1 Cytoplasmic dynein 1 light intermediate chain 2 Cytosolic phospholipase A2 Dynactin subunit 1 Dynactin subunit 2 Dynactin subunit 3 Dynactin subunit 4 Dynactin subunit 5 Dynactin subunit 6 Dynein light chain 1, cytoplasmic Dynein light chain 2, cytoplasmic F-actin-capping protein subunit alpha-1 F-actin-capping protein subunit alpha-2 F-actin-capping protein subunit alpha-3 F-actin-capping protein subunit beta Platelet-activating factor acetylhydrolase IB subunit alpha1 Platelet-activating factor acetylhydrolase IB subunit alpha2 Platelet-activating factor acetylhydrolase IB subunit beta Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 2 Protein bicaudal D homolog 1 Protein bicaudal D homolog 2 Rab3 GTPase-activating protein catalytic subunit Rab3 GTPase-activating protein non-catalytic subunit Ras-related protein Rab-18 Ras-related protein Rab-6A Ras-related protein Rab-6B	O08788 O08912 O88485 O88487 P35279 P35293 P47713 P47753 P47754 P47757 P61164 P61294 P63005 P63168 P70190 P97819 Q61205 Q61206 Q6PB93 Q6PDL0 Q80UJ7 Q8BMG7 Q8BR07 Q8CBY8 Q8R1Q8 Q921C5 Q99KJ8 Q9D0M5 Q9D517 Q9JHU4 Q9QZB7 Q9QZB9 Q9WUB4 Q9Z0Y1	Act11 Actr10 Actr11 Actr1a Agpat3 Arp10 Arp11 Bicd1 Bicd2 Cappa1 Cappa2 Cappa3 Cappb1 Capza1 Capza2 Capza3 Capzb Cpla2 Ctrn1 D9Bwg0185e Dctn1 Dctn2 Dctn3 Dctn4 Dctn5 Dctn6 Dhc1 Dlc1 Dlc2 Dnch1 Dnchc1 Dnci1 Dnci2 Dncic1 Dncic2 Dncl1 Dnclc1 Dncli1 Dncli2 Dnclic1 Dnclic2 Dyhc Dync1h1 Dync1i1 Dync1i2 Dync1li1 Dync1li2 Dynll1 Dynll2 Galnt1 Galnt2 Gsg3 Kiaa0066 Kiaa0699 Kiaa0839 Lis-1 Lis1 Lpaat3 Pafah1b1 Pafah1b2 Pafah1b3 Pafaha Pafahb Pafahg Pla2g4 Pla2g4a Pla2g6 Pnpla9 Rab18 Rab3gap Rab3gap1 Rab3gap2 Rab6 Rab6a Rab6b Ws3
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway	Bifunctional polynucleotide phosphatase/kinase DNA ligase 3 DNA polymerase beta DNA repair protein XRCC1 Endonuclease 8-like 1 Endonuclease 8-like 2 N-glycosylase/DNA lyase	O08760 P97386 Q60596 Q6R2P8 Q8K409 Q8K4Q6 Q9JLV6	Gm1212 Lig3 Nei1 Neil1 Neil2 Ogg1 Pnkp Polb Xrcc-1 Xrcc1
Cleavage of the damaged pyrimidine	Endonuclease 8-like 1 Endonuclease 8-like 2 Endonuclease III-like protein 1 G/T mismatch-specific thymine DNA glycosylase Methyl-CpG-binding domain protein 4 N-glycosylase/DNA lyase Single-strand selective monofunctional uracil DNA glycosylase Uracil-DNA glycosylase	O08760 O35980 P56581 P97931 Q6P5C5 Q6R2P8 Q8K4Q6 Q9Z2D7	Gm1212 Mbd4 Nei1 Neil1 Neil2 Nth1 Nthl1 Ogg1 Smug1 Tdg Ung Ung1
Displacement of DNA glycosylase by APEX1	Adenine DNA glycosylase DNA repair nuclease/redox regulator APEX1 DNA-3-methyladenine glycosylase Endonuclease III-like protein 1 G/T mismatch-specific thymine DNA glycosylase Methyl-CpG-binding domain protein 4 N-glycosylase/DNA lyase Single-strand selective monofunctional uracil DNA glycosylase Uracil-DNA glycosylase	O08760 O35980 P28352 P56581 P97931 Q04841 Q6P5C5 Q99P21 Q9Z2D7	Ape Apex Apex1 Mbd4 Mid1 Mpg Mutyh Myh Nth1 Nthl1 Ogg1 Ref1 Smug1 Tdg Ung Ung1
Succinyl-CoA Biosynthesis	2-oxoglutarate dehydrogenase complex component E1 Alpha-ketoglutarate dehydrogenase component 4 Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial	O08749 Q60597 Q9CQX8 Q9D2G2	Dld Dlst Kgd4 Kiaa4192 Mrps36 Ogdh
Glycine degradation	2-oxoglutarate dehydrogenase complex component E1 Alpha-ketoglutarate dehydrogenase component 4 Aminomethyltransferase, mitochondrial Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial Glycine cleavage system H protein, mitochondrial Glycine dehydrogenase (decarboxylating), mitochondrial	O08749 Q60597 Q8CFA2 Q91W43 Q91WK5 Q9CQX8 Q9D2G2	Amt Dld Dlst Gcsh Gldc Kgd4 Kiaa4192 Mrps36 Ogdh
PDH complex synthesizes acetyl-CoA from PYR	Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial Pyruvate dehydrogenase E1 component subunit beta, mitochondrial Pyruvate dehydrogenase protein X component, mitochondrial	O08749 P35486 P35487 Q8BKZ9 Q8BMF4 Q9D051	Dlat Dld Pdha-1 Pdha-2 Pdha1 Pdha2 Pdhal Pdhb Pdhx
Regulation of pyruvate dehydrogenase (PDH) complex	Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Maleylacetoacetate isomerase NAD-dependent protein lipoamidase sirtuin-4, mitochondrial Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial Pyruvate dehydrogenase E1 component subunit beta, mitochondrial Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial Pyruvate dehydrogenase protein X component, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial	O08749 O70571 P35486 P35487 Q3UV70 Q504M2 Q7TSQ8 Q8BFP9 Q8BKZ9 Q8BMF4 Q8R216 Q922H2 Q9D051 Q9JK42 Q9WVL0	Dlat Dld Gstz1 Kiaa1990 Maai Pdha-1 Pdha-2 Pdha1 Pdha2 Pdhal Pdhb Pdhx Pdk1 Pdk2 Pdk3 Pdk4 Pdp1 Pdp2 Pdpr Ppm2c Sir2l4 Sirt4
Signaling by Retinoic Acid	Carnitine O-palmitoyltransferase 1, liver isoform Carnitine O-palmitoyltransferase 1, muscle isoform Cellular retinoic acid-binding protein 2 Dihydrolipoyl dehydrogenase, mitochondrial Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial Fatty acid-binding protein 5 Peroxisome proliferator-activated receptor delta Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial Pyruvate dehydrogenase E1 component subunit beta, mitochondrial Pyruvate dehydrogenase protein X component, mitochondrial Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta Retinoic acid receptor RXR-gamma Retinoic acid receptor alpha Retinoic acid receptor beta Retinoic acid receptor gamma [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial	O08749 O70571 P11416 P18911 P22605 P22935 P28700 P28704 P28705 P35396 P35486 P35487 P97742 Q05816 Q8BFP9 Q8BKZ9 Q8BMF4 Q922H2 Q924X2 Q9D051 Q9JK42	Cpt-1 Cpt1 Cpt1a Cpt1b Crabp2 Dlat Dld Fabp5 Fabpe Klbp Mal1 Nr1b1 Nr1b2 Nr1b3 Nr1c2 Nr2b1 Nr2b2 Nr2b3 Pdha-1 Pdha-2 Pdha1 Pdha2 Pdhal Pdhb Pdhx Pdk1 Pdk2 Pdk3 Pdk4 Pparb Ppard Rara Rarb Rarg Rxra Rxrb Rxrg
Branched-chain amino acid catabolism	2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial 3-hydroxyacyl-CoA dehydrogenase type-2 3-hydroxyisobutyrate dehydrogenase, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial Acetyl-CoA acetyltransferase, mitochondrial Branched-chain alpha-ketoacid dehydrogenase kinase Branched-chain-amino-acid aminotransferase, cytosolic Branched-chain-amino-acid aminotransferase, mitochondrial Dihydrolipoyl dehydrogenase, mitochondrial Enoyl-CoA hydratase, mitochondrial Isobutyryl-CoA dehydrogenase, mitochondrial Isovaleryl-CoA dehydrogenase, mitochondrial Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial Methylglutaconyl-CoA hydratase, mitochondrial Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial Protein phosphatase Mn(2+)-dependent 1K Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial	O08749 O08756 O35855 O55028 P24288 P50136 P53395 Q3ULD5 Q6P3A8 Q8BH95 Q8BXN7 Q8QZS1 Q8QZT1 Q99L13 Q99MR8 Q9D7B6 Q9DBL1 Q9EQ20 Q9JHI5 Q9JLZ3	Acad8 Acadsb Acat1 Aldh6a1 Auh Bcat1 Bcat2 Bcatm Bckdha Bckdhb Bckdk Dbt Dld Eca39 Eca40 Echs1 Erab Hadh2 Hibadh Hibch Hsd17b10 Ivd Mcca Mccc1 Mccc2 Pp2cm Ppm1k
Platelet Aggregation (Plug Formation)	Platelet glycoprotein IX Platelet glycoprotein Ib alpha chain Platelet glycoprotein Ib beta chain Platelet glycoprotein V Prothrombin von Willebrand factor	O08742 O35930 O88186 P19221 P56400 Q8CIZ8	Cf2 F2 Gp1ba Gp1bb Gp5 Gp9 Vwf
Platelet Adhesion to exposed collagen	A disintegrin and metalloproteinase with thrombospondin motifs 13 High affinity immunoglobulin epsilon receptor subunit gamma Platelet glycoprotein IX Platelet glycoprotein Ib alpha chain Platelet glycoprotein Ib beta chain Platelet glycoprotein V Platelet glycoprotein VI Tyrosine-protein kinase Fyn Tyrosine-protein kinase Lyn von Willebrand factor	O08742 O35930 O88186 P0C191 P20491 P25911 P39688 P56400 Q769J6 Q8CIZ8	Adamts13 Fce1g Fcer1g Fyn Gm710 Gp1ba Gp1bb Gp5 Gp6 Gp9 Lyn Vwf
GP1b-IX-V activation signalling	14-3-3 protein zeta/delta Filamin-A Phosphatidylinositol 3-kinase regulatory subunit alpha Platelet glycoprotein IX Platelet glycoprotein Ib alpha chain Platelet glycoprotein Ib beta chain Platelet glycoprotein V Proto-oncogene tyrosine-protein kinase Src RAF proto-oncogene serine/threonine-protein kinase von Willebrand factor	O08742 O35930 O88186 P05480 P26450 P56400 P63101 Q8BTM8 Q8CIZ8 Q99N57	Craf Fln Fln1 Flna Gp1ba Gp1bb Gp5 Gp9 Pik3r1 Raf1 Src Vwf Ywhaz
Intrinsic Pathway of Fibrin Clot Formation	Alpha-2-macroglobulin-P Antithrombin-III Coagulation factor IX Coagulation factor VIII Coagulation factor X Coagulation factor XI Coagulation factor XII Complement component 1 Q subcomponent-binding protein, mitochondrial Glia-derived nexin HMW kininogen-II Heparin cofactor 2 Lysosomal Pro-X carboxypeptidase Plasma kallikrein Plasma protease C1 inhibitor Plasma serine protease inhibitor Platelet glycoprotein IX Platelet glycoprotein Ib alpha chain Platelet glycoprotein Ib beta chain Platelet glycoprotein V Prothrombin Vitamin K-dependent protein C Vitamin K-dependent protein S von Willebrand factor	O08742 O35658 O35930 O88186 O88947 P16294 P19221 P26262 P32261 P33587 P49182 P56400 P70458 P97290 Q06194 Q07235 Q08761 Q6GQT1 Q6S9I3 Q7TMR0 Q80YC5 Q8CIZ8 Q91Y47	A2m A2mp At3 C1nh C1qbp Cf2 Cf8 Cf9 F10 F11 F12 F2 F8 F8c F9 Gc1qbp Gp1ba Gp1bb Gp5 Gp9 Hcf2 Hcii Klk3 Klkb1 Kng2 Pci Pi7 Pk Pn1 Prcp Proc Pros Pros1 Serpina5 Serpinc1 Serpind1 Serpine2 Serping1 Spi4 Vwf
FGFR2 alternative splicing	DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Heterogeneous nuclear ribonucleoprotein A1 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Polypyrimidine tract-binding protein 1	O08740 P08775 P17225 P49312 P60898 P61219 P62488 P62876 P97760 Q3THK3 Q3UYV9 Q63871 Q80UW8 Q8CFI7 Q8R0A0 Q923G2 Q9CQ49 Q9D7M8	Cbp20 Cbp80 Fli-2 Gtf2f1 Gtf2f2 Hnrnpa1 Hnrpa1 Mt1a Ncbp1 Ncbp2 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Ptb Ptbp1 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Tis
Formation of the Early Elongation Complex	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor SPT4-A Transcription elongation factor SPT5	O08740 O08811 O55201 O70422 P08775 P19426 P49135 P51949 P60898 P61219 P62488 P62876 P63271 P97760 Q03147 Q3THK3 Q3UYV9 Q61458 Q63871 Q7TSG2 Q80UW8 Q8BG30 Q8C4Y3 Q8CFI7 Q8K2X8 Q8R0A0 Q8VD76 Q922L6 Q923G2 Q9CQ49 Q9D7M8 Q9DBA9 Q9JIB4	Btf2p44 Cak Cbp20 Cbp80 Ccnh Cdk7 Cdkn7 Cobra1 Crk4 Ctdp1 D17Wsu155e D17h6s45 Ercc2 Ercc3 Fcp1 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Ncbp1 Ncbp2 Nelfa Nelfb Nelfcd Nelfd Nelfe Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Spt4h Supt4a Supt4h Supt4h1a Supt5 Supt5h Th1 Th1l Whsc2 Whsc2h Xpb Xpbc Xpd
RNA Pol II CTD phosphorylation and interaction with CE	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Transcription elongation factor SPT5 mRNA cap guanine-N7 methyltransferase mRNA-capping enzyme	O08740 O08811 O55201 O55236 O70422 P08775 P49135 P51949 P60898 P61219 P62488 P62876 P97760 Q03147 Q3THK3 Q61458 Q63871 Q80UW8 Q8CFI7 Q8K2X8 Q8R0A0 Q8VD76 Q923G2 Q9D0L8 Q9D7M8 Q9DBA9 Q9JIB4	Btf2p44 Cak Cap1a Ccnh Cdk7 Cdkn7 Crk4 D17Wsu155e Ercc2 Ercc3 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Kiaa0398 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rngtt Rnmt Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Supt5 Supt5h Xpb Xpbc Xpd
mRNA Capping	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Transcription elongation factor SPT5 mRNA cap guanine-N7 methyltransferase mRNA-capping enzyme	O08740 O08811 O55201 O55236 O70422 P08775 P49135 P51949 P60898 P61219 P62488 P62876 P97760 Q03147 Q3THK3 Q3UYV9 Q61458 Q63871 Q80UW8 Q8CFI7 Q8K2X8 Q8R0A0 Q8VD76 Q923G2 Q9CQ49 Q9D0L8 Q9D7M8 Q9DBA9 Q9JIB4	Btf2p44 Cak Cap1a Cbp20 Cbp80 Ccnh Cdk7 Cdkn7 Crk4 D17Wsu155e Ercc2 Ercc3 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Kiaa0398 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Ncbp1 Ncbp2 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rngtt Rnmt Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Supt5 Supt5h Xpb Xpbc Xpd
TP53 Regulates Transcription of DNA Repair Genes	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 12 Cyclin-dependent kinase 13 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4-A Transcription elongation factor SPT5	O08740 O08811 O08856 O55201 O70422 O88874 P08775 P10711 P19426 P49135 P51949 P60898 P61219 P62488 P62869 P62876 P63271 P83940 P97760 Q03147 Q08943 Q14AX6 Q3THK3 Q61458 Q63871 Q69ZA1 Q7TQK0 Q7TSG2 Q80UW8 Q8BG30 Q8C4Y3 Q8CB77 Q8CFI7 Q8K2X8 Q8R0A0 Q8VD76 Q920B9 Q922L6 Q923G2 Q99J95 Q9D7M8 Q9DBA9 Q9JIB4 Q9QWV9	Btf2p44 Cak Ccnh Ccnk Ccnt1 Ccnt2 Cdc2l5 Cdk12 Cdk13 Cdk7 Cdk9 Cdkn7 Cobra1 Crk4 Crk7 Crkrs Ctdp1 D17Wsu155e D17h6s45 Ell Eloa Elob Eloc Ercc2 Ercc3 Fact140 Factp140 Fcp1 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Kiaa0904 Kiaa1791 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Nelfa Nelfb Nelfcd Nelfd Nelfe Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Spt4h Ssrp1 Supt16 Supt16h Supt4a Supt4h Supt4h1a Supt5 Supt5h Tcea1 Tceat Tceb1 Tceb2 Tceb3 Th1 Th1l Whsc2 Whsc2h Xpb Xpbc Xpd

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