GlyCosmos Portal

Mus musculus (house mouse)

Summary

Taxonomy ID: 10090
PubChem Taxonomy: 10090

Genes (662) Glycans (1270) Glycoproteins (13000) Lectins (276) Pathways (1335)

Displaying entries **251 - 275** of **1335** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol
RHOBTB3 ATPase cycle	5-hydroxytryptamine receptor 7 Cullin-3 G1/S-specific cyclin-E1 Hepatocyte growth factor-regulated tyrosine kinase substrate Leucine-rich repeat-containing protein 41 Perilipin-3 Ras-related protein Rab-9A Ras-related protein Rab-9B Rho-related BTB domain-containing protein 3 von Hippel-Lindau disease tumor suppressor	P32304 P40338 Q61457 Q8BHH2 Q8K1C9 Q99LI8 Q9CTN4 Q9DBG5 Q9JLV5 Q9R0M6	Ccne Ccne1 Cul3 Hgs Hrs Htr7 Kiaa0878 Lrrc41 M6prbp1 Muf1 Plin3 Rab9 Rab9a Rab9b Rhobtb3 Sid99 Tip47 Vhl Vhlh
Sperm Motility And Taxes	Cation channel sperm-associated auxiliary subunit beta Cation channel sperm-associated auxiliary subunit delta Cation channel sperm-associated protein 1 Cation channel sperm-associated protein 2 Cation channel sperm-associated protein 3 Cation channel sperm-associated protein 4 Cation channel sperm-associated protein subunit gamma 1 Potassium channel subfamily U member 1 Voltage-gated hydrogen channel 1	A2ARP9 A2RTF1 E9Q355 E9Q9F6 O54982 Q3U2S8 Q80W99 Q8BVN3 Q91ZR5	Bts Catsper1 Catsper2 Catsper3 Catsper4 Catsperb Catsperd Catsperg1 Hvcn1 Kcnma3 Kcnu1 Ksper Slo3 Tmem146 Vsop
Acyl chain remodelling of PI	Cytosolic phospholipase A2 delta Cytosolic phospholipase A2 epsilon Cytosolic phospholipase A2 gamma Cytosolic phospholipase A2 zeta Cytosolic phospholipase A2 Group 10 secretory phospholipase A2 Group IID secretory phospholipase A2 Group IIE secretory phospholipase A2 Group IIF secretory phospholipase A2 Group XIIA secretory phospholipase A2 Lysophospholipid acyltransferase 7 Phospholipase A and acyltransferase 3 Phospholipase A2 group V Phospholipase A2, membrane associated Phospholipase A2 Phospholipase B-like 1 Secretory phospholipase A2 receptor	P31482 P47713 P97391 Q50L41 Q50L42 Q50L43 Q62028 Q64GA5 Q8CHK3 Q8R3U1 Q8VCI0 Q9EPR2 Q9QUL3 Q9QXX3 Q9QZT4 Q9WVF6 Q9Z0Y2	Bb1 Cpla2 H-rev107 Hrasls3 Hrev107 Leng4 Lpiat1 Mboat7 Oact7 Pla2 Pla2a2 Pla2g10 Pla2g12 Pla2g12a Pla2g16 Pla2g1b Pla2g1br Pla2g2a Pla2g2d Pla2g2e Pla2g2f Pla2g4 Pla2g4a Pla2g4c Pla2g4d Pla2g4e Pla2g4f Pla2g5 Pla2r1 Plaat3 Plbd1 Splash
Phosphate bond hydrolysis by NUDT proteins	8-oxo-dGDP phosphatase NUDT18 ADP-ribose pyrophosphatase, mitochondrial ADP-sugar pyrophosphatase Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase Nucleotide triphosphate diphosphatase NUDT15 Oxidized purine nucleoside triphosphate hydrolase U8 snoRNA-decapping enzyme	P53368 Q3U2V3 Q6P3D0 Q8BG93 Q8BVU5 Q99KS6 Q9JKX6	Adprm Mth1 Mth2 Nudt1 Nudt15 Nudt16 Nudt18 Nudt5 Nudt9
VEGF ligand-receptor interactions	Placenta growth factor Vascular endothelial growth factor A, long form Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D	P49764 P49766 P97946 P97953 Q00731	Figf Pgf Plgf Vegf Vegfa Vegfb Vegfc Vegfd Vrf
PI3K/AKT Signaling	3-phosphoinositide-dependent protein kinase 1 Acyl-coenzyme A thioesterase THEM4 Amphiregulin B-lymphocyte antigen CD19 Beta-klotho Epidermal growth factor receptor Epigen Estrogen receptor beta Estrogen receptor Fibroblast growth factor 10 Fibroblast growth factor 15 Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 18 Fibroblast growth factor 1 Fibroblast growth factor 20 Fibroblast growth factor 22 Fibroblast growth factor 23 Fibroblast growth factor 2 Fibroblast growth factor 3 Fibroblast growth factor 4 Fibroblast growth factor 5 Fibroblast growth factor 6 Fibroblast growth factor 7 Fibroblast growth factor 8 Fibroblast growth factor 9 Fibroblast growth factor receptor 1 Fibroblast growth factor receptor 2 Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 4 Fibroblast growth factor receptor substrate 2 Fms-related tyrosine kinase 3 ligand GRB2-associated-binding protein 1 GRB2-associated-binding protein 2 Hepatocyte growth factor receptor Hepatocyte growth factor Inducible T-cell costimulator Insulin receptor substrate 1 Insulin receptor substrate 2 Interleukin-1 receptor accessory protein Interleukin-1 receptor-associated kinase 1 Interleukin-1 receptor-associated kinase 4 Interleukin-1 receptor-like 1 Interleukin-33 Kit ligand Klotho Mast/stem cell growth factor receptor Kit Myeloid differentiation primary response protein MyD88 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 3-kinase regulatory subunit gamma Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Phosphoinositide 3-kinase adapter protein 1 Platelet-derived growth factor receptor alpha Platelet-derived growth factor receptor beta Platelet-derived growth factor subunit A Platelet-derived growth factor subunit B Pro-epidermal growth factor Pro-neuregulin-1, membrane-bound isoform Pro-neuregulin-2, membrane-bound isoform Pro-neuregulin-3, membrane-bound isoform Probetacellulin Proepiregulin Proheparin-binding EGF-like growth factor Proline-rich protein 5 Proto-oncogene tyrosine-protein kinase LCK Proto-oncogene tyrosine-protein kinase Src Proto-oncogene vav Protransforming growth factor alpha RAC-alpha serine/threonine-protein kinase RAC-beta serine/threonine-protein kinase RAC-gamma serine/threonine-protein kinase Rapamycin-insensitive companion of mTOR Ras-related C3 botulinum toxin substrate 1 Ras-related C3 botulinum toxin substrate 2 Receptor tyrosine-protein kinase erbB-2 Receptor tyrosine-protein kinase erbB-3 Receptor tyrosine-protein kinase erbB-4 Receptor-type tyrosine-protein kinase FLT3 Rho-related GTP-binding protein RhoG Serine/threonine-protein kinase Sgk1 Serine/threonine-protein kinase mTOR Striatin T-cell receptor-associated transmembrane adapter 1 T-cell-specific surface glycoprotein CD28 T-lymphocyte activation antigen CD80 T-lymphocyte activation antigen CD86 TNF receptor-associated factor 6 Target of rapamycin complex 2 subunit MAPKAP1 Target of rapamycin complex subunit LST8 Tribbles homolog 3 Tyrosine-protein kinase Fyn Tyrosine-protein phosphatase non-receptor type 11	A0A140LHZ9 O08537 O08908 O35082 O35181 O35565 O35622 O35904 O55106 O89101 P01132 P05480 P05524 P05532 P05622 P06240 P11403 P14719 P15655 P15656 P16056 P16092 P19785 P20033 P20826 P21658 P21803 P22366 P25918 P26450 P26618 P27870 P31041 P31240 P31750 P31955 P35235 P35569 P36363 P37237 P39688 P42082 P42337 P48030 P49772 P54130 P56974 P61148 P63001 P63075 P70196 P70424 P81122 P84096 Q00342 Q00609 Q01279 Q03142 Q05144 Q05928 Q06186 Q08048 Q3UU67 Q3UUI3 Q60823 Q61521 Q61526 Q61527 Q61730 Q61851 Q62406 Q64143 Q6QI06 Q812A5 Q8BKH7 Q8BTI9 Q8BVZ5 Q8C180 Q8K4K2 Q8R4K2 Q924X1 Q99N32 Q9DCJ1 Q9EPC2 Q9EQ32 Q9ESL8 Q9ESL9 Q9ESS2 Q9JLN9 Q9QYY0 Q9WUA6 Q9WVC6 Q9WVS0 Q9Z1S8 Q9Z2A0	Aigf Ailim Akt Akt1 Akt2 Akt3 Areg Arhg B7 Bcap Bcn Bek Betakl Btc Cd19 Cd28 Cd80 Cd86 Ctmp Dtr Ect1 Egf Egfr Epgn Erbb2 Erbb3 Erbb4 Ereg Esr Esr1 Esr2 Estr Estra Estrb Fgf-1 Fgf-2 Fgf-3 Fgf-4 Fgf-5 Fgf-6 Fgf-7 Fgf-9 Fgf1 Fgf10 Fgf15 Fgf16 Fgf17 Fgf18 Fgf2 Fgf20 Fgf22 Fgf23 Fgf3 Fgf4 Fgf5 Fgf6 Fgf7 Fgf8 Fgf9 Fgfa Fgfr-4 Fgfr1 Fgfr2 Fgfr3 Fgfr4 Flg Flk-2 Flt-3 Flt3 Flt3l Flt3lg Frap Frap1 Frs2 Frs2a Fyn Gab1 Gab2 Gbl Hbegf Hegfl Hgf Hstf2 Icos Il1rak Il1rap Il1rl1 Il33 Int-2 Irak1 Irak4 Irs-1 Irs1 Irs2 Kfgf Kgf Kiaa1999 Kiaa3023 Kit Kitl Kitlg Kl Klb Lck Lsk-t Lst8 Ly84 Mapkap1 Mer4 Met Mfr3 Mgf Mip1 Mlst8 Mpk-11 Mtor Myd88 Neu Nipk Nr3a1 Nr3a2 Nrg1 Nrg2 Nrg3 Pdgfa Pdgfb Pdgfr Pdgfr1 Pdgfra Pdgfrb Pdk1 Pdpk1 Pik3ap1 Pik3ca Pik3cb Pik3cd Pik3r1 Pik3r2 Pik3r3 Protor1 Prr5 Ptpn11 Rac Rac1 Rac2 Rhog Rictor Sam3 Sdgf Sgk Sgk1 Sid10750 Sin1 Sis Sl Slf Src St2 Ste2 Strn Tgfa Them4 Traf6 Trat1 Trb3 Trib3 Vav Vav1
Chylomicron remodeling	Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-IV Apolipoprotein A-V Apolipoprotein B-100 Apolipoprotein C-II Apolipoprotein C-III Apolipoprotein E Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 Lipoprotein lipase	E9Q414 P06728 P08226 P09813 P11152 P33622 Q00623 Q05020 Q8C7G5 Q9D1N2	Apoa1 Apoa2 Apoa4 Apoa5 Apob Apoc2 Apoc3 Apoe Gpihbp1 Hbp1 Lpl Rap3
Nitric oxide stimulates guanylate cyclase	Nitric oxide synthase 1 Nitric oxide synthase 3 Nitric oxide synthase, inducible	P29477 P70313 Q9Z0J4	Ecnos Inosl Nos1 Nos2 Nos3
VxPx cargo-targeting to cilium	ADP-ribosylation factor 4 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 Cyclic nucleotide-gated channel alpha-2 Cyclic nucleotide-gated channel alpha-4 Cyclic nucleotide-gated channel beta-1 Exocyst complex component 1 Exocyst complex component 2 Exocyst complex component 3 Exocyst complex component 4 Exocyst complex component 5 Exocyst complex component 6 Exocyst complex component 7 Exocyst complex component 8 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 Polycystin-1 Polycystin-2 Rab-3A-interacting protein Rab11 family-interacting protein 3 Ras-related protein Rab-11A Ras-related protein Rab-8A Rhodopsin	E1AZ71 O08852 O35245 O35250 O35382 P15409 P55258 P61750 P62492 Q3TPX4 Q3UW12 Q62398 Q68EF0 Q6DFZ1 Q6KAR6 Q6PGF7 Q8CHD8 Q8R313 Q8R3S6 Q9D4H1 Q9QWY8	Arf4 Asap1 Cncg2 Cncg4 Cnga2 Cnga4 Cngb1 Ddef1 Exo70 Exoc1 Exoc2 Exoc3 Exoc4 Exoc5 Exoc6 Exoc7 Exoc8 Gbf1 Kiaa0665 Kiaa1249 Mel Pkd1 Pkd2 Rab11 Rab11a Rab11fip3 Rab3ip Rab8 Rab8a Rabin8 Rho Sec10l1 Sec15a Sec15l1 Sec3 Sec3l1 Sec5 Sec5l1 Sec6l1 Sec8 Sec8l1 Shag1 TRPP2
GABA synthesis	Glutamate decarboxylase 1 Glutamate decarboxylase 2	P48318 P48320	Gad1 Gad2 Gad65 Gad67
Invadopodia formation	Disintegrin and metalloproteinase domain-containing protein 12 Disintegrin and metalloproteinase domain-containing protein 15 Disintegrin and metalloproteinase domain-containing protein 19 SH3 and PX domain-containing protein 2A	O35674 O88839 O89032 Q61824	Adam12 Adam15 Adam19 Fish Mdc15 Mltna Mltnb Sh3md1 Sh3pxd2a Tks5
RNA Polymerase II Pre-transcription Events	AF4/FMR2 family member 4 Btk-PH-domain binding protein CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-K Cyclin-T1 Cyclin-T2 Cyclin-dependent kinase 7 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 ELL-associated factor 1 ELL-associated factor 2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIE subunit 1 General transcription factor IIE subunit 2 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Parafibromin Protein AF-9 Protein IWS1 homolog RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II-associated factor 1 homolog RNA polymerase-associated protein CTR9 homolog RNA polymerase-associated protein LEO1 Superkiller complex protein 8 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor TATA-box binding protein associated factor 4 TATA-box-binding protein Transcription elongation factor A protein 1 Transcription elongation factor SPT4-A Transcription elongation factor SPT5 Transcription elongation factor SPT6 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 13 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 3 Transcription initiation factor TFIID subunit 4B Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9 Transcription initiation factor TFIID subunit 9B Uncharacterized protein	A2AM29 E9QAP7 G5E8Z2 O08740 O08811 O08856 O55201 O70422 O88874 P08775 P10711 P19426 P29037 P49135 P51949 P60898 P61216 P61219 P62488 P62869 P62876 P62915 P63271 P83940 P97760 Q03147 Q08943 Q3THK3 Q3UYV9 Q3V063 Q5HZG4 Q5XJE5 Q61458 Q62018 Q62311 Q62383 Q63871 Q6NZA9 Q7TQK0 Q7TSG2 Q80UV9 Q80UW8 Q80ZM7 Q8BG30 Q8BQ46 Q8C092 Q8C176 Q8C1D8 Q8C4Y3 Q8CB77 Q8CFI7 Q8JZM7 Q8K0H5 Q8K2T8 Q8K2X8 Q8R0A0 Q8VD76 Q8VE65 Q8VI33 Q91ZD6 Q920B9 Q922L6 Q923G2 Q99J95 Q99JX1 Q99PM3 Q9CQ49 Q9D0D5 Q9D4C5 Q9D7M8 Q9D902 Q9DBA9 Q9ERF3 Q9ERL0 Q9ESC8 Q9JIB4 Q9QWV9 Q9R1C0	Af9 Aff4 Alf4 Btf2p44 Cak Cbp20 Cbp80 Ccg1 Ccnh Ccnk Ccnt1 Ccnt2 Cdc73 Cdk7 Cdk9 Cdkn7 Cobra1 Crk4 Ctdp1 Ctr9 D17Wsu155e D17h6s45 Eaf1 Eaf2 Ell Eloa Elob Eloc Ercc2 Ercc3 Fact140 Factp140 Fcp1 Festa Gm185 Gtf2a1 Gtf2a2 Gtf2b Gtf2e1 Gtf2e2 Gtf2f1 Gtf2f2 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Iws1 Iws1l Kiaa0155 Kiaa0162 Leo1 Mat1 Mllt1 Mllt3 Mnat1 Mo15 Mpk-7 Mt1a Ncbp1 Ncbp2 Nelfa Nelfb Nelfcd Nelfd Nelfe Paf1 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Rd Rdbp Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Sh2bp1 Skic8 Spt4h Ssrp1 Supt16 Supt16h Supt4a Supt4h Supt4h1a Supt5 Supt5h Supt6 Supt6h Taf1 Taf10 Taf11 Taf12 Taf13 Taf15 Taf2 Taf2c2 Taf2e Taf2f Taf2g Taf2h Taf2k Taf3 Taf4 Taf4a Taf4b Taf5 Taf6 Taf7 Taf7l2 Taf9 Taf9b Taf9l Tafii105 Tafii30 Tbp Tcea1 Tceat Tceb1 Tceb2 Tceb3 Tfiid Th1 Th1l Traits Wdr61 Whsc2 Whsc2h Xpb Xpbc Xpd
CREB phosphorylation	Cyclic AMP-dependent transcription factor ATF-1 Cyclic AMP-responsive element-binding protein 1 MAP kinase-activated protein kinase 2 Ribosomal protein S6 kinase alpha-1 Ribosomal protein S6 kinase alpha-2 Ribosomal protein S6 kinase alpha-3 Ribosomal protein S6 kinase alpha-5	P18653 P18654 P49138 P81269 Q01147 Q8C050 Q9WUT3	Atf1 Creb-1 Creb1 Mapkapk1a Mapkapk1b Mapkapk1c Mapkapk2 Msk1 Rps6ka-rs1 Rps6ka1 Rps6ka2 Rps6ka3 Rps6ka5 Rps6kc1 Rsk1 Rsk2 Rsk3
Translesion synthesis by POLI	DNA polymerase iota DNA polymerase zeta catalytic subunit DNA repair protein REV1 Mitotic spindle assembly checkpoint protein MAD2B Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG49 P0CG50 P17918 P35601 P62983 P62984 Q61493 Q62193 Q6R3M4 Q8R323 Q8VEE4 Q920Q2 Q99J62 Q9CQ71 Q9D0F6 Q9D752 Q9WUK4	Ibf-1 Mad2b Mad2l2 Pcna Poli Polz Rad30b Recc1 Rev1 Rev1l Rev3l Rev7 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Sez4 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2
Trafficking of AMPA receptors	A-kinase anchor protein 5 Band 4.1-like protein 1 Calcium/calmodulin-dependent protein kinase type II subunit alpha Calcium/calmodulin-dependent protein kinase type II subunit beta Calcium/calmodulin-dependent protein kinase type II subunit delta Calcium/calmodulin-dependent protein kinase type II subunit gamma Disks large homolog 1 Disks large homolog 4 E3 ubiquitin-protein ligase Mdm2 Glutamate receptor 1 Glutamate receptor 3 Glutamate receptor 4 Unconventional myosin-VI Voltage-dependent calcium channel gamma-2 subunit Voltage-dependent calcium channel gamma-3 subunit Voltage-dependent calcium channel gamma-4 subunit Voltage-dependent calcium channel gamma-8 subunit	D3YVF0 O88602 P11798 P23804 P23818 P28652 Q62108 Q64331 Q6PHZ2 Q811D0 Q8VHW2 Q923T9 Q9JJV4 Q9JJV5 Q9Z2H5 Q9Z2W8 Q9Z2W9	Akap150 Akap5 Cacng2 Cacng3 Cacng4 Cacng8 Camk2a Camk2b Camk2d Camk2g Dlg1 Dlg4 Dlgh1 Dlgh4 Epb4 Epb4.1l1 Epb41l1 GluA3 Glur1 Glur3 Glur4 Gria1 Gria3 Gria4 Kiaa0338 Kiaa4163 Kiaa4184 Mdm2 Myo6 Psd95 Stg Sv
Lysosome Vesicle Biogenesis	ADP-ribosylation factor 1 AP-1 complex subunit beta-1 AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-like 2 AP-1 complex subunit mu-1 AP-1 complex subunit mu-2 AP-1 complex subunit sigma-1A AP-1 complex subunit sigma-2 AP-1 complex subunit sigma-3 AP-4 complex subunit beta-1 AP-4 complex subunit epsilon-1 AP-4 complex subunit mu-1 AP-4 complex subunit sigma-1 Amyloid-beta precursor protein Auxilin Beta-arrestin-1 Biogenesis of lysosome-related organelles complex 1 subunit 1 Cathepsin Z Cation-dependent mannose-6-phosphate receptor Charged multivesicular body protein 2a Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Clavesin-1 Clavesin-2 Deoxyribonuclease-2-alpha Dynamin-2 Endophilin-A1 Heat shock cognate 71 kDa protein Hepatocyte growth factor-regulated tyrosine kinase substrate N-acetylglucosamine-6-sulfatase Thioredoxin domain-containing protein 5 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	O08585 O35643 O55102 O70404 O88512 P12023 P22892 P24668 P35585 P39054 P56542 P61967 P63017 P63044 P84078 Q62420 Q68FD5 Q6IRU5 Q7TN05 Q80TZ3 Q80V94 Q8BFR4 Q8BG92 Q8BWG8 Q91W90 Q99LI8 Q9D4C9 Q9DB34 Q9DB50 Q9JKC7 Q9WUU7 Q9WV76 Q9WVL1 Q9WVP1	46mpr A4 AD1 Adtb1 Adtg Ap19 Ap1b1 Ap1g1 Ap1g2 Ap1m1 Ap1m2 Ap1s1 Ap1s2 Ap1s3 Ap4b1 Ap4e1 Ap4m1 Ap4s1 App Arf1 Arrb1 Bloc1s1 Chmp2a Clapg1 Clta Cltb Cltc Cltnm Clvs1 Clvs2 Ctsz Dnajc6 Dnase2 Dnase2a Dnl2 Dnm2 Dyn2 Een1 Gcn5l1 Gns Hgs Hrs Hsc70 Hsc73 Hspa8 Kiaa0473 M6pr Rlbp1l1 Rlbp1l2 Sh3d2a Sh3gl2 Syb2 Tlp46 Txndc5 Vamp2 Vamp8
Resolution of AP sites via the multiple-nucleotide patch replacement pathway	DNA polymerase beta DNA repair nuclease/redox regulator APEX1	P28352 Q8K409	Ape Apex Apex1 Polb Ref1
Switching of origins to a post-replicative state	DNA replication factor Cdt1 DNA replication licensing factor MCM2 DNA replication licensing factor MCM3 DNA replication licensing factor MCM4 DNA replication licensing factor MCM5 DNA replication licensing factor MCM6 DNA replication licensing factor MCM7 Geminin	O88513 P25206 P49717 P49718 P97310 P97311 Q61881 Q8R4E9	Bm28 Cdc21 Cdc46 Cdc47 Cdcl1 Cdt1 Gmnn Kiaa0030 Mcm2 Mcm3 Mcm4 Mcm5 Mcm6 Mcm7 Mcmd Mcmd2 Mcmd3 Mcmd4 Mcmd5 Mcmd6 Mcmd7 Mis5 Ris2
Toll Like Receptor 4 (TLR4) Cascade	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 Bactericidal permeability-increasing protein CD180 antigen Dynamin-1 Dynamin-2 Dynamin-3 Integrin alpha-M Integrin beta-2 Lipopolysaccharide-binding protein Lymphocyte antigen 86 Lymphocyte antigen 96 Monocyte differentiation antigen CD14 TIR domain-containing adapter molecule 2 Toll-like receptor 4 Tyrosine-protein phosphatase non-receptor type 4	O88188 P05555 P10810 P11835 P39053 P39054 Q61805 Q62192 Q67E05 Q8BJQ4 Q8BZ98 Q8CIH5 Q9JHF9 Q9QUK6 Q9WU22	Bpi Cd14 Cd180 Dnm Dnm1 Dnm2 Dnm3 Dyn2 Esop1 Itgam Itgb2 Kiaa0820 Kiaa4093 Lbp Lps Ly78 Ly86 Ly96 Md1 Md2 Plcg2 Ptpn4 Rp105 Ticam2 Tirp Tlr4 Tram
FCERI mediated Ca+2 mobilization	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 Calcineurin subunit B type 1 Calmodulin-1 GRB2-related adaptor protein 2 Guanine nucleotide exchange factor VAV2 Guanine nucleotide exchange factor VAV3 Ig heavy chain V region 3-6 Ig lambda-2 chain C region Ig lambda-3 chain C region Immunoglobulin heavy constant epsilon Immunoglobulin heavy variable 13-2 Immunoglobulin heavy variable 16-1 Immunoglobulin heavy variable 3-1 (Fragment) Immunoglobulin heavy variable 3-5 Immunoglobulin heavy variable 5-12 (Fragment) Immunoglobulin heavy variable 5-12-4 (Fragment) Immunoglobulin heavy variable 5-16 Immunoglobulin heavy variable 5-17 (Fragment) Immunoglobulin heavy variable 5-4 (Fragment) Immunoglobulin heavy variable 5-6 (Fragment) Immunoglobulin heavy variable 5-9 (Fragment) Immunoglobulin heavy variable 6-3 (Fragment) Immunoglobulin heavy variable 6-6 (Fragment) Immunoglobulin heavy variable 7-3 (Fragment) Immunoglobulin heavy variable 8-13 Immunoglobulin heavy variable 8-8 (Fragment) Immunoglobulin heavy variable V12-3 (Fragment) Immunoglobulin heavy variable V3-3 Immunoglobulin heavy variable V3-4 (Fragment) Immunoglobulin heavy variable V3-8 (Fragment) Immunoglobulin heavy variable V6-4 Immunoglobulin heavy variable V6-5 Immunoglobulin heavy variable V6-7 (Fragment) Immunoglobulin heavy variable V8-11 (Fragment) Immunoglobulin heavy variable V8-2 (Fragment) Immunoglobulin heavy variable V8-4 Immunoglobulin heavy variable V8-5 (Fragment) Immunoglobulin heavy variable V8-6 Immunoglobulin heavy variable V8-9 Immunoglobulin kappa chain variable 1-122 (Fragment) Immunoglobulin kappa chain variable 1-88 (Fragment) Immunoglobulin kappa chain variable 15-103 (Fragment) Immunoglobulin kappa chain variable 2-137 (Fragment) Immunoglobulin kappa chain variable 20-101-2 (Fragment) Immunoglobulin kappa variable 1-110 (Fragment) Immunoglobulin kappa variable 1-117 (Fragment) Immunoglobulin kappa variable 1-131 (Fragment) Immunoglobulin kappa variable 1-132 (Fragment) Immunoglobulin kappa variable 1-133 (Fragment) Immunoglobulin kappa variable 1-135 (Fragment) Immunoglobulin kappa variable 11-125 Immunoglobulin kappa variable 16-104 (Fragment) Immunoglobulin kappa variable 17-121 Immunoglobulin kappa variable 2-109 (Fragment) Immunoglobulin kappa variable 2-112 Immunoglobulin kappa variable 8-21 (Fragment) Immunoglobulin lambda constant 1 (Fragment) Immunoglobulin lambda-like polypeptide 1 Linker for activation of T-cells family member 1 Lymphocyte cytosolic protein 2 Nuclear factor of activated T-cells, cytoplasmic 1 Nuclear factor of activated T-cells, cytoplasmic 2 Nuclear factor of activated T-cells, cytoplasmic 3 Predicted gene, 20730 Protein phosphatase 3 catalytic subunit alpha Proto-oncogene vav Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform Son of sevenless homolog 1 Tyrosine-protein kinase BTK Tyrosine-protein kinase ITK/TSK Tyrosine-protein kinase Lyn Tyrosine-protein kinase SYK Tyrosine-protein kinase TXK Tyrosine-protein kinase Tec	A0A075B5J6 A0A075B5K3 A0A075B5K6 A0A075B5P9 A0A075B5Q0 A0A075B5Q2 A0A075B5Q4 A0A075B5R0 A0A075B5R1 A0A075B5R2 A0A075B5S0 A0A075B5S4 A0A075B5S6 A0A075B5T0 A0A075B5T1 A0A075B5T2 A0A075B5T3 A0A075B5W4 A0A075B5X1 A0A075B5X4 A0A075B5Y0 A0A075B693 A0A087WPN7 A0A0A6YW58 A0A0A6YWG4 A0A0A6YWU3 A0A0A6YXF1 A0A0A6YXQ0 A0A0A6YY60 A0A0B4J1H6 A0A0B4J1H7 A0A0B4J1H8 A0A0B4J1H9 A0A0B4J1I0 A0A0B4J1I1 A0A0G2JDU3 A0A0G2JE99 A0A140T8M0 A0A140T8M8 A0A140T8M9 A0A140T8N1 A0A140T8P3 A0A140T8P7 J3QK03 J3QNN6 O54957 O88942 O89100 P01627 P01650 P01844 P01845 P06336 P0DP26 P18531 P18533 P20764 P24604 P25911 P27870 P35991 P42682 P48025 P48453 P63328 P97305 Q03526 Q60591 Q60787 Q60992 Q62077 Q62245 Q63810 Q8CIH5 Q9R0C8	Bpk Btk Calm Calm1 Calna Calnb Cam Cam1 Cnb Emt Gads Gm16932 Gm20730 Gm5153 Grap2 Grb2l Grid IGHE Ighv12-3 Ighv13-2 Ighv16-1 Ighv3-1 Ighv3-3 Ighv3-4 Ighv3-5 Ighv3-6 Ighv3-8 Ighv5-12 Ighv5-12-4 Ighv5-16 Ighv5-17 Ighv5-4 Ighv5-6 Ighv5-9 Ighv6-3 Ighv6-4 Ighv6-5 Ighv6-6 Ighv6-7 Ighv7-3 Ighv8-11 Ighv8-13 Ighv8-2 Ighv8-4 Ighv8-5 Ighv8-6 Ighv8-8 Ighv8-9 Igkv1-110 Igkv1-117 Igkv1-122 Igkv1-131 Igkv1-132 Igkv1-133 Igkv1-135 Igkv1-88 Igkv11-125 Igkv15-103 Igkv16-104 Igkv17-121 Igkv2-109 Igkv2-112 Igkv2-137 Igkv20-101-2 Igkv8-21 Igl-5 Iglc1 Iglc2 Iglc3 Igll1 Itk Lat Lcp2 Lyn Mona Nfat1 Nfat2 Nfat4 Nfatc Nfatc1 Nfatc2 Nfatc3 Nfatp Plcg-1 Plcg1 Plcg2 Ppp3ca Ppp3cb Ppp3r1 Rlk Sos1 Syk Sykb Tec Tlk Tsk Txk Vav Vav1 Vav2 Vav3 ptk72
Pre-NOTCH Processing in Golgi	Furin Neurogenic locus notch homolog protein 1 Neurogenic locus notch homolog protein 3 Neurogenic locus notch homolog protein 4 Transmembrane emp24 domain-containing protein 2	P23188 P31695 Q01705 Q61982 Q9R0Q3	Fur Furin Int-3 Int3 Motch Notch1 Notch3 Notch4 Pcsk3 Rnp24 Sid394 Tmed2
Endosomal/Vacuolar pathway	Beta-2-microglobulin Class Ib MHC antigen Qa-2 H-2 class I histocompatibility antigen, D-37 alpha chain H-2 class I histocompatibility antigen, D-P alpha chain H-2 class I histocompatibility antigen, K-B alpha chain H-2 class I histocompatibility antigen, Q10 alpha chain H-2 class I histocompatibility antigen, Q7 alpha chain H-2 class I histocompatibility antigen, TLA(B) alpha chain Histocompatibility 2, M region locus 10.1 Histocompatibility 2, M region locus 10.2 Histocompatibility 2, M region locus 10.3 Histocompatibility 2, M region locus 10.4 Histocompatibility 2, M region locus 10.5 Histocompatibility 2, M region locus 10.6 Histocompatibility 2, M region locus 11 (Fragment) Histocompatibility 2, M region locus 1 Histocompatibility 2, M region locus 2 Histocompatibility 2, M region locus 3 Histocompatibility 2, M region locus 5 Histocompatibility 2, M region locus 9 Histocompatibility 2, Q region locus 1 Histocompatibility 2, Q region locus 2 Histocompatibility 2, Q region locus 4 Histocompatibility 2, T region locus 22 Leucyl-cystinyl aminopeptidase	A7VMS3 F6U8V3 F7CXU4 O19441 O19442 O19443 P01887 P01898 P01901 P06339 P14427 P14429 P14432 P79568 Q31093 Q31615 Q4KN81 Q6W9L1 Q85ZW5 Q85ZW6 Q85ZW7 Q85ZW8 Q85ZW9 Q8C129 Q8HWB2	B2m Gm11132 H-2M3 H2-D1 H2-Gs10 H2-K H2-K1 H2-M1 H2-M10.1 H2-M10.2 H2-M10.3 H2-M10.4 H2-M10.5 H2-M10.6 H2-M11 H2-M2 H2-M3 H2-M5 H2-M9 H2-Q1 H2-Q10 H2-Q2 H2-Q4 H2-Q6 H2-Q7 H2-T22 H2-T23 H2-T3 H2-gs10 Lnpep M10 M9
Ligand-independent caspase activation via DCC	Caspase-3 Caspase-9 DCC-interacting protein 13-alpha Netrin receptor DCC	P70211 P70677 Q8C3Q9 Q8K3H0	Appl1 Casp3 Casp9 Cpp32 Dcc Dip13a Kiaa1428 Mch6
Dual incision in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin-4A Cullin-4B Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA excision repair protein ERCC-1 DNA excision repair protein ERCC-5 DNA excision repair protein ERCC-6 DNA excision repair protein ERCC-8 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA polymerase kappa DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Polyubiquitin-B Polyubiquitin-C Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor SYF1 Proliferating cell nuclear antigen RNA helicase aquarius Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor A protein 1 UV-stimulated scaffold protein A Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Zinc finger protein 830	A2A432 F8VPZ5 O08740 O08811 O35654 O54956 O70422 P07903 P08775 P0CG49 P0CG50 P10711 P17918 P35601 P35689 P49135 P51949 P52431 P60898 P61219 P62488 P62876 P62878 P62983 P62984 P97760 Q03147 Q3TCH7 Q3U1J4 Q61458 Q62193 Q63871 Q64267 Q69ZQ2 Q6A4J8 Q80UW8 Q8CFD5 Q8CFI7 Q8CFQ3 Q8K2X8 Q8R1N0 Q8R323 Q8VD76 Q8VEE4 Q923G2 Q99J62 Q99KP6 Q9CQ36 Q9CQ71 Q9CWP8 Q9D0F6 Q9D479 Q9D7M8 Q9DBA9 Q9DCD2 Q9EQ28 Q9JIB4 Q9JKP7 Q9QUG2 Q9QZD4 Q9WUK4 Q9WVF7	Aqr Btf2p44 Cak Ccdc16 Ccnh Cdk7 Cdkn7 Ckn1 Crk4 Csa Csb Cul4a Cul4b D17Wsu155e Ddb1 Dinb1 Ercc-1 Ercc-5 Ercc1 Ercc2 Ercc3 Ercc4 Ercc5 Ercc6 Ercc8 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Hausp Ibf-1 Isy1 Kiaa0560 Kiaa0695 Kiaa1160 Kiaa1530 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Omcg1 Pcna Pold1 Pold2 Pold3 Pold4 Pole Pole1 Pole2 Pole3 Pole4 Polk Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Prp19 Prpf19 Rbx1 Recc1 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Rps27a Snev Syf1 Tcea1 Tceat Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Usp7 Uvssa Xab2 Xpa Xpac Xpb Xpbc Xpd Xpf Xpg Zfp830 Znf830
Translesion synthesis by POLK	DNA polymerase kappa DNA polymerase zeta catalytic subunit DNA repair protein REV1 Mitotic spindle assembly checkpoint protein MAD2B Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG49 P0CG50 P17918 P35601 P62983 P62984 Q61493 Q62193 Q8R323 Q8VEE4 Q920Q2 Q99J62 Q9CQ71 Q9D0F6 Q9D752 Q9QUG2 Q9WUK4	Dinb1 Ibf-1 Mad2b Mad2l2 Pcna Polk Polz Recc1 Rev1 Rev1l Rev3l Rev7 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Sez4 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2

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