GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **376 - 400** of **2074** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism
Amyloid fiber formation	ADP-ribosylation factor-binding protein GGA1 ADP-ribosylation factor-binding protein GGA2 ADP-ribosylation factor-binding protein GGA3 Alpha-synuclein Amyloid-beta precursor protein Apolipoprotein A-I Apolipoprotein A-IV Apolipoprotein E Basement membrane-specific heparan sulfate proteoglycan core protein Beta-2-microglobulin Beta-secretase 1 Calbindin Calcitonin Cystatin-C Disintegrin and metalloproteinase domain-containing protein 10 E3 ubiquitin-protein ligase SIAH1 E3 ubiquitin-protein ligase SIAH2 E3 ubiquitin-protein ligase parkin Fibrinogen alpha chain Furin Gamma-secretase subunit APH-1A Gamma-secretase subunit APH-1B Gamma-secretase subunit PEN-2 Gelsolin Histone H2A type 1-B/E Histone H2A type 1-C Histone H2A type 1-D Histone H2A type 1-J Histone H2A type 2-A Histone H2A type 2-C Histone H2A-Bbd type 1 Histone H2A.Z Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/F/G/I Histone H2B type 1-D Histone H2B type 1-H Histone H2B type 1-J Histone H2B type 1-K Histone H2B type 1-L Histone H2B type 1-M Histone H2B type 1-N Histone H2B type 1-O Histone H2B type 2-E Histone H2B type 3-B Histone H2B type F-S Histone H3.1 Histone H3.2 Histone H3.3 Histone H4 Insulin Integral membrane protein 2B Islet amyloid polypeptide Lactadherin Lactotransferrin Lysozyme C N-acetyltransferase 8 Natriuretic peptides A Nicastrin Odontogenic ameloblast-associated protein Polyubiquitin-B Polyubiquitin-C Prolactin Putative N-acetyltransferase 8B Semenogelin-1 Serum amyloid A-1 protein Serum amyloid P-component Sortilin-related receptor Synphilin-1 Tetraspanin-14 Tetraspanin-15 Tetraspanin-33 Tetraspanin-5 Transforming growth factor-beta-induced protein ig-h3 Transthyretin Ubiquitin carboxyl-terminal hydrolase 9X Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Ubiquitin/ISG15-conjugating enzyme E2 L6	A1E959 O14672 O14933 O43255 O60260 O60814 O95858 P01034 P01160 P01236 P01258 P01308 P02647 P02649 P02671 P02743 P02766 P02788 P04279 P04908 P05067 P05937 P06396 P06727 P06899 P09958 P0C0S5 P0C5Y9 P0CG47 P0CG48 P0DJI8 P10997 P16104 P20671 P23527 P33778 P37840 P56817 P57053 P58876 P61626 P61769 P62079 P62805 P62807 P62979 P62987 P68431 P84243 P98160 Q08431 Q15582 Q16777 Q16778 Q6FI13 Q71DI3 Q86UF1 Q8IUQ4 Q8N257 Q8NG11 Q8WW43 Q92542 Q92673 Q93008 Q93077 Q93079 Q96A08 Q96BI3 Q99877 Q99878 Q99879 Q99880 Q9NZ42 Q9NZ52 Q9UHE5 Q9UHF3 Q9UJY4 Q9UJY5 Q9Y287 Q9Y6H5	A4 AD1 ADAM10 ANP APCS APH1A APH1B APIN APOA1 APOA4 APOE APP B2M BACE BACE1 BIGH3 BRI BRI2 C11orf32 CAB27 CALB1 CALC1 CALCA CML1 CML2 CST3 DFFRX FAM FGA FUR FURIN GGA1 GGA2 GGA3 GIG12 GLA GSN H2AB1 H2AC14 H2AC18 H2AC19 H2AC20 H2AC4 H2AC6 H2AC7 H2AC8 H2AFA H2AFB1 H2AFE H2AFG H2AFL H2AFM H2AFO H2AFQ H2AFX H2AFZ H2AX H2AZ H2AZ1 H2BC1 H2BC10 H2BC11 H2BC12 H2BC12L H2BC13 H2BC14 H2BC15 H2BC17 H2BC21 H2BC26 H2BC3 H2BC4 H2BC5 H2BC6 H2BC7 H2BC8 H2BC9 H2BFA H2BFB H2BFC H2BFD H2BFE H2BFF H2BFG H2BFH H2BFJ H2BFK H2BFL H2BFN H2BFQ H2BFR H2BFS H2BFT H2BS1 H2BU1 H3-3A H3-3B H3.3A H3.3B H3C1 H3C10 H3C11 H3C12 H3C13 H3C14 H3C15 H3C2 H3C3 H3C4 H3C6 H3C7 H3C8 H3F2 H3F3 H3F3A H3F3B H3FA H3FB H3FC HIST1H3C H3FD H3FF H3FH H3FI H3FJ H3FK H3FL H3FM H4-16 H4/A H4/B H4/C H4/D H4/E H4/G H4/H H4/I H4/J H4/K H4/M H4/N H4/O H4C1 H4C11 H4C12 H4C13 H4C14 H4C15 H4C16 H4C2 H4C3 H4C4 H4C5 H4C6 H4C8 H4C9 H4F2 H4FA H4FB H4FC H4FD H4FE H4FG H4FH H4FI H4FJ H4FK H4FM H4FN H4FO HIRIP1 HIRIP2 HIST1H2AB HIST1H2AC HIST1H2AD HIST1H2AE HIST1H2AJ HIST1H2BA HIST1H2BB HIST1H2BC HIST1H2BD HIST1H2BE HIST1H2BF HIST1H2BG HIST1H2BH HIST1H2BI HIST1H2BJ HIST1H2BK HIST1H2BL HIST1H2BM HIST1H2BN HIST1H2BO HIST1H3A HIST1H3B HIST1H3D HIST1H3E HIST1H3F HIST1H3G HIST1H3H HIST1H3I HIST1H3J HIST1H4A HIST1H4B HIST1H4C HIST1H4D HIST1H4E HIST1H4F HIST1H4H HIST1H4I HIST1H4J HIST1H4K HIST1H4L HIST2H2AA HIST2H2AA3 HIST2H2AA4 HIST2H2AC HIST2H2BE HIST2H3A HIST2H3C HIST2H3D HIST2H4 HIST2H4A HIST2H4B HIST3H2BB HIST4H4 HSPG2 HUMSIAH IAPP INS ITM2B KIAA0154 KIAA0253 KIAA1080 KIAA1149 KUZ LF LTF LYZ LZM MADM MFGE8 NACP NAT8 NAT8B NCSTN NET7 NPPA ODAM PACE PALB PARK1 PARK2 PCSK3 PEN PEN2 PND PRKN PRL PSENEN PSF PSFL PTX2 RPS27A SAA1 SEMG SEMG1 SIAH1 SIAH2 SNCA SNCAIP SORL1 TGFBI TM4SF14 TM4SF15 TM4SF9 TSC501 TSH2B TSPAN14 TSPAN15 TSPAN33 TSPAN5 TTR UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 UBCH8 UBE2L6 USP9 USP9X	Homo sapiens (human)
Retrograde transport at the Trans-Golgi-Network	ADP-ribosylation factor-like protein 1 ADP-ribosylation factor-related protein 1 Alpha-soluble NSF attachment protein Arfaptin-2 Beta-soluble NSF attachment protein Cation-dependent mannose-6-phosphate receptor Cation-independent mannose-6-phosphate receptor Conserved oligomeric Golgi complex subunit 1 Conserved oligomeric Golgi complex subunit 2 Conserved oligomeric Golgi complex subunit 3 Conserved oligomeric Golgi complex subunit 4 Conserved oligomeric Golgi complex subunit 5 Conserved oligomeric Golgi complex subunit 6 Conserved oligomeric Golgi complex subunit 7 Conserved oligomeric Golgi complex subunit 8 GRIP and coiled-coil domain-containing protein 1 GRIP and coiled-coil domain-containing protein 2 Gamma-soluble NSF attachment protein Golgin subfamily A member 1 Golgin subfamily A member 4 Guanine nucleotide exchange factor subunit RIC1 N-alpha-acetyltransferase 30 N-alpha-acetyltransferase 35, NatC auxiliary subunit N-alpha-acetyltransferase 38, NatC auxiliary subunit Perilipin-3 Protein SYS1 homolog RAB6A-GEF complex partner protein 2 Rab9 effector protein with kelch motifs Ras-related protein Rab-43 Ras-related protein Rab-6A Ras-related protein Rab-6B Ras-related protein Rab-9A Ras-related protein Rab-9B Rho-related BTB domain-containing protein 3 Short coiled-coil protein Syntaxin-10 Syntaxin-16 Syntaxin-6 TATA element modulatory factor Trans-Golgi network integral membrane protein 2 USP6 N-terminal-like protein Vacuolar protein sorting-associated protein 51 homolog Vacuolar protein sorting-associated protein 52 homolog Vacuolar protein sorting-associated protein 53 homolog Vacuolar protein sorting-associated protein 54 Vesicle transport through interaction with t-SNAREs homolog 1A Vesicle-associated membrane protein 3 Vesicle-associated membrane protein 4 Vesicle-fusing ATPase	O14662 O43493 O43752 O60499 O60664 O75379 O94955 P11717 P20340 P20645 P40616 P46459 P51151 P53365 P54920 P82094 P83436 Q13439 Q13795 Q14746 Q147X3 Q15836 Q4ADV7 Q5VIR6 Q5VZE5 Q7Z6M1 Q86YS6 Q8IWJ2 Q8N1B4 Q8N2H4 Q8WTW3 Q92546 Q92738 Q92805 Q96AJ9 Q96CN9 Q96JB2 Q96MW5 Q99747 Q9BRA0 Q9H115 Q9H9E3 Q9NP90 Q9NRW1 Q9P1Q0 Q9UID3 Q9UIL1 Q9UP83 Q9Y2V7	ANG2 ARA160 ARFIP2 ARFRP1 ARL1 ARP1 C11orf2 C11orf3 C14orf35 C20orf169 CIP150 COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 EGAP FFR GCC1 GCC2 GOLGA1 GOLGA4 GOLTC1 GTC90 HCC8 IGF2R KIAA0019 KIAA0258 KIAA0336 KIAA0878 KIAA1134 KIAA1381 KIAA1432 LDLB LDLC LSMD1 M6PR M6PRBP1 MAK10 MAK3 MAK31 MPR46 MPRD MPRI NAA30 NAA35 NAA38 NAPA NAPB NAPG NAT12 NSF PFAAP2 PLIN3 POR1 RAB41 RAB43 RAB6 RAB6A RAB6B RAB9 RAB9A RAB9B RAB9L RAB9P40 RABEPK RANBP2L4 RGP1 RHOBTB3 RIC1 SACM2L SCOC SCOCO SEC34 SNAPA SNAPB SNAPG STX10 STX16 STX6 SYB3 SYN10 SYS1 TGN46 TGN51 TGOLN2 TIP47 TMF1 USP6NL VAMP3 VAMP4 VPS51 VPS52 VPS53 VPS54 VTI1A	Homo sapiens (human)
RHOJ GTPase cycle	ADP-ribosylation factor-like protein 13B ARF GTPase-activating protein GIT1 ARF GTPase-activating protein GIT2 Actin nucleation-promoting factor WAS Actin nucleation-promoting factor WASL Caveolin-1 Cdc42 effector protein 1 Cell division control protein 42 homolog Copine-8 DEP domain-containing protein 1B Dedicator of cytokinesis protein 8 Formin-binding protein 1-like Formin-binding protein 1 Formin-like protein 3 Gap junction alpha-1 protein Inositol polyphosphate 5-phosphatase OCRL Junction plakoglobin Lamina-associated polypeptide 2, isoforms beta/gamma MAGUK p55 subfamily member 7 Metalloreductase STEAP3 NEDD4-like E3 ubiquitin-protein ligase WWP2 Neutral amino acid transporter B(0) Oligophrenin-1 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Protein NipSnap homolog 2 Protein diaphanous homolog 3 Protein scribble homolog Ragulator complex protein LAMTOR1 Ras GTPase-activating-like protein IQGAP3 Ras-related protein Rab-7a Rho GTPase-activating protein 1 Rho GTPase-activating protein 21 Rho GTPase-activating protein 26 Rho GTPase-activating protein 32 Rho GTPase-activating protein 35 Rho GTPase-activating protein 5 Rho GTPase-activating protein SYDE1 Rho guanine nucleotide exchange factor 7 Rho-related GTP-binding protein RhoJ Serine/threonine-protein kinase MRCK alpha Serine/threonine-protein kinase MRCK beta Serine/threonine-protein kinase PAK 1 Serine/threonine-protein kinase PAK 2 Serine/threonine-protein kinase PAK 3 Serine/threonine-protein kinase PAK 4 Sodium bicarbonate cotransporter 3 Stomatin Synaptosomal-associated protein 23 Transferrin receptor protein 1 Triple functional domain protein Vang-like protein 1 Vesicle-associated membrane protein 3 WAS/WASL-interacting protein family member 2	A7KAX9 O00161 O00308 O00401 O00459 O60890 O75323 O75914 O75962 O96013 P02786 P14923 P17302 P27105 P27986 P42167 P42768 P51149 P60953 Q00587 Q01968 Q03135 Q07960 Q13017 Q13153 Q13177 Q14155 Q14160 Q14161 Q15758 Q15836 Q3SXY8 Q5T0N5 Q5T2T1 Q5T5U3 Q5VT25 Q658P3 Q6IAA8 Q6ZW31 Q86VI3 Q86YQ8 Q8IVF7 Q8NF50 Q8TAA9 Q8TCU6 Q8TF74 Q8WUY9 Q96RU3 Q9H4E5 Q9NRY4 Q9NSV4 Q9UNA1 Q9Y2X7 Q9Y5S2 Q9Y6M7	ARHGAP1 ARHGAP10 ARHGAP21 ARHGAP26 ARHGAP32 ARHGAP35 ARHGAP5 ARHGEF7 ARHJ ARL13B ARL2L1 ASCT2 BND7 BORG5 BT C11orf59 C1orf39 CAV CAV1 CDC42 CDC42BPA CDC42BPB CDC42EP1 CDC42GAP CEP1 COOL1 CPNE8 CRIB1 CTNNG DEPDC1B DIAP3 DIAPH3 DOCK8 DP3 EPB72 FBP17 FHOD3 FMNL3 FNBP1 FNBP1L FRL2 GBAS GIT1 GIT2 GJA1 GJAL GRAF GRB1 GRF1 GRIT GRLF1 IMD2 IQGAP3 JUP KIAA0142 KIAA0147 KIAA0148 KIAA0451 KIAA0554 KIAA0621 KIAA0712 KIAA1124 KIAA1142 KIAA1415 KIAA1424 KIAA1722 KIAA2014 LAMTOR1 LAP2 LAP4 M7V1 MPP7 MSE55 NBC2 NBC2B NBC3 NBCn1 NIPSNAP2 OCRL OCRL1 OPHN1 OPHN1L OPHN3 P190A P85SPR PAK1 PAK2 PAK3 PAK3BP PAK4 PDRO PIK3R1 PIK3R2 PIXB PREX1 RAB7 RAB7A RASL7B RDR RDRC RHOGAP1 RHOGAP5 RHOI RHOJ RICS SBC2 SCRB1 SCRIB SLC1A5 SLC4A6 SLC4A7 SNAP23 STB2 STEAP3 STOM SYB3 SYDE1 TCL TFRC TMPO TOCA1 TRIO TSAP6 VAMP3 VANGL1 VARTUL WAS WASL WBP3 WICH WIPF2 WIRE WWP2 XTP8 p190ARHOGAP	Homo sapiens (human)
RHOQ GTPase cycle	ADP-ribosylation factor-like protein 13B ARF GTPase-activating protein GIT1 ARF GTPase-activating protein GIT2 Actin nucleation-promoting factor WASL Caveolin-1 Cdc42 effector protein 1 Cdc42 effector protein 2 Cdc42 effector protein 3 Cdc42 effector protein 4 Cdc42-interacting protein 4 Cell division control protein 42 homolog Copine-8 Cystic fibrosis transmembrane conductance regulator DEP domain-containing protein 1B Formin-binding protein 1 Gap junction alpha-1 protein Glucose-fructose oxidoreductase domain-containing protein 1 Golgi-associated PDZ and coiled-coil motif-containing protein Intersectin-1 Junction plakoglobin MAGUK p55 subfamily member 7 Metalloreductase STEAP3 NEDD4-like E3 ubiquitin-protein ligase WWP2 Neutral amino acid transporter B(0) Obscurin Oligophrenin-1 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein Pleckstrin homology domain-containing family G member 3 Protein diaphanous homolog 3 Protein scribble homolog Ragulator complex protein LAMTOR1 Ras GTPase-activating-like protein IQGAP1 Ras GTPase-activating-like protein IQGAP3 Ras-related protein Rab-7a Rho GTPase-activating protein 17 Rho GTPase-activating protein 1 Rho GTPase-activating protein 21 Rho GTPase-activating protein 26 Rho GTPase-activating protein 32 Rho GTPase-activating protein 33 Rho GTPase-activating protein 35 Rho GTPase-activating protein 5 Rho GTPase-activating protein 7 Rho GTPase-activating protein SYDE1 Rho guanine nucleotide exchange factor 7 Rho guanine nucleotide exchange factor 9 Rho-related GTP-binding protein RhoQ SLIT-ROBO Rho GTPase-activating protein 2 Serine/threonine-protein kinase MRCK alpha Serine/threonine-protein kinase MRCK beta Serine/threonine-protein kinase PAK 1 Serine/threonine-protein kinase PAK 2 Serine/threonine-protein kinase PAK 4 Sodium bicarbonate cotransporter 3 Stomatin Synaptosomal-associated protein 23 Transferrin receptor protein 1 Vang-like protein 1 Vesicle-associated membrane protein 3	A1L390 A7KAX9 O00161 O00308 O00401 O14559 O14613 O43307 O60890 O75044 O96013 P02786 P13569 P14923 P17081 P17302 P27105 P46940 P51149 P60953 Q00587 Q03135 Q07960 Q13017 Q13153 Q13177 Q14155 Q14160 Q14161 Q15642 Q15758 Q15811 Q15836 Q3SXY8 Q5T2T1 Q5T5U3 Q5VST9 Q5VT25 Q658P3 Q68EM7 Q6IAA8 Q6ZW31 Q86VI3 Q86YQ8 Q8TAA9 Q8TCU6 Q8WUY9 Q96QB1 Q96RU3 Q9H3Q1 Q9HD26 Q9NRY4 Q9NSV4 Q9NXC2 Q9UKI2 Q9UNA1 Q9Y2X7 Q9Y5S2 Q9Y6M7	ABCC7 ARHDH9 ARHGAP1 ARHGAP10 ARHGAP17 ARHGAP21 ARHGAP26 ARHGAP32 ARHGAP33 ARHGAP34 ARHGAP35 ARHGAP5 ARHGAP7 ARHGEF7 ARHGEF9 ARHQ ARL13B ARL2L1 ASCT2 BND7 BORG1 BORG2 BORG4 BORG5 BT C11orf59 C6orf114 CAL CAV CAV1 CDC42 CDC42BPA CDC42BPB CDC42EP1 CDC42EP2 CDC42EP3 CDC42EP4 CDC42GAP CEP1 CEP2 CEP3 CEP4 CFTR CIP4 COOL1 CPNE8 CRIB1 CTNNG DEPDC1B DIAP3 DIAPH3 DLC1 DP3 EPB72 FBP17 FIG FNBP1 FNBP2 GFOD1 GIT1 GIT2 GJA1 GJAL GOPC GRAF GRF1 GRIT GRLF1 IQGAP1 IQGAP3 ITSN ITSN1 JUP KIAA0051 KIAA0142 KIAA0147 KIAA0148 KIAA0424 KIAA0451 KIAA0456 KIAA0554 KIAA0599 KIAA0621 KIAA0712 KIAA1124 KIAA1142 KIAA1415 KIAA1424 KIAA1556 KIAA1639 KIAA1722 KIAA1723 LAMTOR1 LAP4 M7V1 MPP7 MSE55 NBC2 NBC2B NBC3 NBCn1 OBSCN OPHN1 OPHN1L P190A P85SPR PAK1 PAK2 PAK3BP PAK4 PDRO PIXB PLEKHG3 PREX1 RAB7 RAB7A RASL7A RDR RDRC RHOGAP1 RHOGAP5 RHOQ RICH1 RICS SBC2 SCRB1 SCRIB SH3D1A SLC1A5 SLC4A6 SLC4A7 SNAP23 SNX26 SRGAP2 SRGAP2A STARD12 STB2 STEAP3 STOM STOT STP SYB3 SYDE1 TC10 TCGAP TFRC TRIP10 TSAP6 VAMP3 VANGL1 VARTUL WASL WWP2 XTP8 p190ARHOGAP	Homo sapiens (human)
Late endosomal microautophagy	ADP-ribosylation factor-like protein 13B Centrin-1 Charged multivesicular body protein 2a Charged multivesicular body protein 2b Charged multivesicular body protein 3 Charged multivesicular body protein 4a Charged multivesicular body protein 4b Charged multivesicular body protein 4c Charged multivesicular body protein 6 Charged multivesicular body protein 7 Cystic fibrosis transmembrane conductance regulator Heat shock cognate 71 kDa protein Hemoglobin subunit beta Histone deacetylase 6 Intraflagellar transport protein 88 homolog Multivesicular body subunit 12A Multivesicular body subunit 12B Parkinson disease protein 7 Pericentrin Perilipin-2 Perilipin-3 Polyubiquitin-B Polyubiquitin-C Ribonuclease pancreatic Tumor susceptibility gene 101 protein Ubiquitin-associated protein 1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Vacuolar protein sorting-associated protein 28 homolog Vacuolar protein sorting-associated protein 37A Vacuolar protein sorting-associated protein 37B Vacuolar protein sorting-associated protein 37C Vacuolar protein sorting-associated protein 37D	A5D8V6 O43633 O60664 O95613 P07998 P0CG47 P0CG48 P11142 P13569 P62979 P62987 P68871 Q12798 Q13099 Q3SXY8 Q86XT2 Q8NEZ2 Q8WUX9 Q96CF2 Q96EY5 Q96FZ7 Q99497 Q99541 Q99816 Q9BY43 Q9H444 Q9H7P6 Q9H9H4 Q9NZ09 Q9UBN7 Q9UK41 Q9UQN3 Q9Y3E7	ABCC7 ADFP ARL13B ARL2L1 BC2 C14orf123 C20orf178 C9orf28 CEN1 CETN CETN1 CFBP CFTR CGI149 CHMP2 CHMP2A CHMP2B CHMP3 CHMP4A CHMP4B CHMP4C CHMP6 CHMP7 FAM125A FAM125B HBB HCRP1 HDAC6 HSC70 HSP73 HSPA10 HSPA8 IFT88 KIAA0402 KIAA0901 M6PRBP1 MVB12A MVB12B NEDF PARK7 PCNT PCNT2 PLIN2 PLIN3 PML39 RIB1 RNASE1 RNS1 RPS27A SHAX1 SHAX2 SHAX3 TG737 TIP47 TSG101 TTC10 UBA52 UBA80 UBAP1 UBB UBC UBCEP1 UBCEP2 VPS20 VPS24 VPS28 VPS37A VPS37B VPS37C VPS37D WBSCR24	Homo sapiens (human)
Aggrephagy	ADP-ribosylation factor-like protein 13B Centrin-1 Cystic fibrosis transmembrane conductance regulator Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic dynein 1 light intermediate chain 1 Cytoplasmic dynein 1 light intermediate chain 2 Dynein light chain 1, cytoplasmic Dynein light chain 2, cytoplasmic E3 ubiquitin-protein ligase parkin Heat shock factor protein 1 Heat shock protein HSP 90-alpha Histone deacetylase 6 Intraflagellar transport protein 88 homolog Parkinson disease protein 7 Pericentrin Polyubiquitin-B Polyubiquitin-C Transitional endoplasmic reticulum ATPase Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O14576 O43237 O60260 O95613 P07900 P0CG47 P0CG48 P13569 P55072 P61088 P62979 P62987 P63167 Q00613 Q12798 Q13099 Q13404 Q13409 Q14204 Q3SXY8 Q96FJ2 Q99497 Q9UBN7 Q9Y6G9	ABCC7 ARL13B ARL2L1 BLU CEN1 CETN CETN1 CFTR CROC1 DHC1 DLC1 DLC2 DNCH1 DNCI1 DNCI2 DNCIC1 DNCIC2 DNCL DNCL1 DNCLC1 DNCLI1 DNCLI2 DNECL DYHC DYNC1H1 DYNC1I1 DYNC1I2 DYNC1LI1 DYNC1LI2 DYNLL1 DYNLL2 HDAC6 HDLC1 HEL-220 HEL-S-70 HSF1 HSP90A HSP90AA1 HSPC1 HSPCA HSTF1 IFT88 KIAA0325 KIAA0402 KIAA0901 LIC2 PARK2 PARK7 PCNT PCNT2 PRKN RPS27A TG737 TTC10 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 UBE2N UBE2V UBE2V1 UEV1 VCP	Homo sapiens (human)
Chaperone Mediated Autophagy	ADP-ribosylation factor-like protein 13B Centrin-1 Cystic fibrosis transmembrane conductance regulator Elongation factor 1-alpha 1 Glial fibrillary acidic protein Heat shock cognate 71 kDa protein Heat shock protein HSP 90-alpha Heat shock protein HSP 90-beta Hemoglobin subunit beta Histone deacetylase 6 Intraflagellar transport protein 88 homolog Lysosome-associated membrane glycoprotein 2 Parkinson disease protein 7 Pericentrin Perilipin-2 Perilipin-3 Polyubiquitin-B Polyubiquitin-C Ribonuclease pancreatic Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O60664 O95613 P07900 P07998 P08238 P0CG47 P0CG48 P11142 P13473 P13569 P14136 P62979 P62987 P68104 P68871 Q12798 Q13099 Q3SXY8 Q99497 Q99541 Q9UBN7	ABCC7 ADFP ARL13B ARL2L1 CEN1 CETN CETN1 CFTR EEF1A EEF1A1 EF1A GFAP HBB HDAC6 HSC70 HSP73 HSP90A HSP90AA1 HSP90AB1 HSP90B HSPA10 HSPA8 HSPC1 HSPC2 HSPC3 HSPCA HSPCB IFT88 KIAA0402 KIAA0901 LAMP2 LENG7 M6PRBP1 PARK7 PCNT PCNT2 PLIN2 PLIN3 RIB1 RNASE1 RNS1 RPS27A TG737 TIP47 TTC10 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)
ARL13B-mediated ciliary trafficking of INPP5E	ADP-ribosylation factor-like protein 13B Phosphatidylinositol polyphosphate 5-phosphatase type IV Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta	O43924 Q3SXY8 Q9NRR6	ARL13B ARL2L1 INPP5E PDE6D PDED	Homo sapiens (human)
RAS processing	ADP-ribosylation factor-like protein 2 Acyl-protein thioesterase 1 Alpha/beta hydrolase domain-containing protein 17A Alpha/beta hydrolase domain-containing protein 17B Alpha/beta hydrolase domain-containing protein 17C Bcl-2-like protein 1 CAAX prenyl protease 2 Calmodulin-1 GTPase HRas GTPase KRas GTPase NRas Golgin subfamily A member 7 Palmitoyltransferase ZDHHC9 Protein farnesyltransferase subunit beta Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Protein kinase C theta type Protein-S-isoprenylcysteine O-methyltransferase Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta Ubiquitin carboxyl-terminal hydrolase 17 cGMP-dependent protein kinase 2	O43924 O60725 O75608 P01111 P01112 P01116 P0DP23 P36404 P49354 P49356 Q04759 Q07817 Q13237 Q5VST6 Q6PCB6 Q6R6M4 Q7Z5G4 Q96GS6 Q9Y256 Q9Y397	ABHD17A ABHD17B ABHD17C APT1 ARL2 BCL2L BCL2L1 BCLX C19orf27 C9orf77 CALM CALM1 CAM CAM1 CXorf11 DUB3 FACE2 FAM108A1 FAM108B1 FAM108C1 FNTA FNTB GCP16 GOLGA7 HRAS HRAS1 ICMT KRAS KRAS2 LPL1 LYPLA1 NRAS PCCMT PDE6D PDED PRKCQ PRKCT PRKG2 PRKGR2 RASK2 RCE1 RCE1A RCE1B USP17 USP17H USP17I USP17J USP17K USP17L USP17L2 USP17M ZDHHC10 ZDHHC9 ZNF379 ZNF380	Homo sapiens (human)
Post-chaperonin tubulin folding pathway	ADP-ribosylation factor-like protein 2 Putative tubulin-like protein alpha-4B Tubulin alpha chain-like 3 Tubulin alpha-1A chain Tubulin alpha-1B chain Tubulin alpha-1C chain Tubulin alpha-3C chain Tubulin alpha-3D chain Tubulin alpha-3E chain Tubulin alpha-4A chain Tubulin alpha-8 chain Tubulin beta-1 chain Tubulin beta-2A chain Tubulin beta-2B chain Tubulin beta-3 chain Tubulin beta-4A chain Tubulin beta-4B chain Tubulin beta-6 chain Tubulin-folding cofactor B Tubulin-specific chaperone A Tubulin-specific chaperone C Tubulin-specific chaperone D Tubulin-specific chaperone E	A6NHL2 O75347 P04350 P0DPH7 P0DPH8 P36404 P68363 P68366 P68371 Q13509 Q13885 Q15813 Q15814 Q6PEY2 Q71U36 Q99426 Q9BQE3 Q9BTW9 Q9BUF5 Q9BVA1 Q9H4B7 Q9H853 Q9NY65	ARL2 CG22 CKAP1 KIAA0988 SSD1 TBCA TBCB TBCC TBCD TBCE TFCD TUBA1 TUBA1A TUBA1B TUBA1C TUBA2 TUBA3 TUBA3C TUBA3D TUBA3E TUBA4 TUBA4A TUBA4B TUBA6 TUBA8 TUBAL2 TUBAL3 TUBB1 TUBB2 TUBB2A TUBB2B TUBB2C TUBB3 TUBB4 TUBB4A TUBB4B TUBB5 TUBB6	Homo sapiens (human)
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane	ADP-ribosylation factor-like protein 2-binding protein ADP-ribosylation factor-like protein 2 ADP/ATP translocase 1 ADP/ATP translocase 2 ADP/ATP translocase 3 Equilibrative nucleoside transporter 1 Equilibrative nucleoside transporter 2 Equilibrative nucleoside transporter 3 Equilibrative nucleoside transporter 4 Sodium/nucleoside cotransporter 1 Sodium/nucleoside cotransporter 2 Solute carrier family 28 member 3	O00337 O43868 P05141 P12235 P12236 P36404 Q14542 Q7RTT9 Q99808 Q9BZD2 Q9HAS3 Q9Y2Y0	AAC1 AAC2 AAC3 ANT1 ANT2 ANT3 ARL2 ARL2BP BART BART1 CNT1 CNT2 CNT3 DER12 ENT1 ENT2 ENT3 ENT4 HNP36 PMAT SLC25A4 SLC25A5 SLC25A6 SLC28A1 SLC28A2 SLC28A3 SLC29A1 SLC29A2 SLC29A3 SLC29A4	Homo sapiens (human)
Trafficking of myristoylated proteins to the cilium	ADP-ribosylation factor-like protein 3 Cystin-1 Nephrocystin-3 Protein XRP2 Protein unc-119 homolog B	A6NIH7 O75695 P36405 Q717R9 Q7Z494	ARFL3 ARL3 CYS1 KIAA2000 NPHP3 RP2 UNC119B	Homo sapiens (human)
LXRs regulate gene expression linked to cholesterol transport and efflux	ADP-ribosylation factor-like protein 4C ATP-binding cassette sub-family G member 1 ATP-binding cassette sub-family G member 5 ATP-binding cassette sub-family G member 8 Apolipoprotein C-I Apolipoprotein C-II Apolipoprotein C-IV Apolipoprotein D Apolipoprotein E Cholesteryl ester transfer protein Endonuclease/exonuclease/phosphatase family domain-containing protein 1 F-box-like/WD repeat-containing protein TBL1X F-box-like/WD repeat-containing protein TBL1XR1 G protein pathway suppressor 2 Helicase MOV-10 Histone acetyltransferase p300 Histone deacetylase 3 Lysine-specific demethylase 3A Lysine-specific demethylase 4A Lysine-specific histone demethylase 1A Lysine-specific histone demethylase 2 Nuclear receptor coactivator 1 Nuclear receptor corepressor 1 Nuclear receptor corepressor 2 Oxysterols receptor LXR-alpha Oxysterols receptor LXR-beta Phospholipid-transporting ATPase ABCA1 Protein argonaute-1 Protein argonaute-2 Protein argonaute-3 Protein argonaute-4 Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta Trinucleotide repeat-containing gene 6A protein Trinucleotide repeat-containing gene 6B protein Trinucleotide repeat-containing gene 6C protein	O15379 O60341 O60907 O75164 O75376 O95477 P02649 P02654 P02655 P05090 P11597 P19793 P28702 P45844 P55055 P55056 P56559 Q09472 Q13133 Q13227 Q15788 Q7L9B9 Q8NB78 Q8NDV7 Q9BZK7 Q9H221 Q9H222 Q9H9G7 Q9HCE1 Q9HCJ0 Q9HCK5 Q9UKV8 Q9UL18 Q9UPQ9 Q9Y4C1 Q9Y618	ABC1 ABC8 ABCA1 ABCG1 ABCG5 ABCG8 AGO1 AGO2 AGO3 AGO4 AOF1 AOF2 APC2 APOC1 APOC2 APOC4 APOD APOE ARL4C ARL7 BHLHE74 C6orf193 CAGH26 CERP CETP CTG26 EEPD1 EIF2C1 EIF2C2 EIF2C3 EIF2C4 EP300 GPS2 HDAC3 IRA1 JHDM2A JHDM3A JMJD1 JMJD1A JMJD2 JMJD2A KDM1 KDM1A KDM1B KDM3A KDM4A KIAA0601 KIAA0677 KIAA0742 KIAA1047 KIAA1093 KIAA1460 KIAA1567 KIAA1582 KIAA1631 KIAA1706 LSD1 LSD2 LXRA LXRB MOV10 NCOA1 NCOR1 NCOR2 NER NR1H2 NR1H3 NR2B1 NR2B2 P300 RXRA RXRB SRC1 TBL1 TBL1X TBL1XR1 TBLR1 TNRC6 TNRC6A TNRC6B TNRC6C TSGA UNR WHT1	Homo sapiens (human)
BBSome-mediated cargo-targeting to cilium	ADP-ribosylation factor-like protein 6 BBSome complex assembly protein BBS10 BBSome complex member BBS1 BBSome complex member BBS2 BBSome complex member BBS4 BBSome complex member BBS5 BBSome complex member BBS7 BBSome-interacting protein 1 Chaperonin-containing T-complex member BBS12 Leucine zipper transcription factor-like protein 1 Melanin-concentrating hormone receptor 1 Molecular chaperone MKKS Protein PTHB1 Protein smoothened Rab-3A-interacting protein Somatostatin receptor type 3 T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit gamma T-complex protein 1 subunit theta Tetratricopeptide repeat protein 8	A8MTZ0 P17987 P32745 P48643 P49368 P50990 P50991 P78371 Q3SYG4 Q6ZW61 Q8IWZ6 Q8N3I7 Q8NFJ9 Q8TAM1 Q8TAM2 Q96QF0 Q96RK4 Q99705 Q99835 Q9BXC9 Q9H0F7 Q9NPJ1 Q9NQ48	99D8.1 ARL6 BBIP1 BBIP10 BBS1 BBS10 BBS12 BBS2 BBS2L1 BBS2L2 BBS3 BBS4 BBS5 BBS6 BBS7 BBS8 BBS9 C12orf58 C21orf112 C4orf24 CCT1 CCT2 CCT3 CCT4 CCT5 CCT8 CCTA CCTB CCTD CCTE CCTG CCTQ GPR24 KIAA0002 KIAA0098 LZTFL1 MCHR1 MKKS NCRNA00081 PTHB1 RAB3IP RABIN8 SLC1 SMO SMOH SRB SSTR3 TCP1 TRIC5 TTC8	Homo sapiens (human)
POLB-Dependent Long Patch Base Excision Repair	ADP-ribosylhydrolase ARH3 DNA ligase 1 DNA polymerase beta DNA repair nuclease/redox regulator APEX1 Flap endonuclease 1 Poly [ADP-ribose] polymerase 1 Poly [ADP-ribose] polymerase 2 Poly(ADP-ribose) glycohydrolase	P06746 P09874 P18858 P27695 P39748 Q86W56 Q9NX46 Q9UGN5	ADPRHL2 ADPRS ADPRT ADPRT2 ADPRTL2 APE APE1 APEX APEX1 APX ARH3 FEN1 HAP1 LIG1 PARG PARP1 PARP2 POLB PPOL RAD2 REF1	Homo sapiens (human)
Vpr-mediated induction of apoptosis by mitochondrial outer membrane permeabilization	ADP/ATP translocase 1 ADP/ATP translocase 2 ADP/ATP translocase 3 Protein Vpr	P05141 P12235 P12236 P69726	AAC1 AAC2 AAC3 ANT1 ANT2 ANT3 SLC25A4 SLC25A5 SLC25A6 vpr	Homo sapiens (human)
Mitochondrial Uncoupling	ADP/ATP translocase 1 Mitochondrial brown fat uncoupling protein 1	P12235 P25874	AAC1 ANT1 SLC25A4 SLC25A7 UCP UCP1	Homo sapiens (human)
Influenza Virus Induced Apoptosis	ADP/ATP translocase 3 Neuraminidase Protein PB1-F2 Transforming growth factor beta-1 proprotein	P01137 P03468 P0C0U1 P12236	AAC3 ANT3 NA PB1 SLC25A6 TGFB TGFB1	Homo sapiens (human)
RNA Polymerase II Pre-transcription Events	AF4/FMR2 family member 4 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIE subunit 1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Parafibromin Protein AF-9 Protein ENL Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 RNA polymerase-associated protein RTF1 homolog Superkiller complex protein 8 TATA-binding protein-associated factor 2N TATA-box-binding protein Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription elongation factor SPT6 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 1-like Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 3 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 4B Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7-like Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9 Transcription initiation factor TFIID subunit 9B	O00267 O00268 O15514 O60563 O60583 O75909 P13984 P18074 P18615 P19387 P19388 P19447 P20226 P21675 P23193 P24928 P29083 P29084 P30876 P32780 P35269 P36954 P42568 P49848 P50613 P50750 P51946 P51948 P52298 P52434 P52435 P52655 P52657 P53803 P55199 P61218 P62487 P62875 P63272 Q00403 Q03111 Q08945 Q09161 Q12962 Q13888 Q13889 Q14241 Q15369 Q15370 Q15542 Q15543 Q15544 Q15545 Q16514 Q16594 Q5H9L4 Q5VWG9 Q6P1J9 Q6P1X5 Q6PD62 Q6ZYL4 Q7KZ85 Q8IXH7 Q8IYF1 Q8IZX4 Q8N7H5 Q8WVC0 Q8WX92 Q92541 Q92750 Q92759 Q92804 Q96CJ1 Q96JC9 Q96ST2 Q9GZS3 Q9H3P2 Q9HBM6 Q9UHB7 Q9Y5B0 Q9Y5B9	AF5Q31 AF9 AFF4 BA2R BTF2 BTF2P44 C19orf17 C1orf28 C6orf175 CAK CAK1 CAP35 CBP20 CBP80 CCG1 CCGS CCNH CCNK CCNT1 CCNT2 CDC2L4 CDC73 CDK7 CDK9 CDKN7 CIF150 COBRA1 CPR4 CTDP1 CTR9 EAF1 EAF2 ELL ELOA ELOA2 ELOB ELOC ENL ERCC2 ERCC3 FACT140 FACT80 FACTP140 FCP1 GTF2A1 GTF2A2 GTF2B GTF2D1 GTF2E1 GTF2E2 GTF2F1 GTF2F2 GTF2H1 GTF2H2 GTF2H3 GTF2H4 GTF2H5 GTF2S HRPT2 IWS1 IWS1L KIAA0155 KIAA0162 KIAA0252 KIAA1182 LEO1 LTG19 MAT1 MCEF MLLT1 MLLT3 MNAT1 MO15 NCBP NCBP1 NCBP2 NELFA NELFB NELFCD NELFD NELFE PAF1 PD2 POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RBP56 RD RDBP RDL RNF66 RPB7 RTF1 SH2BP1 SKIC8 SPT4H SPT5 SPT5H SPT6H SSRP1 STK1 SUPT16H SUPT4H SUPT4H1 SUPT5H SUPT6H TAF1 TAF10 TAF11 TAF12 TAF13 TAF15 TAF1L TAF2 TAF2A TAF2B TAF2C TAF2C1 TAF2C2 TAF2D TAF2E TAF2F TAF2G TAF2H TAF2I TAF2J TAF2K TAF2N TAF2Q TAF3 TAF4 TAF4A TAF4B TAF5 TAF6 TAF7 TAF7L TAF9 TAF9B TAF9L TAFII105 TAFII130 TAFII135 TAFII18 TAFII20 TAFII30 TAFII31 TAFII55 TAFII70 TAK TBP TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TF2A1 TF2A2 TF2B TF2D TF2E1 TF2E2 TFIIB TFIID TFIIS TH1 TH1L TRAITS TTDA WDR61 WHSC2 XPB XPBC XPD XPDC YEATS1 YEATS3	Homo sapiens (human)
Formation of RNA Pol II elongation complex	AF4/FMR2 family member 4 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Parafibromin Protein AF-9 Protein ENL Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 RNA polymerase-associated protein RTF1 homolog Superkiller complex protein 8 Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription elongation factor SPT6	O00267 O15514 O60563 O60583 O75909 P13984 P18074 P18615 P19387 P19388 P19447 P23193 P24928 P30876 P32780 P35269 P36954 P42568 P50613 P50750 P51946 P51948 P52298 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q03111 Q08945 Q09161 Q13888 Q13889 Q14241 Q15369 Q15370 Q6P1J9 Q6PD62 Q6ZYL4 Q7KZ85 Q8IXH7 Q8IYF1 Q8N7H5 Q8WVC0 Q8WX92 Q92541 Q92759 Q96CJ1 Q96JC9 Q96ST2 Q9GZS3 Q9H3P2 Q9UHB7 Q9Y5B0 Q9Y5B9	AF5Q31 AF9 AFF4 BTF2 BTF2P44 C19orf17 C1orf28 C6orf175 CAK CAK1 CAP35 CBP20 CBP80 CCNH CCNK CCNT1 CCNT2 CDC2L4 CDC73 CDK7 CDK9 CDKN7 COBRA1 CPR4 CTDP1 CTR9 EAF1 EAF2 ELL ELOA ELOA2 ELOB ELOC ENL ERCC2 ERCC3 FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2H1 GTF2H2 GTF2H3 GTF2H4 GTF2H5 GTF2S HRPT2 IWS1 IWS1L KIAA0155 KIAA0162 KIAA0252 KIAA1182 LEO1 LTG19 MAT1 MCEF MLLT1 MLLT3 MNAT1 MO15 NCBP NCBP1 NCBP2 NELFA NELFB NELFCD NELFD NELFE PAF1 PD2 POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RDL RNF66 RPB7 RTF1 SH2BP1 SKIC8 SPT4H SPT5 SPT5H SPT6H SSRP1 STK1 SUPT16H SUPT4H SUPT4H1 SUPT5H SUPT6H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L TRAITS TTDA WDR61 WHSC2 XPB XPBC XPD XPDC YEATS1 YEATS3	Homo sapiens (human)
RNA Polymerase II Transcription Elongation	AF4/FMR2 family member 4 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Parafibromin Protein AF-9 Protein ENL Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 RNA polymerase-associated protein RTF1 homolog Superkiller complex protein 8 Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription elongation factor SPT6	O00267 O15514 O60563 O60583 O75909 P13984 P18074 P18615 P19387 P19388 P19447 P23193 P24928 P30876 P32780 P35269 P36954 P42568 P50613 P50750 P51946 P51948 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q03111 Q08945 Q13888 Q13889 Q14241 Q15369 Q15370 Q6P1J9 Q6PD62 Q6ZYL4 Q7KZ85 Q8IXH7 Q8IYF1 Q8N7H5 Q8WVC0 Q8WX92 Q92541 Q92759 Q96CJ1 Q96JC9 Q96ST2 Q9GZS3 Q9H3P2 Q9UHB7 Q9Y5B0 Q9Y5B9	AF5Q31 AF9 AFF4 BTF2 BTF2P44 C19orf17 C1orf28 C6orf175 CAK CAK1 CAP35 CCNH CCNK CCNT1 CCNT2 CDC2L4 CDC73 CDK7 CDK9 CDKN7 COBRA1 CPR4 CTDP1 CTR9 EAF1 EAF2 ELL ELOA ELOA2 ELOB ELOC ENL ERCC2 ERCC3 FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2H1 GTF2H2 GTF2H3 GTF2H4 GTF2H5 GTF2S HRPT2 IWS1 IWS1L KIAA0155 KIAA0162 KIAA0252 KIAA1182 LEO1 LTG19 MAT1 MCEF MLLT1 MLLT3 MNAT1 MO15 NELFA NELFB NELFCD NELFD NELFE PAF1 PD2 POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RDL RNF66 RPB7 RTF1 SH2BP1 SKIC8 SPT4H SPT5 SPT5H SPT6H SSRP1 STK1 SUPT16H SUPT4H SUPT4H1 SUPT5H SUPT6H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L TRAITS TTDA WDR61 WHSC2 XPB XPBC XPD XPDC YEATS1 YEATS3	Homo sapiens (human)
Aryl hydrocarbon receptor signalling	AH receptor-interacting protein Aryl hydrocarbon receptor nuclear translocator 2 Aryl hydrocarbon receptor nuclear translocator Aryl hydrocarbon receptor repressor Aryl hydrocarbon receptor Heat shock protein HSP 90-beta Prostaglandin E synthase 3	A9YTQ3 O00170 P08238 P27540 P35869 Q15185 Q9HBZ2	AHR AHRR AIP ARNT ARNT2 BHLHE1 BHLHE2 BHLHE76 BHLHE77 HSP90AB1 HSP90B HSPC2 HSPC3 HSPCB KIAA0307 KIAA1234 P23 PTGES3 TEBP XAP2	Homo sapiens (human)
Signaling by LTK	ALK and LTK ligand 1 ALK and LTK ligand 2 Activated CDC42 kinase 1 Growth factor receptor-bound protein 2 Insulin receptor substrate 1 Leukocyte tyrosine kinase receptor Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Son of sevenless homolog 1	O00459 P27986 P29376 P35568 P42336 P42338 P62993 Q07889 Q07912 Q6UX46 Q6UXT8	ACK1 ALKAL1 ALKAL2 ASH FAM150A FAM150B GRB1 GRB2 IRS1 LTK PIK3C1 PIK3CA PIK3CB PIK3R1 PIK3R2 SOS1 TNK2 TYK1	Homo sapiens (human)
ALK mutants bind TKIs	ALK tyrosine kinase receptor B-cell lymphoma/leukemia 11A Baculoviral IAP repeat-containing protein 6 Clathrin heavy chain 1 Echinoderm microtubule-associated protein-like 4 Eukaryotic translation initiation factor 2-alpha kinase 3 Fibronectin Huntingtin-interacting protein 1 Nucleophosmin Protein phosphatase 1B Striatin cAMP-dependent protein kinase type I-alpha regulatory subunit	O00291 O43815 O75688 P02751 P06748 P10644 Q00610 Q9H165 Q9HC35 Q9NR09 Q9NZJ5 Q9UM73	ALK BCL11A BIRC6 C2orf2 CLH17 CLTC CLTCL2 CTIP1 EIF2AK3 EMAPL4 EML4 EVI9 FN FN1 HIP1 KIAA0034 KIAA1289 KIAA1809 NPM NPM1 PEK PERK PKR1 PP2CB PPM1B PRKAR1 PRKAR1A STRN TSE1 ZNF856	Homo sapiens (human)
MDK and PTN in ALK signaling	ALK tyrosine kinase receptor Midkine Pleiotrophin Receptor-type tyrosine-protein phosphatase zeta	P21246 P21741 P23471 Q9UM73	ALK HBNF1 HTPZP2 MDK MK1 NEGF1 NEGF2 PTN PTPRZ PTPRZ1 PTPRZ2 PTPZ	Homo sapiens (human)

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