GlyCosmos Portal

Mus musculus (house mouse)

Summary

Taxonomy ID: 10090
PubChem Taxonomy: 10090

Genes (662) Glycans (1270) Glycoproteins (13000) Lectins (276) Pathways (1335)

Displaying entries **251 - 275** of **1335** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol
Golgi Associated Vesicle Biogenesis	ADP-ribosylation factor 1 AP-1 complex subunit beta-1 AP-1 complex subunit gamma-1 AP-1 complex subunit mu-1 AP-1 complex subunit mu-2 AP-1 complex subunit sigma-1A AP-1 complex subunit sigma-2 AP-1 complex subunit sigma-3 AP-3 complex subunit beta-1 AP-3 complex subunit sigma-1 AP-4 complex subunit beta-1 AP-4 complex subunit epsilon-1 Adaptin ear-binding coat-associated protein 1 Alpha-soluble NSF attachment protein Auxilin Beta-arrestin-1 Biogenesis of lysosome-related organelles complex 1 subunit 1 Biogenesis of lysosome-related organelles complex 1 subunit 3 Biogenesis of lysosome-related organelles complex 1 subunit 4 Biogenesis of lysosome-related organelles complex 1 subunit 6 Carboxypeptidase D Cation-independent mannose-6-phosphate receptor Clathrin heavy chain 1 Clathrin interactor 1 Clathrin light chain A Cyclin-G-associated kinase Dynamin-2 Dysbindin Endophilin-A1 Ferritin heavy chain Ferritin light chain 2 Golgi resident protein GCP60 Golgin B1 Heat shock cognate 71 kDa protein Huntingtin-interacting protein 1-related protein Inositol polyphosphate 5-phosphatase OCRL Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha Phosphatidylinositol-binding clathrin assembly protein Protein YIPF6 Pumilio homolog 1 Ras-related protein Rab-5C SH3 domain-containing protein 19 SNARE-associated protein Snapin Sortilin Sorting nexin-2 Sorting nexin-5 Sorting nexin-9 TBC1 domain family member 8B Thioredoxin domain-containing protein 5 Trans-Golgi network integral membrane protein 1 Transferrin receptor protein 1 Tumor protein D52 Tumor protein D53 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	A3KGB4 E9PVZ8 O08585 O35643 O54818 O55102 O70404 O89001 P09528 P22892 P35278 P35585 P39054 P49945 P61967 P63017 P63044 P84078 Q07113 Q5U5M8 Q61194 Q62313 Q62351 Q62393 Q62420 Q68FD5 Q6NVF0 Q6PHU5 Q7M6Y3 Q7TN05 Q80TZ3 Q80U78 Q80V94 Q8BMP6 Q8BR70 Q8BWG8 Q8VED2 Q91VH2 Q91W90 Q91WZ8 Q91X43 Q99KN9 Q99KY4 Q9CR95 Q9CWK8 Q9D8U8 Q9DB05 Q9DB50 Q9DCR2 Q9JKY5 Q9R0C0 Q9WV76 Q9WVP1 Q9Z1T1 Q9Z266	Acbd3 Adtb1 Adtg Ap19 Ap1b1 Ap1g1 Ap1m1 Ap1m2 Ap1s1 Ap1s2 Ap1s3 Ap3b1 Ap3s1 Ap4b1 Ap4e1 Arf1 Arrb1 Bloc1s1 Bloc1s3 Bloc1s4 Bloc1s6 Bloc1s7 Bloc1s8 Blos3 Calm Clapg1 Clint1 Clta Cltc Cltnm Cno Cpd Cpk DNAJC26 Dnajc6 Dnm2 Dtnbp1 Dyn2 Een1 Enth Epn4 Epnr Fit1 Fth Fth1 Ftl-2 Ftl2 Gak Gcn5l1 Gcp60 Golgb1 Hip1r Hsc70 Hsc73 Hspa8 Igf2r Kiaa0099 Kiaa0171 Kiaa0473 Napa Necap1 Ocrl Ocrl1 P2 Pa Pap7 Picalm Pik3c2a Pldn Pum1 Rab5c Rp Sdy Sh3d19 Sh3d2a Sh3gl2 Snap25bp Snapa Snapap Snapin Snx2 Snx5 Snx9 Sort1 Syb2 Tbc1d8b Tfrc Tgoln1 Tlp46 Tpd52 Tpd52l1 Trfr Ttgn1 Txndc5 Vamp2 Vamp8 Yipf6
Intra-Golgi traffic	ADP-ribosylation factor 1 Alkaline phosphatase, germ cell type Alkaline phosphatase Alpha-soluble NSF attachment protein BET1-like protein Beta-soluble NSF attachment protein Conserved oligomeric Golgi complex subunit 1 Conserved oligomeric Golgi complex subunit 2 Conserved oligomeric Golgi complex subunit 3 Conserved oligomeric Golgi complex subunit 4 Conserved oligomeric Golgi complex subunit 5 Conserved oligomeric Golgi complex subunit 6 Conserved oligomeric Golgi complex subunit 7 Conserved oligomeric Golgi complex subunit 8 Cytohesin-1 Cytohesin-2 Cytohesin-3 Cytohesin-4 Gamma-soluble NSF attachment protein Golgi SNAP receptor complex member 1 Golgi SNAP receptor complex member 2 Guanine nucleotide exchange factor subunit RIC1 Intestinal-type alkaline phosphatase RAB6A-GEF complex partner protein 2 Ras-related protein Rab-30 Ras-related protein Rab-33B Ras-related protein Rab-36 Ras-related protein Rab-39A Synaptobrevin homolog YKT6 Synaptosomal-associated protein 29 Syntaxin-16 Syntaxin-5 Syntaxin-6 Thyroid hormone receptor interactor 11 Vacuolar protein sorting-associated protein 45 Vesicle transport through interaction with t-SNAREs homolog 1A Vesicle-fusing ATPase	E9Q512 F8VPQ6 O08967 O35153 O35166 O35963 O88630 O89116 P24822 P24823 P28663 P46460 P63034 P84078 P97390 Q3UM29 Q69ZJ7 Q80YW0 Q8BHD0 Q8BHT7 Q8BVI5 Q8C0L8 Q8CAM5 Q8CI04 Q8K1E0 Q8R1U1 Q8R3I3 Q921L5 Q923S9 Q9CQW1 Q9CWZ7 Q9DB05 Q9ERB0 Q9JJA2 Q9JKK1 Q9QX11 Q9Z160	Akp-3 Akp3 Akp5 Alpg Alpi Alppl2 Arf1 Bet1l Cog1 Cog2 Cog3 Cog4 Cog5 Cog6 Cog7 Cog8 Cyth1 Cyth2 Cyth3 Cyth4 Eap Gosr1 Gosr2 Grp1 Gs15 Gs27 Gs28 Iap Kiaa0258 Kiaa1134 Kiaa1432 Ldlb Ldlc Napa Napb Napg Nsf Pscd1 Pscd2 Pscd3 Pscd4 Rab30 Rab33b Rab36 Rab39 Rab39a Rgp1 Ric1 Rsb30 Sec7b Skd2 Snap29 Snapa Snapb Snapg Stx16 Stx5 Stx5a Stx6 Trip11 Vps45 Vps45a Vti1 Vti1a Vti1l2 Ykt6
Glycosphingolipid transport	ADP-ribosylation factor 1 Battenin Ceramide-1-phosphate transfer protein Extended synaptotagmin-1 Extended synaptotagmin-2 Extended synaptotagmin-3 Glycolipid transfer protein Pleckstrin homology domain-containing family A member 8	P84078 Q3TZZ7 Q3U7R1 Q5DTI8 Q61124 Q80W71 Q8BS40 Q9JL62	Arf1 Cln3 Cptp D12Ertd551e D9Ertd280e Esyt1 Esyt2 Esyt3 Fam62a Fam62b Fam62c Fapp2 Gltp Gltpd1 Kiaa4186 Mbc2 Plekha8
Synthesis of PIPs at the plasma membrane	ADP-ribosylation factor 1 Cytoplasmic tyrosine-protein kinase BMX Inositol polyphosphate 5-phosphatase K Inositol polyphosphate 5-phosphatase OCRL Inositol polyphosphate-4-phosphatase type I A Myotubularin-related protein 14 Myotubularin-related protein 1 Myotubularin-related protein 3 Myotubularin-related protein 6 Myotubularin-related protein 9 Myotubularin Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 Phosphatidylinositol 3-kinase C2 domain-containing subunit gamma Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 3-kinase regulatory subunit gamma Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A Phosphatidylinositol 4-kinase type 2-alpha Phosphatidylinositol 4-kinase type 2-beta Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha Phosphatidylinositol 4-phosphate 5-kinase type-1 beta Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha Phosphatidylinositol 5-phosphate 4-kinase type-2 beta Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta Phosphoinositide 3-kinase regulatory subunit 5 Phosphoinositide 3-kinase regulatory subunit 6 Pleckstrin homology domain containing, family A member 5 Pleckstrin homology domain-containing family A member 1 Pleckstrin homology domain-containing family A member 2 Pleckstrin homology domain-containing family A member 3 Pleckstrin homology domain-containing family A member 4 Pleckstrin homology domain-containing family A member 6 Pleckstrin homology domain-containing family A member 8 RUN and FYVE domain-containing protein 1 Ras-related protein Rab-14 Ras-related protein Rab-4A Ras-related protein Rab-5A Synaptojanin-1 Synaptojanin-2 Type II inositol 3,4-bisphosphate 4-phosphatase Tyrosine-protein phosphatase non-receptor type 13	E9Q6H8 E9QAN8 O08586 O08908 O35904 O70161 O70167 O70172 P26450 P42337 P56371 P59644 P70181 P70182 P84078 P97504 Q2TBE6 Q3U6Q4 Q5SW28 Q61194 Q64143 Q64512 Q6NVF0 Q6P1Y8 Q6P549 Q7TQG1 Q80W71 Q80XI4 Q8BIJ7 Q8BTI9 Q8BUL6 Q8C5L6 Q8CBQ5 Q8CHC4 Q8K296 Q8VC98 Q8VE11 Q8VEL2 Q91V41 Q91XU3 Q9CQD1 Q9D2G5 Q9EPW0 Q9ERS4 Q9ERS5 Q9ES52 Q9JHG7 Q9Z2C4 Q9Z2C5 Q9Z2D0	7a33 Arf1 Bmx Cpk Fapp1 Fapp2 Inpp4a Inpp4b Inpp5d Inpp5j Inpp5k Inppl1 Kiaa0348 Kiaa0589 Kiaa0910 Mmac1 Mtm1 Mtmr1 Mtmr14 Mtmr3 Mtmr6 Mtmr9 Ocrl Ocrl1 Pepp1 Pepp3 Pi3kg1 Pi4k2a Pi4k2b Pi5p4ka Pib5pa Pik3c2a Pik3c2b Pik3c2g Pik3ca Pik3cb Pik3cd Pik3cg Pik3r1 Pik3r2 Pik3r3 Pik3r5 Pik3r6 Pip4k2a Pip4k2b Pip4k2c Pip5k1a Pip5k1b Pip5k1c Pip5k2a Pip5k2b Pip5k2c Plekha1 Plekha2 Plekha3 Plekha4 Plekha5 Plekha6 Plekha8 Pps Pten Ptp14 Ptpn13 Rab14 Rab4 Rab4a Rab5a Rabip4 Rufy1 Ship Ship1 Ship2 Skip Synj1 Synj2 Tapp1 Tapp2 nnyRab5a
trans-Golgi Network Vesicle Budding	ADP-ribosylation factor 1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 Synaptosomal-associated protein 23 Syntaxin-4 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	O09044 O70404 P63044 P70452 P84078 Q6DFZ1	Arf1 Gbf1 Snap23 Sndt Stx4 Stx4a Syb2 Vamp2 Vamp8
VxPx cargo-targeting to cilium	ADP-ribosylation factor 4 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 Cyclic nucleotide-gated channel alpha-2 Cyclic nucleotide-gated channel alpha-4 Cyclic nucleotide-gated channel beta-1 Exocyst complex component 1 Exocyst complex component 2 Exocyst complex component 3 Exocyst complex component 4 Exocyst complex component 5 Exocyst complex component 6 Exocyst complex component 7 Exocyst complex component 8 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 Polycystin-1 Polycystin-2 Rab-3A-interacting protein Rab11 family-interacting protein 3 Ras-related protein Rab-11A Ras-related protein Rab-8A Rhodopsin	E1AZ71 O08852 O35245 O35250 O35382 P15409 P55258 P61750 P62492 Q3TPX4 Q3UW12 Q62398 Q68EF0 Q6DFZ1 Q6KAR6 Q6PGF7 Q8CHD8 Q8R313 Q8R3S6 Q9D4H1 Q9QWY8	Arf4 Asap1 Cncg2 Cncg4 Cnga2 Cnga4 Cngb1 Ddef1 Exo70 Exoc1 Exoc2 Exoc3 Exoc4 Exoc5 Exoc6 Exoc7 Exoc8 Gbf1 Kiaa0665 Kiaa1249 Mel Pkd1 Pkd2 Rab11 Rab11a Rab11fip3 Rab3ip Rab8 Rab8a Rabin8 Rho Sec10l1 Sec15a Sec15l1 Sec3 Sec3l1 Sec5 Sec5l1 Sec6l1 Sec8 Sec8l1 Shag1 TRPP2
Clathrin-mediated endocytosis	ADP-ribosylation factor 6 ADP-ribosylation factor GTPase-activating protein 1 AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-2 AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma AP2-associated protein kinase 1 Actin-related protein 2/3 complex subunit 1A Actin-related protein 2/3 complex subunit 2 Actin-related protein 2/3 complex subunit 3 Actin-related protein 2/3 complex subunit 4 Actin-related protein 2/3 complex subunit 5 Actin-related protein 2 Actin-related protein 3 Adaptin ear-binding coat-associated protein 1 Adaptin ear-binding coat-associated protein 2 Amphiphysin Amphiregulin Apolipoprotein B-100 Arf-GAP domain and FG repeat-containing protein 1 Auxilin Beta-2 adrenergic receptor Beta-arrestin-1 Beta-arrestin-2 Cation-dependent mannose-6-phosphate receptor Cation-independent mannose-6-phosphate receptor Cdc42-interacting protein 4 Clathrin coat assembly protein AP180 Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Cyclin-G-associated kinase Cystic fibrosis transmembrane conductance regulator Disabled homolog 2 Dynamin-1 Dynamin-2 Dynamin-3 Dyslexia-associated protein KIAA0319 homolog E3 ubiquitin-protein ligase CBL Endophilin-A1 Endophilin-A2 Endophilin-A3 Epidermal growth factor receptor substrate 15-like 1 Epidermal growth factor receptor substrate 15 Epidermal growth factor receptor Epigen Epsin-1 Epsin-2 F-BAR domain only protein 1 F-BAR domain only protein 2 Formin-binding protein 1-like Formin-binding protein 1 Frizzled-4 GTPase-activating protein and VPS9 domain-containing protein 1 Heat shock cognate 71 kDa protein Hepatocyte growth factor-regulated tyrosine kinase substrate Huntingtin-interacting protein 1-related protein Huntingtin-interacting protein 1 Inositol polyphosphate 5-phosphatase OCRL Interleukin-7 receptor subunit alpha Intersectin-1 Intersectin-2 Low density lipoprotein receptor adapter protein 1 Low-density lipoprotein receptor-related protein 2 Low-density lipoprotein receptor Lysosome membrane protein 2 Muscarinic acetylcholine receptor M2 Myc box-dependent-interacting protein 1 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma Phosphatidylinositol-binding clathrin assembly protein Polyubiquitin-B Polyubiquitin-C Pro-epidermal growth factor Probetacellulin Proepiregulin Proheparin-binding EGF-like growth factor Protein Wnt-5a Protein kinase C and casein kinase II substrate protein 3 Protein kinase C and casein kinase substrate in neurons protein 1 Protein kinase C and casein kinase substrate in neurons protein 2 Protransforming growth factor alpha RalBP1-associated Eps domain-containing protein 1 RalBP1-associated Eps domain-containing protein 2 Ras-related protein Rab-5A Ras-related protein Rab-5B Ras-related protein Rab-5C SH3 domain-containing kinase-binding protein 1 Segment polarity protein dishevelled homolog DVL-2 Serotransferrin Signal transducing adapter molecule 1 Signal transducing adapter molecule 2 Solute carrier family 2, facilitated glucose transporter member 8 Sorting nexin-18 Sorting nexin-9 Stonin-1 Stonin-2 Substance-P receptor Synaptojanin-1 Synaptojanin-2 Synaptotagmin-11 Synaptotagmin-1 Synaptotagmin-2 Synaptotagmin-8 Synaptotagmin-9 T-cell surface glycoprotein CD3 delta chain T-cell surface glycoprotein CD3 gamma chain T-cell surface glycoprotein CD4 Trans-Golgi network integral membrane protein 1 Transferrin receptor protein 1 Type-1 angiotensin II receptor A Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Vasopressin V2 receptor Vasopressin-neurophysin 2-copeptin Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 3 Vesicle-associated membrane protein 4 Vesicle-associated membrane protein 8 Vesicular acetylcholine transporter	A2ARV4 E9Q414 O08539 O08585 O35114 O35304 O54916 O70161 O70404 O70480 O88721 O88811 P01132 P04235 P06332 P0CG49 P0CG50 P11942 P16872 P17426 P17427 P18762 P22682 P22725 P24668 P26361 P29754 P30548 P31955 P35278 P35455 P35951 P39053 P39054 P42567 P46096 P46097 P48030 P59999 P61021 P61161 P62331 P62743 P62983 P62984 P63017 P63024 P63044 P70297 P84091 P98078 Q01279 Q05928 Q06186 Q07113 Q3UHJ0 Q3UQN2 Q5SZV5 Q60838 Q60902 Q61088 Q61194 Q61521 Q61548 Q61644 Q62313 Q62351 Q62419 Q62420 Q62421 Q68FD5 Q6IRU5 Q6NVF0 Q6PAR5 Q7M6Y3 Q7TQF7 Q80TY0 Q80TZ3 Q80VP1 Q80XA6 Q8BWG8 Q8BZ60 Q8BZ98 Q8C142 Q8CDJ8 Q8CHC4 Q8CHU3 Q8CJ53 Q8K012 Q8K285 Q8K2K6 Q8R550 Q8VD75 Q91VH2 Q91YI4 Q91ZR2 Q921I1 Q924X1 Q99JB8 Q99JY9 Q99KY4 Q99LI8 Q9CPW4 Q9CQD1 Q9CR95 Q9CVB6 Q9D1J1 Q9D2G5 Q9DBG3 Q9EPJ9 Q9ERZ4 Q9JIF3 Q9JKY5 Q9JM76 Q9R0N3 Q9R0N6 Q9R0N9 Q9R0Q6 Q9WVE8 Q9Z0R4 Q9Z0R6	46mpr Aak1 Abcc7 Actr2 Actr3 Adrb2 Adrb2r Adtaa Adtab Agfg1 Agtr1 Agtr1a Amph Amph1 Amphl Ap17 Ap2a1 Ap2a2 Ap2b1 Ap2m1 Ap2s1 Apob Arc20 Areg Arf1gap Arf6 Arfgap1 Arh Arp2 Arp3 Arpc1a Arpc2 Arpc3 Arpc4 Arpc5 Arrb1 Arrb2 Avp Avpr2 Bcn Bin1 Btc Calm Cbl Cd3d Cd3g Cd4 Cftr Chrm-2 Chrm2 Cip4 Clapa1 Clapb1 Clapm1 Claps2 Clta Cltb Cltc Cpk DNAJC26 Dab2 Dnajc6 Dnm Dnm1 Dnm2 Dnm3 Doc2 Dtr Dvl2 Dyn2 Een1 Egf Egfr Epgn Epn1 Epn2 Eps15 Eps15-rs Eps15R Eps15l1 Ereg Ese1 Ese2 Fbp17 Fcho1 Fcho2 Fit1 Fnbp1 Fnbp1l Fzd4 Gak Gapex5 Gapvd1 Glut8 GlutX1 Hbegf Hbp Hegfl Hgs Hip1 Hip1r Hrb Hrs Hsc70 Hsc73 Hspa8 Igf2r Il7r Itsn Itsn1 Itsn2 Kiaa0319 Kiaa0348 Kiaa0473 Kiaa0554 Kiaa0589 Kiaa0820 Kiaa0910 Kiaa1048 Kiaa1521 Kiaa4093 Kiaa4113 Ldlr Ldlrap1 Lrp2 M6pr Necap1 Necap2 Ocrl Ocrl1 Pacsin Pacsin1 Pacsin2 Pacsin3 Picalm Pik3c2a Pip5k1c Pob1 Rab5a Rab5b Rab5c Reps1 Reps2 Rip Rps27a Ruk Salf Sblf Scarb2 Sdgf Seta Sh3d1B Sh3d2a Sh3d2b Sh3d2c Sh3d2c2 Sh3gl1 Sh3gl2 Sh3gl3 Sh3kbp1 Sh3p9 Sid329 Slc18a3 Slc2a8 Snag1 Snap91 Snx18 Snx9 Stam Stam1 Stam2 Stn1 Stn2 Stnb Ston1 Ston2 Syb2 Syb3 Synj1 Synj2 Syt1 Syt11 Syt2 Syt5 Syt8 Syt9 T3d Tac1r Tacr1 Tf Tfrc Tgfa Tgoln1 Toca1 Trf Trfr Trip10 Ttgn1 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 V2r Vacht Vamp2 Vamp3 Vamp4 Vamp8 Wnt-5a Wnt5a nnyRab5a
MET receptor recycling	ADP-ribosylation factor 6 ADP-ribosylation factor-binding protein GGA3 Adapter molecule crk Crk-like protein GRB2-associated-binding protein 1 Hepatocyte growth factor receptor Hepatocyte growth factor Ras-related protein Rab-4A Ras-related protein Rab-4B	P16056 P47941 P56371 P62331 Q08048 Q64010 Q8BMI3 Q91ZR1 Q9QYY0	Arf6 Crk Crkl Crko Crkol Gab1 Gga3 Hgf Kiaa0154 Met Rab4 Rab4a Rab4b
TBC/RABGAPs	ADP-ribosylation factor 6 Carabin Gamma-aminobutyric acid receptor-associated protein-like 2 Gamma-aminobutyric acid receptor-associated protein Hamartin Microtubule-associated proteins 1A/1B light chain 3B Optineurin Rab GTPase-activating protein 1 Ras-related protein Rab-11A Ras-related protein Rab-11B Ras-related protein Rab-33A Ras-related protein Rab-33B Ras-related protein Rab-35 Ras-related protein Rab-4A Ras-related protein Rab-6A Ras-related protein Rab-6B Ras-related protein Rab-7a Ras-related protein Rab-7b Ras-related protein Rab-8A Ras-related protein Rab-8B Serine/threonine-protein kinase ULK1 Synaptotagmin-like protein 1 TBC1 domain family member 10A TBC1 domain family member 10B TBC1 domain family member 13 TBC1 domain family member 14 TBC1 domain family member 15 TBC1 domain family member 17 TBC1 domain family member 24 TBC1 domain family member 25 TBC1 domain family member 2A TBC1 domain family member 7 TBC1 domain family, member 16 Tuberin	A1A5B6 A2ABG4 A2AWA9 B1AVH7 O35963 O70405 P35279 P46638 P51150 P55258 P56371 P58802 P60521 P61028 P61294 P62331 P62492 P97950 Q3UUG6 Q61037 Q6PHN9 Q8BHL3 Q8BYH7 Q8C9V1 Q8CGA2 Q8K3K8 Q8R3D1 Q8VEA8 Q99N80 Q9CQV6 Q9CXF4 Q9D0K0 Q9DCD6 Q9EP53	Arf6 D5Ertd110e D9Bwg0185e Epi64 Gabarap Gabarapl2 Kiaa0243 Kiaa1171 Kiaa1322 Kiaa4104 Map1alc3 Map1lc3 Map1lc3b Mel Optn Rab11 Rab11a Rab11b Rab33a Rab33b Rab35 Rab4 Rab4a Rab6 Rab6a Rab6b Rab7 Rab7a Rab7b Rab8 Rab8a Rab8b Rabgap1 Rabs10 Slp1 Sytl1 Tbc1d10 Tbc1d10a Tbc1d10b Tbc1d10c Tbc1d13 Tbc1d14 Tbc1d15 Tbc1d16 Tbc1d17 Tbc1d2 Tbc1d24 Tbc1d25 Tbc1d2a Tbc1d7 Tsc1 Tsc2 Ulk1
Retrograde transport at the Trans-Golgi-Network	ADP-ribosylation factor-like protein 1 ADP-ribosylation factor-related protein 1 Alpha-soluble NSF attachment protein Arfaptin-2 Beta-soluble NSF attachment protein Cation-dependent mannose-6-phosphate receptor Cation-independent mannose-6-phosphate receptor Conserved oligomeric Golgi complex subunit 1 Conserved oligomeric Golgi complex subunit 2 Conserved oligomeric Golgi complex subunit 3 Conserved oligomeric Golgi complex subunit 4 Conserved oligomeric Golgi complex subunit 5 Conserved oligomeric Golgi complex subunit 6 Conserved oligomeric Golgi complex subunit 7 Conserved oligomeric Golgi complex subunit 8 GRIP and coiled-coil domain-containing protein 1 GRIP and coiled-coil domain-containing protein 2 Gamma-soluble NSF attachment protein Golgin subfamily A member 1 Golgin subfamily A member 4 Guanine nucleotide exchange factor subunit RIC1 Perilipin-3 Protein SYS1 homolog RAB6A-GEF complex partner protein 2 Rab9 effector protein with kelch motifs Ras-related protein Rab-43 Ras-related protein Rab-6A Ras-related protein Rab-6B Ras-related protein Rab-9A Ras-related protein Rab-9B Rho-related BTB domain-containing protein 3 Short coiled-coil protein Syntaxin-16 Syntaxin-6 TATA element modulatory factor Trans-Golgi network integral membrane protein 1 USP6 N-terminal-like protein Vacuolar protein sorting-associated protein 51 homolog Vacuolar protein sorting-associated protein 52 homolog Vacuolar protein sorting-associated protein 53 homolog Vacuolar protein sorting-associated protein 54 Vesicle transport through interaction with t-SNAREs homolog 1A Vesicle-associated membrane protein 3 Vesicle-associated membrane protein 4 Vesicle-fusing ATPase	B9EKI3 O70480 O89116 P24668 P28663 P35279 P46460 P61211 P61294 P63024 Q07113 Q3UM29 Q3UVL4 Q5SPW0 Q62313 Q69ZJ7 Q78S06 Q78YZ6 Q80XC3 Q8BHH2 Q8BHT7 Q8BVI5 Q8BXL7 Q8C0L8 Q8C754 Q8CCB4 Q8CG50 Q8CHG3 Q8CI04 Q8K221 Q8R1U1 Q8R3I3 Q8VCH5 Q91VW5 Q921L5 Q9CTN4 Q9CW79 Q9CWZ7 Q9D4H2 Q9DB05 Q9DBG5 Q9JJA2 Q9JKK1 Q9R0M6 Q9Z160	46mpr Ara160 Arfip2 Arfrp1 Arl1 Cog1 Cog2 Cog3 Cog4 Cog5 Cog6 Cog7 Cog8 D9Bwg0185e Ffr Gcc1 Gcc2 Gm153 Golga1 Golga4 Igf2r Kiaa0019 Kiaa0258 Kiaa0336 Kiaa0878 Kiaa1134 Kiaa1432 Ldlb Ldlc M6pr M6prbp1 Napa Napb Napg Nsf Plin3 Rab43 Rab6 Rab6a Rab6b Rab9 Rab9a Rab9b Rabepk Rgp1 Rhobtb3 Ric1 Scoc Scoco Sid99 Skd2 Snapa Snapb Snapg Stx16 Stx6 Syb3 Sys1 Tgoln1 Tip47 Tmf1 Ttgn1 Usp6nl Vamp3 Vamp4 Vps51 Vps52 Vps53 Vps54 Vti1 Vti1a Vti1l2
RHOQ GTPase cycle	ADP-ribosylation factor-like protein 13B ARF GTPase-activating protein GIT1 ARF GTPase-activating protein GIT2 Caveolin-1 Cdc42 effector protein 1 Cdc42 effector protein 2 Cdc42 effector protein 3 Cdc42 effector protein 4 Cdc42-interacting protein 4 Cell division control protein 42 homolog Copine-8 Cystic fibrosis transmembrane conductance regulator DEP domain-containing protein 1B Formin-binding protein 1 Gap junction alpha-1 protein Glucose-fructose oxidoreductase domain-containing protein 1 Golgi-associated PDZ and coiled-coil motif-containing protein IQ motif containing GTPase activating protein 3 Intersectin-1 Junction plakoglobin MAGUK p55 subfamily member 7 Metalloreductase STEAP3 NEDD4-like E3 ubiquitin-protein ligase WWP2 Neutral amino acid transporter B(0) Obscurin Oligophrenin-1 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein Pleckstrin homology domain-containing family G member 3 Protein diaphanous homolog 3 Protein scribble homolog Ragulator complex protein LAMTOR1 Ras GTPase-activating-like protein IQGAP1 Ras-related protein Rab-7a Rho GTPase-activating protein 17 Rho GTPase-activating protein 1 Rho GTPase-activating protein 21 Rho GTPase-activating protein 26 Rho GTPase-activating protein 32 Rho GTPase-activating protein 33 Rho GTPase-activating protein 35 Rho GTPase-activating protein 5 Rho GTPase-activating protein 7 Rho GTPase-activating protein SYDE1 Rho guanine nucleotide exchange factor 7 Rho guanine nucleotide exchange factor 9 Rho-related GTP-binding protein RhoQ SLIT-ROBO Rho GTPase-activating protein 2 Serine/threonine-protein kinase MRCK alpha Serine/threonine-protein kinase MRCK beta Serine/threonine-protein kinase PAK 1 Serine/threonine-protein kinase PAK 2 Serine/threonine-protein kinase PAK 4 Sodium bicarbonate cotransporter 3 Stomatin Synaptosomal-associated protein 23 Transferrin receptor protein 1 Vang-like protein 1 Vesicle-associated membrane protein 3	A2AAJ9 F8VQ29 O09044 O88643 P23242 P26361 P49817 P51150 P51912 P54116 P60766 P63024 P97393 Q02257 Q3UHD2 Q3UIA2 Q3UTH8 Q3UU96 Q4VAC9 Q5FWK3 Q62351 Q640N2 Q68FF6 Q69ZK0 Q6DFV3 Q6ZQ82 Q7TT50 Q80TY0 Q80U72 Q80YF9 Q80Z96 Q811P8 Q8BH60 Q8BH88 Q8BTW9 Q8BTY2 Q8BVD5 Q8CI59 Q8CIN4 Q8CJ53 Q8JZX9 Q8R527 Q91W92 Q91YM2 Q91Z67 Q99J31 Q9CQ22 Q9CQC5 Q9DBH0 Q9DBZ9 Q9DC53 Q9ES28 Q9JKF1 Q9JLQ2 Q9JM96 Q9R0Z9 Q9Z0R4 Q9Z207	Aaat Abcc7 Arhgap1 Arhgap10 Arhgap17 Arhgap21 Arhgap26 Arhgap32 Arhgap33 Arhgap35 Arhgap5 Arhgap7 Arhgef7 Arhgef9 Arhq Arl13b Arl2l1 Asct2 Borg1 Borg2 Borg4 Borg5 Cal Cav Cav1 Cdc42 Cdc42bpa Cdc42bpb Cdc42ep1 Cdc42ep2 Cdc42ep3 Cdc42ep4 Cep1 Cep2 Cep3 Cep4 Cftr Cip4 Cpne8 Cxn-43 Depdc1b Diap3 Diaph3 Dlc1 Epb7.2 Epb72 Ese1 Fbp17 Fbp27 Fnbp1 Fnbp2 Gfod1 Git1 Git2 Gja1 Gm878 Gopc Grit Grlf1 Iqgap1 Iqgap3 Itsn Itsn1 Jup Kiaa0142 Kiaa0147 Kiaa0424 Kiaa0451 Kiaa0554 Kiaa0599 Kiaa0621 Kiaa0712 Kiaa1124 Kiaa1142 Kiaa1415 Kiaa1424 Kiaa1722 Lamtor1 Lap4 Lpp2 Mpp7 Nbc3 Obscn Ophn1 P190A Pak1 Pak2 Pak3bp Pak4 Paka Plekhg3 Prex1 Rab7 Rab7a Rhogap5 Rhoq Rics Scrib Scrib1 Slc1a5 Slc1a7 Slc4a7 Snap23 Sndt Snx26 Srgap2 Stard12 Steap3 Stom Syb3 Syde1 Tc10 Tcgap Tfrc Trfr Trip10 Tsap6 Vamp3 Vangl1 Wwp2 p190ARHOGAP
Aggrephagy	ADP-ribosylation factor-like protein 13B Centrin-1 Cystic fibrosis transmembrane conductance regulator Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic dynein 1 light intermediate chain 1 Cytoplasmic dynein 1 light intermediate chain 2 Dynein light chain 1, cytoplasmic Dynein light chain 2, cytoplasmic E3 ubiquitin-protein ligase parkin Histone deacetylase 6 Intraflagellar transport protein 88 homolog Parkinson disease protein 7 homolog Pericentrin Polyubiquitin-B Polyubiquitin-C Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O88485 O88487 P0CG49 P0CG50 P26361 P41209 P48725 P61089 P62983 P62984 P63168 Q61371 Q640N2 Q6PDL0 Q8R1Q8 Q99LX0 Q9CZY3 Q9D0M5 Q9JHU4 Q9WVS6 Q9Z2V5	Abcc7 Arl13b Arl2l1 Blu Calt Cetn1 Cftr Croc1 Dhc1 Dlc1 Dlc2 Dnch1 Dnchc1 Dnci1 Dnci2 Dncic1 Dncic2 Dncl1 Dnclc1 Dncli1 Dncli2 Dnclic1 Dnclic2 Dyhc Dync1h1 Dync1i1 Dync1i2 Dync1li1 Dync1li2 Dynll1 Dynll2 Hdac6 Ift88 Park2 Park7 Pcnt Pcnt2 Prkn Rps27a Tg737 Tg737Rpw TgN737Rpw Ttc10 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ube2n Ube2v1
ARL13B-mediated ciliary trafficking of INPP5E	ADP-ribosylation factor-like protein 13B Phosphatidylinositol polyphosphate 5-phosphatase type IV Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta	O55057 Q640N2 Q9JII1	Arl13b Arl2l1 Inpp5e Pde6d
RAS processing	ADP-ribosylation factor-like protein 2 Acyl-protein thioesterase 1 Alpha/beta hydrolase domain-containing protein 17A Alpha/beta hydrolase domain-containing protein 17B Alpha/beta hydrolase domain-containing protein 17C Bcl-2-like protein 1 CAAX prenyl protease 2 Calmodulin-1 GTPase HRas GTPase KRas GTPase NRas Golgin subfamily A member 7 Palmitoyltransferase ZDHHC9 Protein farnesyltransferase subunit beta Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Protein kinase C theta type Protein-S-isoprenylcysteine O-methyltransferase Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta Ubiquitin carboxyl-terminal hydrolase 17-like protein A Ubiquitin carboxyl-terminal hydrolase 17-like protein B Ubiquitin carboxyl-terminal hydrolase 17-like protein C Ubiquitin carboxyl-terminal hydrolase 17-like protein D Ubiquitin carboxyl-terminal hydrolase 17-like protein E cGMP-dependent protein kinase 2	E9Q9U0 G5E8G2 G5E8I7 O55057 P08556 P0DP26 P32883 P57791 P59268 P97823 Q02111 Q61068 Q61239 Q61410 Q61411 Q64373 Q7M759 Q7M764 Q8K2I1 Q8VCV1 Q91W53 Q99JW1 Q9D0J4 Q9EQK7	Abhd17a Abhd17b Abhd17c Apt1 Arl2 Bcl2l Bcl2l1 Bclx Calm Calm1 Cam Cam1 D10Bwg1364e DUB-2 Dub-1 Dub1 Dub1a Dub2 Dub2a Dub3 Dub6 Face2 Fnta Fntb Golga7 Hras Hras1 Icmt Kras Kras2 Lypla1 Nras Pde6d Pkcq Pla1a Prkcq Prkg2 Prkgr2 Rce1 Rce1a Usp17 Usp17l2 Usp17l5 Usp17la Usp17lb Usp17lc Usp17ld Usp17le Zdhhc9
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane	ADP-ribosylation factor-like protein 2-binding protein ADP-ribosylation factor-like protein 2 ADP/ATP translocase 1 ADP/ATP translocase 2 Equilibrative nucleoside transporter 1 Equilibrative nucleoside transporter 2 Equilibrative nucleoside transporter 3 Equilibrative nucleoside transporter 4 Sodium/nucleoside cotransporter 1 Sodium/nucleoside cotransporter 2 Solute carrier family 28 member 3	E9PXX9 O88627 P48962 P51881 Q61672 Q8R139 Q99P65 Q9D0J4 Q9D385 Q9ERH8 Q9JIM1	Aac1 Aac2 Anc1 Ant1 Ant2 Arl2 Arl2bp Bart Bart1 Cnt2 Cnt3 Der12 Ent1 Ent2 Ent3 Ent4 Hnp36 Slc25a4 Slc25a5 Slc28a1 Slc28a2 Slc28a3 Slc29a1 Slc29a2 Slc29a3 Slc29a4 pmat
BBSome-mediated cargo-targeting to cilium	ADP-ribosylation factor-like protein 6 Bardet-Biedl syndrome 1 protein homolog Bardet-Biedl syndrome 2 protein homolog Bardet-Biedl syndrome 4 protein homolog Bardet-Biedl syndrome 5 protein homolog Bardet-Biedl syndrome 7 protein homolog Leucine zipper transcription factor-like protein 1 Melanin-concentrating hormone receptor 1 Protein PTHB1 Protein smoothened Rab-3A-interacting protein Somatostatin receptor type 3 Tetratricopeptide repeat protein 8	O88848 P30935 P56726 Q3V3N7 Q68EF0 Q811G0 Q8C1Z7 Q8JZL2 Q8K2G4 Q8VD72 Q9CWF6 Q9CZQ9 Q9JHQ5	Arl6 Bbs1 Bbs2 Bbs2l1 Bbs3 Bbs4 Bbs5 Bbs7 Bbs8 Bbs9 Gpr24 Lztfl1 Mchr1 Pthb1 Rab3ip Rabin8 Slc1 Smo Smoh Smstr3 Sstr3 Ttc8
POLB-Dependent Long Patch Base Excision Repair	ADP-ribosylhydrolase ARH3 DNA ligase 1 DNA polymerase beta DNA repair nuclease/redox regulator APEX1 Flap endonuclease 1 Poly [ADP-ribose] polymerase 1 Poly [ADP-ribose] polymerase 2 Poly(ADP-ribose) glycohydrolase	O88554 O88622 P11103 P28352 P37913 P39749 Q8CG72 Q8K409	Adprhl2 Adprp Adprs Adprt Adprt1 Adprt2 Adprtl2 Ape Apex Apex1 Arh3 Aspartl2 Fen-1 Fen1 Lig-1 Lig1 Parg Parp1 Parp2 Polb Ref1
RNA Polymerase II Pre-transcription Events	AF4/FMR2 family member 4 Btk-PH-domain binding protein CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIE subunit 1 General transcription factor IIE subunit 2 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Parafibromin Protein AF-9 Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 Superkiller complex protein 8 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor TATA-box binding protein associated factor 4 TATA-box-binding protein Transcription elongation factor A protein 1 Transcription elongation factor SPT4-A Transcription elongation factor SPT5 Transcription elongation factor SPT6 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 3 Transcription initiation factor TFIID subunit 4B Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9 Transcription initiation factor TFIID subunit 9B Uncharacterized protein	A2AM29 E9QAP7 G5E8Z2 O08740 O08811 O08856 O55201 O70422 O88874 P08775 P10711 P19426 P29037 P49135 P51949 P60898 P61216 P61219 P62488 P62869 P62876 P62915 P63271 P83940 P97760 Q03147 Q08943 Q3THK3 Q3UYV9 Q3V063 Q5HZG4 Q5XJE5 Q61458 Q62018 Q62311 Q62383 Q63871 Q6NZA9 Q7TQK0 Q7TSG2 Q80UV9 Q80UW8 Q80ZM7 Q8BG30 Q8BQ46 Q8C092 Q8C176 Q8C1D8 Q8C4Y3 Q8CB77 Q8CFI7 Q8JZM7 Q8K0H5 Q8K2T8 Q8K2X8 Q8R0A0 Q8VD76 Q8VE65 Q8VI33 Q91ZD6 Q920B9 Q922L6 Q923G2 Q99J95 Q99JX1 Q99PM3 Q9CQ49 Q9D0D5 Q9D4C5 Q9D7M8 Q9D902 Q9DBA9 Q9ERF3 Q9ERL0 Q9ESC8 Q9JIB4 Q9QWV9 Q9R1C0	Af9 Aff4 Alf4 Btf2p44 Cak Cbp20 Cbp80 Ccg1 Ccnh Ccnk Ccnt1 Ccnt2 Cdc73 Cdk7 Cdk9 Cdkn7 Cobra1 Crk4 Ctdp1 Ctr9 D17Wsu155e D17h6s45 Eaf1 Eaf2 Ell Eloa Elob Eloc Ercc2 Ercc3 Fact140 Factp140 Fcp1 Festa Gm185 Gtf2a1 Gtf2a2 Gtf2b Gtf2e1 Gtf2e2 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Iws1 Iws1l Kiaa0155 Kiaa0162 Leo1 Mat1 Mllt1 Mllt3 Mnat1 Mo15 Mpk-7 Mt1a Ncbp1 Ncbp2 Nelfa Nelfb Nelfcd Nelfd Nelfe Paf1 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Sh2bp1 Skic8 Spt4h Ssrp1 Supt16 Supt16h Supt4a Supt4h Supt4h1a Supt5 Supt5h Supt6 Supt6h Taf1 Taf10 Taf11 Taf12 Taf13 Taf15 Taf2 Taf2c2 Taf2e Taf2f Taf2g Taf2h Taf2k Taf3 Taf4 Taf4a Taf4b Taf5 Taf6 Taf7 Taf7l2 Taf9 Taf9b Taf9l Tafii105 Tafii30 Tbp Tcea1 Tceat Tceb1 Tceb2 Tceb3 Tfiid Th1 Th1l Traits Wdr61 Whsc2 Whsc2h Xpb Xpbc Xpd
Formation of RNA Pol II elongation complex	AF4/FMR2 family member 4 Btk-PH-domain binding protein CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Parafibromin Protein AF-9 Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 Superkiller complex protein 8 Transcription elongation factor A protein 1 Transcription elongation factor SPT4-A Transcription elongation factor SPT5 Transcription elongation factor SPT6	A2AM29 O08740 O08811 O08856 O55201 O70422 O88874 P08775 P10711 P19426 P49135 P51949 P60898 P61219 P62488 P62869 P62876 P63271 P83940 P97760 Q03147 Q08943 Q3THK3 Q3UYV9 Q5XJE5 Q61458 Q62018 Q62383 Q63871 Q7TQK0 Q7TSG2 Q80UW8 Q8BG30 Q8C1D8 Q8C4Y3 Q8CB77 Q8CFI7 Q8JZM7 Q8K2T8 Q8K2X8 Q8R0A0 Q8VD76 Q91ZD6 Q920B9 Q922L6 Q923G2 Q99J95 Q9CQ49 Q9D4C5 Q9D7M8 Q9DBA9 Q9ERF3 Q9ERL0 Q9ESC8 Q9JIB4 Q9QWV9	Af9 Aff4 Alf4 Btf2p44 Cak Cbp20 Cbp80 Ccnh Ccnk Ccnt1 Ccnt2 Cdc73 Cdk7 Cdk9 Cdkn7 Cobra1 Crk4 Ctdp1 Ctr9 D17Wsu155e D17h6s45 Eaf1 Eaf2 Ell Eloa Elob Eloc Ercc2 Ercc3 Fact140 Factp140 Fcp1 Festa Gm185 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Iws1 Iws1l Kiaa0155 Kiaa0162 Leo1 Mat1 Mllt1 Mllt3 Mnat1 Mo15 Mpk-7 Mt1a Ncbp1 Ncbp2 Nelfa Nelfb Nelfcd Nelfd Nelfe Paf1 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Sh2bp1 Skic8 Spt4h Ssrp1 Supt16 Supt16h Supt4a Supt4h Supt4h1a Supt5 Supt5h Supt6 Supt6h Tcea1 Tceat Tceb1 Tceb2 Tceb3 Th1 Th1l Traits Wdr61 Whsc2 Whsc2h Xpb Xpbc Xpd
RNA Polymerase II Transcription Elongation	AF4/FMR2 family member 4 Btk-PH-domain binding protein CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Parafibromin Protein AF-9 Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 Superkiller complex protein 8 Transcription elongation factor A protein 1 Transcription elongation factor SPT4-A Transcription elongation factor SPT5 Transcription elongation factor SPT6	A2AM29 O08740 O08811 O08856 O55201 O70422 O88874 P08775 P10711 P19426 P49135 P51949 P60898 P61219 P62488 P62869 P62876 P63271 P83940 P97760 Q03147 Q08943 Q3THK3 Q5XJE5 Q61458 Q62018 Q62383 Q63871 Q7TQK0 Q7TSG2 Q80UW8 Q8BG30 Q8C1D8 Q8C4Y3 Q8CB77 Q8CFI7 Q8JZM7 Q8K2T8 Q8K2X8 Q8R0A0 Q8VD76 Q91ZD6 Q920B9 Q922L6 Q923G2 Q99J95 Q9D4C5 Q9D7M8 Q9DBA9 Q9ERF3 Q9ERL0 Q9ESC8 Q9JIB4 Q9QWV9	Af9 Aff4 Alf4 Btf2p44 Cak Ccnh Ccnk Ccnt1 Ccnt2 Cdc73 Cdk7 Cdk9 Cdkn7 Cobra1 Crk4 Ctdp1 Ctr9 D17Wsu155e D17h6s45 Eaf1 Eaf2 Ell Eloa Elob Eloc Ercc2 Ercc3 Fact140 Factp140 Fcp1 Festa Gm185 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Iws1 Iws1l Kiaa0155 Kiaa0162 Leo1 Mat1 Mllt1 Mllt3 Mnat1 Mo15 Mpk-7 Mt1a Nelfa Nelfb Nelfcd Nelfd Nelfe Paf1 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Sh2bp1 Skic8 Spt4h Ssrp1 Supt16 Supt16h Supt4a Supt4h Supt4h1a Supt5 Supt5h Supt6 Supt6h Tcea1 Tceat Tceb1 Tceb2 Tceb3 Th1 Th1l Traits Wdr61 Whsc2 Whsc2h Xpb Xpbc Xpd
Aryl hydrocarbon receptor signalling	AH receptor-interacting protein Aryl hydrocarbon receptor nuclear translocator 2 Aryl hydrocarbon receptor nuclear translocator Aryl hydrocarbon receptor repressor Aryl hydrocarbon receptor Heat shock protein HSP 90-beta Prostaglandin E synthase 3	O08915 P11499 P30561 P53762 Q3U1U7 Q61324 Q9R0Q7	Ahr Ahrr Aip Arnt Arnt2 Hsp84 Hsp84-1 Hsp90ab1 Hspc3 Hspcb Kiaa0307 Kiaa1234 Ptges3 Sid3177 Tebp
Signaling by LTK	ALK and LTK ligand 1 ALK and LTK ligand 2 Activated CDC42 kinase 1 Insulin receptor substrate 1 Leukocyte tyrosine kinase receptor Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Son of sevenless homolog 1	J3QPP8 O08908 O54967 P08923 P26450 P35569 P42337 Q62245 Q80UG6 Q8BTI9	Ack1 Alkal1 Alkal2 Fam150a Fam150b Irs-1 Irs1 Ltk Pik3ca Pik3cb Pik3r1 Pik3r2 Sos1 Tnk2
MDK and PTN in ALK signaling	ALK tyrosine kinase receptor Midkine Pleiotrophin Receptor-type tyrosine-protein phosphatase zeta	B9EKR1 P12025 P63089 P97793	Alk Mdk Mk Ptn Ptprz1
Purine salvage	AMP deaminase 1 AMP deaminase 2 AMP deaminase 3 Adenine phosphoribosyltransferase Adenosine deaminase-like protein Adenosine deaminase Adenosine kinase Deoxycytidine kinase Deoxyguanosine kinase, mitochondrial GMP reductase 1 GMP reductase 2 Hypoxanthine-guanine phosphoribosyltransferase Purine nucleoside phosphorylase Purine nucleoside phosphorylase	O08739 P00493 P03958 P08030 P23492 P43346 P55264 Q3V1D3 Q80SY6 Q99L27 Q9D8C9 Q9DBT5 Q9DCZ1 Q9QX60	Ada Adal Adk Ampd1 Ampd2 Ampd3 Aprt Dck Dgk Dguok Gmpr Gmpr1 Gmpr2 Hprt Hprt1 Np Pnp Pnp1 Pnp2
Cargo recognition for clathrin-mediated endocytosis	AP-2 complex subunit alpha-1 AP-2 complex subunit alpha-2 AP-2 complex subunit beta AP-2 complex subunit mu AP-2 complex subunit sigma AP2-associated protein kinase 1 Adaptin ear-binding coat-associated protein 1 Adaptin ear-binding coat-associated protein 2 Amphiregulin Apolipoprotein B-100 Beta-2 adrenergic receptor Beta-adrenergic receptor kinase 1 Beta-arrestin-1 Beta-arrestin-2 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 3 COP9 signalosome complex subunit 4 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 7a COP9 signalosome complex subunit 7b COP9 signalosome complex subunit 8 Cation-dependent mannose-6-phosphate receptor Cation-independent mannose-6-phosphate receptor Clathrin coat assembly protein AP180 Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Cystic fibrosis transmembrane conductance regulator Disabled homolog 2 Dyslexia-associated protein KIAA0319 homolog E3 ubiquitin-protein ligase CBL Endophilin-A1 Endophilin-A2 Endophilin-A3 Epidermal growth factor receptor substrate 15-like 1 Epidermal growth factor receptor substrate 15 Epidermal growth factor receptor Epigen Epsin-1 Epsin-2 F-BAR domain only protein 1 F-BAR domain only protein 2 Frizzled-4 G protein-coupled receptor kinase 3 Hepatocyte growth factor-regulated tyrosine kinase substrate Interleukin-7 receptor subunit alpha Intersectin-1 Intersectin-2 Low density lipoprotein receptor adapter protein 1 Low-density lipoprotein receptor-related protein 2 Low-density lipoprotein receptor Lysosome membrane protein 2 Muscarinic acetylcholine receptor M2 NEDD8 Phosphatidylinositol-binding clathrin assembly protein Polyubiquitin-B Polyubiquitin-C Pro-epidermal growth factor Probetacellulin Proepiregulin Proheparin-binding EGF-like growth factor Protein Wnt-5a Protransforming growth factor alpha RalBP1-associated Eps domain-containing protein 1 RalBP1-associated Eps domain-containing protein 2 SH3 domain-containing kinase-binding protein 1 Segment polarity protein dishevelled homolog DVL-2 Serotransferrin Signal transducing adapter molecule 1 Signal transducing adapter molecule 2 Solute carrier family 2, facilitated glucose transporter member 8 Stonin-1 Stonin-2 Substance-P receptor Synaptotagmin-11 Synaptotagmin-1 Synaptotagmin-2 Synaptotagmin-8 Synaptotagmin-9 T-cell surface glycoprotein CD3 delta chain T-cell surface glycoprotein CD3 gamma chain T-cell surface glycoprotein CD4 Torsin-1A Torsin-1B Trans-Golgi network integral membrane protein 1 Transferrin receptor protein 1 Type-1 angiotensin II receptor A Ubiquilin-1 Ubiquilin-2 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Vasopressin V2 receptor Vasopressin-neurophysin 2-copeptin Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 3 Vesicle-associated membrane protein 4 Vesicle-associated membrane protein 8 Vesicular acetylcholine transporter	A2ARV4 E9Q414 O08585 O35114 O35304 O35864 O54916 O70404 O70480 O88543 O88544 O88545 O88721 O88811 P01132 P04235 P06332 P0CG49 P0CG50 P11942 P16872 P17426 P17427 P18762 P22682 P22725 P24668 P26361 P29595 P29754 P30548 P31955 P35455 P35951 P42567 P46096 P46097 P48030 P61202 P62743 P62983 P62984 P63024 P63044 P70297 P84091 P98078 Q01279 Q05928 Q06186 Q07113 Q3UHJ0 Q3UQN2 Q3UYH7 Q5SZV5 Q60838 Q60902 Q61088 Q61521 Q61548 Q62313 Q62351 Q62419 Q62420 Q62421 Q68FD5 Q6IRU5 Q7M6Y3 Q80VP1 Q80XA6 Q8BV13 Q8BWG8 Q8BZ60 Q8C142 Q8CDJ8 Q8CHU3 Q8K285 Q8R317 Q8R550 Q8VBV7 Q91YI4 Q921I1 Q924X1 Q99LD4 Q99LI8 Q99MK8 Q9CR95 Q9CZ04 Q9D1J1 Q9DBG3 Q9ER39 Q9ER41 Q9ERZ4 Q9JIF3 Q9QZM0 Q9R0N3 Q9R0N6 Q9R0N9 Q9Z0R4 Q9Z0R6	46mpr Aak1 Abcc7 Adrb2 Adrb2r Adrbk1 Adrbk2 Adtaa Adtab Agtr1 Agtr1a Ap17 Ap2a1 Ap2a2 Ap2b1 Ap2m1 Ap2s1 Apob Areg Arh Arrb1 Arrb2 Avp Avpr2 Bcn Btc Calm Cbl Cd3d Cd3g Cd4 Cftr Chrm-2 Chrm2 Clapa1 Clapb1 Clapm1 Claps2 Clta Cltb Cltc Cops1 Cops2 Cops3 Cops4 Cops5 Cops6 Cops7a Cops7b Cops8 Csn1 Csn2 Csn3 Csn4 Csn5 Csn6 Csn7a Csn7b Csn8 Dab2 Doc2 Dtr Dvl2 Dyt1 Een1 Egf Egfr Epgn Epn1 Epn2 Eps15 Eps15-rs Eps15R Eps15l1 Ereg Ese1 Ese2 Fcho1 Fcho2 Fit1 Fzd4 Glut8 GlutX1 Gps1 Grk2 Grk3 Hbegf Hbp Hegfl Hgs Hrs Igf2r Il7r Itsn Itsn1 Itsn2 Jab1 Kiaa0319 Kiaa1048 Kic2 Ldlr Ldlrap1 Lrp2 M6pr Necap1 Necap2 Nedd-8 Nedd8 Picalm Plic1 Plic2 Pob1 Reps1 Reps2 Rps27a Ruk Salf Sblf Scarb2 Sdgf Seta Sh3d1B Sh3d2a Sh3d2b Sh3d2c Sh3d2c2 Sh3gl1 Sh3gl2 Sh3gl3 Sh3kbp1 Slc18a3 Slc2a8 Snap91 Stam Stam1 Stam2 Stn1 Stn2 Stnb Ston1 Ston2 Syb2 Syb3 Syt1 Syt11 Syt2 Syt5 Syt8 Syt9 T3d Tac1r Tacr1 Tf Tfrc Tgfa Tgoln1 Tor1a Tor1b Trf Trfr Trip15 Ttgn1 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ubqln1 Ubqln2 V2r Vacht Vamp2 Vamp3 Vamp4 Vamp8 Wnt-5a Wnt5a

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