GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **1151 - 1175** of **2074** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol	Organism
Defective LFNG causes SCDO3	Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe Neurogenic locus notch homolog protein 1 Neurogenic locus notch homolog protein 2 Neurogenic locus notch homolog protein 3 Neurogenic locus notch homolog protein 4	P46531 Q04721 Q8NES3 Q99466 Q9UM47	INT3 LFNG NOTCH1 NOTCH2 NOTCH3 NOTCH4 TAN1	Homo sapiens (human)
ALPK1 signaling pathway	Alpha-protein kinase 1 Mitogen-activated protein kinase kinase kinase 7 Polyubiquitin-B Polyubiquitin-C TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 TNF receptor-associated factor 6 TRAF-interacting protein with FHA domain-containing protein A Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O43318 P0CG47 P0CG48 P62979 P62987 Q15750 Q8N5C8 Q96CG3 Q96QP1 Q9NYJ8 Q9Y4K3	ALPK1 KIAA0733 KIAA1527 LAK MAP3K7 MAP3K7IP1 MAP3K7IP2 MAP3K7IP3 RNF85 RPS27A T2BP TAB1 TAB2 TAB3 TAK1 TIFA TRAF6 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)
Defective AHCY causes HMAHCHD	Adenosylhomocysteinase	P23526	AHCY SAHH	Homo sapiens (human)
PRC2 methylates histones and DNA	DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 3A DNA (cytosine-5)-methyltransferase 3B Histone H2A type 1-B/E Histone H2A type 1-C Histone H2A type 1-D Histone H2A type 1-J Histone H2A type 2-A Histone H2A type 2-C Histone H2A-Bbd type 1 Histone H2A.J Histone H2A.V Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/F/G/I Histone H2B type 1-D Histone H2B type 1-H Histone H2B type 1-J Histone H2B type 1-K Histone H2B type 1-L Histone H2B type 1-M Histone H2B type 1-N Histone H2B type 1-O Histone H2B type 2-E Histone H2B type 3-B Histone H2B type F-S Histone H3.1 Histone H3.2 Histone H3.3 Histone H4 Histone-binding protein RBBP4 Histone-binding protein RBBP7 Histone-lysine N-methyltransferase EZH2 Metal-response element-binding transcription factor 2 PHD finger protein 19 PHD finger protein 1 Polycomb protein EED Polycomb protein SUZ12 Protein Jumonji Zinc finger protein AEBP2	O43189 O60814 O75530 P04908 P06899 P0C5Y9 P16104 P20671 P23527 P26358 P33778 P57053 P58876 P62805 P62807 P68431 P84243 Q09028 Q15022 Q15910 Q16576 Q16777 Q16778 Q5T6S3 Q6FI13 Q6ZN18 Q71DI3 Q71UI9 Q8N257 Q92833 Q93077 Q93079 Q96A08 Q99877 Q99878 Q99879 Q99880 Q9BTM1 Q9UBC3 Q9Y483 Q9Y6K1	AEBP2 AIM CHET9 CXXC9 DNMT DNMT1 DNMT3A DNMT3B EED EZH2 H2AB1 H2AC14 H2AC18 H2AC19 H2AC20 H2AC4 H2AC6 H2AC7 H2AC8 H2AFA H2AFB1 H2AFE H2AFG H2AFJ H2AFL H2AFM H2AFO H2AFQ H2AFV H2AFX H2AJ H2AV H2AX H2AZ2 H2BC1 H2BC10 H2BC11 H2BC12 H2BC12L H2BC13 H2BC14 H2BC15 H2BC17 H2BC21 H2BC26 H2BC3 H2BC4 H2BC5 H2BC6 H2BC7 H2BC8 H2BC9 H2BFA H2BFB H2BFC H2BFD H2BFE H2BFF H2BFG H2BFH H2BFJ H2BFK H2BFL H2BFN H2BFQ H2BFR H2BFS H2BFT H2BS1 H2BU1 H3-3A H3-3B H3.3A H3.3B H3C1 H3C10 H3C11 H3C12 H3C13 H3C14 H3C15 H3C2 H3C3 H3C4 H3C6 H3C7 H3C8 H3F2 H3F3 H3F3A H3F3B H3FA H3FB H3FC HIST1H3C H3FD H3FF H3FH H3FI H3FJ H3FK H3FL H3FM H4-16 H4/A H4/B H4/C H4/D H4/E H4/G H4/H H4/I H4/J H4/K H4/M H4/N H4/O H4C1 H4C11 H4C12 H4C13 H4C14 H4C15 H4C16 H4C2 H4C3 H4C4 H4C5 H4C6 H4C8 H4C9 H4F2 H4FA H4FB H4FC H4FD H4FE H4FG H4FH H4FI H4FJ H4FK H4FM H4FN H4FO HIRIP1 HIRIP2 HIST1H2AB HIST1H2AC HIST1H2AD HIST1H2AE HIST1H2AJ HIST1H2BA HIST1H2BB HIST1H2BC HIST1H2BD HIST1H2BE HIST1H2BF HIST1H2BG HIST1H2BH HIST1H2BI HIST1H2BJ HIST1H2BK HIST1H2BL HIST1H2BM HIST1H2BN HIST1H2BO HIST1H3A HIST1H3B HIST1H3D HIST1H3E HIST1H3F HIST1H3G HIST1H3H HIST1H3I HIST1H3J HIST1H4A HIST1H4B HIST1H4C HIST1H4D HIST1H4E HIST1H4F HIST1H4H HIST1H4I HIST1H4J HIST1H4K HIST1H4L HIST2H2AA HIST2H2AA3 HIST2H2AA4 HIST2H2AC HIST2H2BE HIST2H3A HIST2H3C HIST2H3D HIST2H4 HIST2H4A HIST2H4B HIST3H2BB HIST4H4 JARID2 JJAZ1 JMJ KIAA0160 KMT6 MTF2 PCL1 PCL2 PCL3 PHF1 PHF19 RBAP46 RBAP48 RBBP4 RBBP7 SUZ12 TSH2B	Homo sapiens (human)
ARMS-mediated activation	14-3-3 protein beta/alpha Adapter molecule crk Beta-nerve growth factor High affinity nerve growth factor receptor Kinase D-interacting substrate of 220 kDa Ras-related protein Rap-1A Serine/threonine-protein kinase B-raf	P01138 P04629 P15056 P31946 P46108 P62834 Q9ULH0	ARMS BRAF BRAF1 CRK KIAA1250 KIDINS220 KREV1 MTC NGF NGFB NTRK1 RAFB1 RAP1A TRK TRKA YWHAB	Homo sapiens (human)
Signaling by NODAL	Activin receptor type-1B Activin receptor type-1C Activin receptor type-2A Activin receptor type-2B Cerberus Cryptic protein DAN domain family member 5 Dr1-associated corepressor Embryonic growth/differentiation factor 1 Forkhead box protein H1 Forkhead box protein O3 Furin Left-right determination factor 1 Left-right determination factor 2 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Nodal homolog Proprotein convertase subtilisin/kexin type 6 Protein Cripto Putative protein CRIPTO3	O00292 O43524 O75593 O75610 O95813 P09958 P0CG37 P13385 P27037 P27361 P27539 P28482 P29122 P36896 P51864 P84022 Q13485 Q13705 Q14919 Q15796 Q8N907 Q8NER5 Q96S42	ACVR1B ACVR1C ACVR2 ACVR2A ACVR2B ACVRLK4 ALK4 ALK7 CER1 CER2 CFC1 CKTSF1B3 CRIPTO CRIPTO-1 CRIPTO-3 CRIPTO3 DAND4 DAND5 DPC4 DRAP1 EBAF ERK1 ERK2 FAST1 FAST2 FKHRL1 FOXH1 FOXO3 FOXO3A FUR FURIN GDF1 GREM3 LEFTA LEFTB LEFTY1 LEFTY2 LEFTYA LEFTYB MADH2 MADH3 MADH4 MADR2 MAPK1 MAPK3 NODAL PACE PACE4 PCSK3 PCSK6 PRKM1 PRKM2 PRKM3 SMAD2 SMAD3 SMAD4 SP1 TDGF1 TDGF1P3 TDGF2 TDGF3 TGFB4	Homo sapiens (human)
Ion homeostasis	ATP-binding cassette sub-family C member 9 ATP-sensitive inward rectifier potassium channel 11 Aspartyl/asparaginyl beta-hydroxylase Calcium release-activated calcium channel protein 1 Calcium/calmodulin-dependent protein kinase type II subunit alpha Calcium/calmodulin-dependent protein kinase type II subunit beta Calcium/calmodulin-dependent protein kinase type II subunit delta Calcium/calmodulin-dependent protein kinase type II subunit gamma Calmodulin-1 Cardiac phospholamban Chloride intracellular channel protein 2 FXYD domain-containing ion transport regulator 3 FXYD domain-containing ion transport regulator 4 FXYD domain-containing ion transport regulator 6 FXYD domain-containing ion transport regulator 7 Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 Inositol 1,4,5-trisphosphate-gated calcium channel ITPR2 Inositol 1,4,5-trisphosphate-gated calcium channel ITPR3 Myotonin-protein kinase Nitric oxide synthase 1 Peptidyl-prolyl cis-trans isomerase FKBP1B Phospholemman Plasma membrane calcium-transporting ATPase 1 Plasma membrane calcium-transporting ATPase 2 Plasma membrane calcium-transporting ATPase 3 Plasma membrane calcium-transporting ATPase 4 Protein orai-2 Ryanodine receptor 1 Ryanodine receptor 2 Ryanodine receptor 3 S-adenosylhomocysteine hydrolase-like protein 1 Sarcolipin Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 Short transient receptor potential channel 1 Sodium/calcium exchanger 1 Sodium/calcium exchanger 2 Sodium/calcium exchanger 3 Sodium/potassium-transporting ATPase subunit alpha-1 Sodium/potassium-transporting ATPase subunit alpha-2 Sodium/potassium-transporting ATPase subunit alpha-3 Sodium/potassium-transporting ATPase subunit alpha-4 Sodium/potassium-transporting ATPase subunit beta-1 Sodium/potassium-transporting ATPase subunit beta-2 Sodium/potassium-transporting ATPase subunit beta-3 Sodium/potassium-transporting ATPase subunit gamma Sorcin Stromal interaction molecule 1 Triadin Troponin I, cardiac muscle cAMP-dependent protein kinase catalytic subunit alpha	O00168 O00631 O14983 O15247 O43865 O60706 P05023 P05026 P0DP23 P13637 P14415 P16615 P17612 P19429 P20020 P21817 P23634 P26678 P29475 P30626 P32418 P48995 P50993 P54709 P54710 P57103 P58549 P59646 P68106 Q01814 Q09013 Q12797 Q13061 Q13554 Q13555 Q13557 Q13586 Q13733 Q14571 Q14573 Q14643 Q14654 Q14802 Q15413 Q16720 Q92736 Q93084 Q96D31 Q96SN7 Q9H0Q3 Q9UPR5 Q9UQM7	ABCC9 AHCYL1 ASPH ATP1A1 ATP1A2 ATP1A3 ATP1A4 ATP1AL2 ATP1B ATP1B1 ATP1B2 ATP1B3 ATP1C ATP1G1 ATP2A1 ATP2A2 ATP2A3 ATP2B ATP2B1 ATP2B2 ATP2B3 ATP2B4 BAH C7orf19 CALM CALM1 CAM CAM1 CAM2 CAMK CAMK-II CAMK2 CAMK2A CAMK2B CAMK2D CAMK2G CAMKA CAMKB CAMKD CAMKG CBCIP2 CLIC2 CNC CRACM1 DCAL DM1PK DMPK FKBP12.6 FKBP1B FKBP1L FKBP9 FXYD1 FXYD2 FXYD3 FXYD4 FXYD6 FXYD7 GOK HBRR INSP3R1 IRBIT ITPR1 ITPR2 ITPR3 KCNJ11 KIAA0778 KIAA0968 KIAA1087 MAT8 MDPK MXRA1 NCX1 NCX2 NCX3 NOS1 ORAI1 ORAI2 OTK4 PKACA PLB PLM PLML PLN PMCA1 PMCA2 PRKACA RYDR RYR1 RYR2 RYR3 SLC8A1 SLC8A2 SLC8A3 SLN SRI STIM1 SUR2 TMEM142A TMEM142B TNNC1 TNNI3 TRDN TRP1 TRPC1 XPVKONA	Homo sapiens (human)
DNA methylation	DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 3-like DNA (cytosine-5)-methyltransferase 3A DNA (cytosine-5)-methyltransferase 3B E3 ubiquitin-protein ligase UHRF1 Histone H2A type 1-B/E Histone H2A type 1-C Histone H2A type 1-D Histone H2A type 1-J Histone H2A type 2-A Histone H2A type 2-C Histone H2A-Bbd type 1 Histone H2A.J Histone H2A.V Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/F/G/I Histone H2B type 1-D Histone H2B type 1-H Histone H2B type 1-J Histone H2B type 1-K Histone H2B type 1-L Histone H2B type 1-M Histone H2B type 1-N Histone H2B type 1-O Histone H2B type 2-E Histone H2B type 3-B Histone H2B type F-S Histone H3.1 Histone H3.2 Histone H3.3 Histone H4	O60814 P04908 P06899 P0C5Y9 P16104 P20671 P23527 P26358 P33778 P57053 P58876 P62805 P62807 P68431 P84243 Q16777 Q16778 Q6FI13 Q71DI3 Q71UI9 Q8N257 Q93077 Q93079 Q96A08 Q96T88 Q99877 Q99878 Q99879 Q99880 Q9BTM1 Q9UBC3 Q9UJW3 Q9Y6K1	AIM CXXC9 DNMT DNMT1 DNMT3A DNMT3B DNMT3L H2AB1 H2AC14 H2AC18 H2AC19 H2AC20 H2AC4 H2AC6 H2AC7 H2AC8 H2AFA H2AFB1 H2AFE H2AFG H2AFJ H2AFL H2AFM H2AFO H2AFQ H2AFV H2AFX H2AJ H2AV H2AX H2AZ2 H2BC1 H2BC10 H2BC11 H2BC12 H2BC12L H2BC13 H2BC14 H2BC15 H2BC17 H2BC21 H2BC26 H2BC3 H2BC4 H2BC5 H2BC6 H2BC7 H2BC8 H2BC9 H2BFA H2BFB H2BFC H2BFD H2BFE H2BFF H2BFG H2BFH H2BFJ H2BFK H2BFL H2BFN H2BFQ H2BFR H2BFS H2BFT H2BS1 H2BU1 H3-3A H3-3B H3.3A H3.3B H3C1 H3C10 H3C11 H3C12 H3C13 H3C14 H3C15 H3C2 H3C3 H3C4 H3C6 H3C7 H3C8 H3F2 H3F3 H3F3A H3F3B H3FA H3FB H3FC HIST1H3C H3FD H3FF H3FH H3FI H3FJ H3FK H3FL H3FM H4-16 H4/A H4/B H4/C H4/D H4/E H4/G H4/H H4/I H4/J H4/K H4/M H4/N H4/O H4C1 H4C11 H4C12 H4C13 H4C14 H4C15 H4C16 H4C2 H4C3 H4C4 H4C5 H4C6 H4C8 H4C9 H4F2 H4FA H4FB H4FC H4FD H4FE H4FG H4FH H4FI H4FJ H4FK H4FM H4FN H4FO HIRIP1 HIRIP2 HIST1H2AB HIST1H2AC HIST1H2AD HIST1H2AE HIST1H2AJ HIST1H2BA HIST1H2BB HIST1H2BC HIST1H2BD HIST1H2BE HIST1H2BF HIST1H2BG HIST1H2BH HIST1H2BI HIST1H2BJ HIST1H2BK HIST1H2BL HIST1H2BM HIST1H2BN HIST1H2BO HIST1H3A HIST1H3B HIST1H3D HIST1H3E HIST1H3F HIST1H3G HIST1H3H HIST1H3I HIST1H3J HIST1H4A HIST1H4B HIST1H4C HIST1H4D HIST1H4E HIST1H4F HIST1H4H HIST1H4I HIST1H4J HIST1H4K HIST1H4L HIST2H2AA HIST2H2AA3 HIST2H2AA4 HIST2H2AC HIST2H2BE HIST2H3A HIST2H3C HIST2H3D HIST2H4 HIST2H4A HIST2H4B HIST3H2BB HIST4H4 ICBP90 NP95 RNF106 TSH2B UHRF1	Homo sapiens (human)
BBSome-mediated cargo-targeting to cilium	ADP-ribosylation factor-like protein 6 BBSome complex assembly protein BBS10 BBSome complex member BBS1 BBSome complex member BBS2 BBSome complex member BBS4 BBSome complex member BBS5 BBSome complex member BBS7 BBSome-interacting protein 1 Chaperonin-containing T-complex member BBS12 Leucine zipper transcription factor-like protein 1 Melanin-concentrating hormone receptor 1 Molecular chaperone MKKS Protein PTHB1 Protein smoothened Rab-3A-interacting protein Somatostatin receptor type 3 T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit gamma T-complex protein 1 subunit theta Tetratricopeptide repeat protein 8	A8MTZ0 P17987 P32745 P48643 P49368 P50990 P50991 P78371 Q3SYG4 Q6ZW61 Q8IWZ6 Q8N3I7 Q8NFJ9 Q8TAM1 Q8TAM2 Q96QF0 Q96RK4 Q99705 Q99835 Q9BXC9 Q9H0F7 Q9NPJ1 Q9NQ48	99D8.1 ARL6 BBIP1 BBIP10 BBS1 BBS10 BBS12 BBS2 BBS2L1 BBS2L2 BBS3 BBS4 BBS5 BBS6 BBS7 BBS8 BBS9 C12orf58 C21orf112 C4orf24 CCT1 CCT2 CCT3 CCT4 CCT5 CCT8 CCTA CCTB CCTD CCTE CCTG CCTQ GPR24 KIAA0002 KIAA0098 LZTFL1 MCHR1 MKKS NCRNA00081 PTHB1 RAB3IP RABIN8 SLC1 SMO SMOH SRB SSTR3 TCP1 TRIC5 TTC8	Homo sapiens (human)
Mitotic Metaphase/Anaphase Transition	F-box only protein 5 Serine/threonine-protein kinase PLK1	P53350 Q9UKT4	EMI1 FBX5 FBXO5 PLK PLK1	Homo sapiens (human)
RHO GTPases activate PKNs	14-3-3 protein beta/alpha 14-3-3 protein epsilon 14-3-3 protein eta 14-3-3 protein gamma 14-3-3 protein sigma 14-3-3 protein theta 14-3-3 protein zeta/delta 3-phosphoinositide-dependent protein kinase 1 M-phase inducer phosphatase 3 Myosin light polypeptide 6 Myosin regulatory light chain 12B Myosin regulatory light polypeptide 9 Myosin-10 Myosin-11 Myosin-14 Myosin-9 Protein phosphatase 1 regulatory subunit 12A Protein phosphatase 1 regulatory subunit 12B Protein phosphatase 1 regulatory subunit 14A Ras-related C3 botulinum toxin substrate 1 Rho-related GTP-binding protein RhoB Rho-related GTP-binding protein RhoC Serine/threonine-protein kinase N1 Serine/threonine-protein kinase N2 Serine/threonine-protein kinase N3 Serine/threonine-protein kinase PAK 1 Serine/threonine-protein phosphatase PP1-beta catalytic subunit Transforming protein RhoA	O14950 O14974 O15530 O60237 P08134 P24844 P27348 P30307 P31946 P31947 P35579 P35580 P35749 P60660 P61586 P61981 P62140 P62258 P62745 P63000 P63104 Q04917 Q13153 Q16512 Q16513 Q6P5Z2 Q7Z406 Q96A00	ARH12 ARH6 ARH9 ARHA ARHB ARHC CDC25C CPI17 HME1 KIAA0866 KIAA2034 MBS MLC2 MRLC1 MRLC2 MYH10 MYH11 MYH14 MYH9 MYL12B MYL6 MYL9 MYLC2B MYPT1 MYPT2 MYRL2 PAK1 PDK1 PDPK1 PKN PKN1 PKN2 PKN3 PKNBETA PPP1CB PPP1INL PPP1R12A PPP1R12B PPP1R14A PRK1 PRK2 PRKCL1 PRKCL2 RAC1 RHO12 RHOA RHOB RHOC SFN TC25 YWHA1 YWHAB YWHAE YWHAG YWHAH YWHAQ YWHAZ	Homo sapiens (human)
Calcineurin activates NFAT	Calcineurin subunit B type 1 Calmodulin-1 Nuclear factor of activated T-cells, cytoplasmic 1 Nuclear factor of activated T-cells, cytoplasmic 2 Nuclear factor of activated T-cells, cytoplasmic 3 Peptidyl-prolyl cis-trans isomerase A Peptidyl-prolyl cis-trans isomerase FKBP1A Protein phosphatase 3 catalytic subunit alpha Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform	O95644 P0DP23 P16298 P62937 P62942 P63098 Q08209 Q12968 Q13469	CALM CALM1 CALNA CALNA2 CALNB CAM CAM1 CNA CNA2 CNB CYPA FKBP1 FKBP12 FKBP1A NFAT1 NFAT2 NFAT4 NFATC NFATC1 NFATC2 NFATC3 NFATP PPIA PPP3CA PPP3CB PPP3R1	Homo sapiens (human)
Defective SLC1A3 causes episodic ataxia 6 (EA6)	Excitatory amino acid transporter 1	P43003	EAAT1 GLAST GLAST1 SLC1A3	Homo sapiens (human)
Intra-Golgi traffic	ADP-ribosylation factor 1 Alkaline phosphatase, placental type Alpha-mannosidase 2 Alpha-mannosidase 2x Alpha-soluble NSF attachment protein BET1-like protein Beta-soluble NSF attachment protein Conserved oligomeric Golgi complex subunit 1 Conserved oligomeric Golgi complex subunit 2 Conserved oligomeric Golgi complex subunit 3 Conserved oligomeric Golgi complex subunit 4 Conserved oligomeric Golgi complex subunit 5 Conserved oligomeric Golgi complex subunit 6 Conserved oligomeric Golgi complex subunit 7 Conserved oligomeric Golgi complex subunit 8 Cytohesin-1 Cytohesin-2 Cytohesin-3 Cytohesin-4 Gamma-soluble NSF attachment protein Golgi SNAP receptor complex member 1 Golgi SNAP receptor complex member 2 Golgi integral membrane protein 4 Golgin subfamily A member 5 Guanine nucleotide exchange factor subunit RIC1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC Protein CASP RAB6A-GEF complex partner protein 2 Ras-related protein Rab-30 Ras-related protein Rab-33B Ras-related protein Rab-36 Ras-related protein Rab-39A Ras-related protein Rab-41 Synaptobrevin homolog YKT6 Synaptosomal-associated protein 29 Syntaxin-16 Syntaxin-5 Syntaxin-6 Thyroid receptor-interacting protein 11 Vacuolar protein sorting-associated protein 45 Vesicle transport through interaction with t-SNAREs homolog 1A Vesicle-fusing ATPase	O00461 O14653 O14662 O15498 O43739 O43752 O60476 O95249 O95721 O95755 P05187 P33908 P46459 P49641 P54920 P83436 P84077 Q13190 Q13948 Q14746 Q14964 Q15438 Q15643 Q15771 Q16706 Q4ADV7 Q5JT25 Q8TBA6 Q8WTW3 Q92546 Q96AJ9 Q96JB2 Q96MW5 Q99418 Q99747 Q9H082 Q9H115 Q9H9E3 Q9NR34 Q9NRW7 Q9NYM9 Q9UIA0 Q9UP83 Q9Y2V7	ALPP ARF1 ARNO ARNO3 BET1L CEV14 CIP150 COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 CUTL1 CUX1 CYT4 CYTH1 CYTH2 CYTH3 CYTH4 D17S811E GIMPC GOLGA5 GOLIM4 GOLPH4 GOLTC1 GOSR1 GOSR2 GPP130 GRP1 GS15 GS27 GS28 GTC90 KIAA0258 KIAA1134 KIAA1381 KIAA1432 LDLB LDLC MAN1A1 MAN1A2 MAN1A3 MAN1B MAN1C MAN1C1 MAN2A1 MAN2A2 MANA2 MANA2X NAPA NAPB NAPG NSF PLAP PSCD1 PSCD2 PSCD2L PSCD3 PSCD4 RAB30 RAB33B RAB36 RAB39 RAB39A RAB41 RETII RFG5 RGP1 RIC1 SEC34 SNAP29 SNAPA SNAPB SNAPG STX16 STX5 STX5A STX6 TRIP11 VPS45 VPS45A VPS45B VTI1A YKT6	Homo sapiens (human)
Biosynthesis of aspirin-triggered D-series resolvins	Leukotriene A-4 hydrolase Polyunsaturated fatty acid 5-lipoxygenase	P09917 P09960	ALOX5 LOG5 LTA4 LTA4H	Homo sapiens (human)
Intrinsic Pathway of Fibrin Clot Formation	Alpha-2-macroglobulin Antithrombin-III Coagulation factor IX Coagulation factor VIII Coagulation factor X Coagulation factor XI Coagulation factor XII Complement component 1 Q subcomponent-binding protein, mitochondrial Glia-derived nexin Heparin cofactor 2 Kininogen-1 Lysosomal Pro-X carboxypeptidase Plasma kallikrein Plasma protease C1 inhibitor Plasma serine protease inhibitor Platelet glycoprotein IX Platelet glycoprotein Ib alpha chain Platelet glycoprotein Ib beta chain Platelet glycoprotein V Prothrombin Vitamin K-dependent protein C Vitamin K-dependent protein S von Willebrand factor	P00451 P00734 P00740 P00742 P00748 P01008 P01023 P01042 P03951 P03952 P04070 P04275 P05154 P05155 P05546 P07093 P07225 P07359 P13224 P14770 P40197 P42785 Q07021	A2M AT3 BDK C1IN C1NH C1QBP CPAMD5 F10 F11 F12 F2 F8 F8C F8VWF F9 GC1QBP GP1BA GP1BB GP5 GP9 HABP1 HCF2 KLK3 KLKB1 KNG KNG1 PCI PCP PI7 PLANH3 PN1 PRCP PROC PROCI PROS PROS1 SERPINA5 SERPINC1 SERPIND1 SERPINE2 SERPING1 SF2P32 VWF	Homo sapiens (human)
MET receptor recycling	ADP-ribosylation factor 6 ADP-ribosylation factor-binding protein GGA3 Adapter molecule crk Crk-like protein GRB2-associated-binding protein 1 Hepatocyte growth factor receptor Hepatocyte growth factor Ras-related protein Rab-4A Ras-related protein Rab-4B	P08581 P14210 P20338 P46108 P46109 P61018 P62330 Q13480 Q9NZ52	ARF6 CRK CRKL GAB1 GGA3 HGF HPTA KIAA0154 MET RAB4 RAB4A RAB4B	Homo sapiens (human)
IRS-mediated signalling	Insulin receptor substrate 1 Insulin receptor substrate 2 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform	O00459 P27986 P35568 P42336 P42338 Q9Y4H2	GRB1 IRS1 IRS2 PIK3C1 PIK3CA PIK3CB PIK3R1 PIK3R2	Homo sapiens (human)
LXRs regulate gene expression to control bile acid homeostasis	Gastrotropin Nuclear receptor coactivator 1 Nuclear receptor corepressor 1 Nuclear receptor corepressor 2 Oxysterols receptor LXR-alpha Oxysterols receptor LXR-beta Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta UDP-glucuronosyltransferase 1A3	O75376 P19793 P28702 P35503 P51161 P55055 Q13133 Q15788 Q9Y618	BHLHE74 CTG26 FABP6 GNT1 ILBP ILLBP KIAA1047 LXRA LXRB NCOA1 NCOR1 NCOR2 NER NR1H2 NR1H3 NR2B1 NR2B2 RXRA RXRB SRC1 UGT1 UGT1A3 UNR	Homo sapiens (human)
FLT3 signaling through SRC family kinases	Fms-related tyrosine kinase 3 ligand Receptor-type tyrosine-protein kinase FLT3 Tyrosine-protein kinase Fyn Tyrosine-protein kinase HCK Tyrosine-protein kinase Lck Tyrosine-protein kinase SYK	P06239 P06241 P08631 P36888 P43405 P49771	CD135 FLK2 FLT3 FLT3LG FYN HCK LCK STK1 SYK	Homo sapiens (human)
Maturation of protein E	Envelope small membrane protein Polyubiquitin-B Polyubiquitin-C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P59637 P62979 P62987	E RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 sM	Homo sapiens (human)
Response of EIF2AK1 (HRI) to heme deficiency	Asparagine synthetase [glutamine-hydrolyzing] CCAAT/enhancer-binding protein beta CCAAT/enhancer-binding protein gamma Cyclic AMP-dependent transcription factor ATF-3 Cyclic AMP-dependent transcription factor ATF-4 Cyclic AMP-dependent transcription factor ATF-5 DNA damage-inducible transcript 3 protein Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 2-alpha kinase 1 Glutathione-specific gamma-glutamylcyclotransferase 1 Growth factor receptor-bound protein 10 Protein phosphatase 1 regulatory subunit 15A Tribbles homolog 3	O75807 P05198 P08243 P17676 P18847 P18848 P20042 P35638 P41091 P53567 Q13322 Q96RU7 Q9BQI3 Q9BUX1 Q9Y2D1	ASNS ATF3 ATF4 ATF5 ATFX BOTCH C20orf97 CEBPB CEBPG CHAC1 CHOP CHOP10 CREB2 DDIT3 EIF2A EIF2AK1 EIF2B EIF2G EIF2S1 EIF2S2 EIF2S3 GADD153 GADD34 GRB10 GRBIR HRI KIAA0207 KIAA1369 NIPK PPP1R15A SKIP3 TCF5 TRB3 TRIB3 TS11 TXREB	Homo sapiens (human)
Establishment of Sister Chromatid Cohesion	Cohesin subunit SA-1 Cohesin subunit SA-2 Double-strand-break repair protein rad21 homolog N-acetyltransferase ESCO1 N-acetyltransferase ESCO2 Sister chromatid cohesion protein PDS5 homolog A Sister chromatid cohesion protein PDS5 homolog B Sororin Structural maintenance of chromosomes protein 1A Structural maintenance of chromosomes protein 3 Wings apart-like protein homolog	O60216 Q14683 Q29RF7 Q56NI9 Q5FWF5 Q7Z5K2 Q8N3U4 Q8WVM7 Q96FF9 Q9NTI5 Q9UQE7	APRIN AS3 BAM BMH CDCA5 CSPG6 DXS423E EFO1 ESCO1 ESCO2 FOE HR21 KIAA0078 KIAA0178 KIAA0261 KIAA0648 KIAA0979 KIAA1911 NXP1 PDS5 PDS5A PDS5B RAD21 SA1 SA2 SB1.8 SCC1 SCC3 SMC1 SMC1A SMC1L1 SMC3 SMC3L1 STAG1 STAG2 WAPAL WAPL	Homo sapiens (human)
Tat-mediated HIV elongation arrest and recovery	Cyclin-T1 Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongin-A2 Elongin-A Elongin-B Elongin-C FACT complex subunit SPT16 FACT complex subunit SSRP1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Protein Tat RNA polymerase II elongation factor ELL RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor A protein 1 Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 O60563 P04608 P13984 P18615 P19387 P19388 P23193 P24928 P30876 P35269 P36954 P50750 P52434 P52435 P53803 P55199 P61218 P62487 P62875 P63272 Q08945 Q14241 Q15369 Q15370 Q8IXH7 Q8IYF1 Q8WX92 Q9H3P2 Q9Y5B0 Q9Y5B9	C19orf17 CCNT1 CDC2L4 CDK9 COBRA1 CTDP1 ELL ELOA ELOA2 ELOB ELOC FACT140 FACT80 FACTP140 FCP1 GTF2F1 GTF2F2 GTF2S KIAA1182 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RPB7 SPT4H SPT5 SPT5H SSRP1 SUPT16H SUPT4H SUPT4H1 SUPT5H TAK TCEA1 TCEB1 TCEB2 TCEB3 TCEB3B TCEB3L TFIIS TH1 TH1L WHSC2 tat	Homo sapiens (human)
Translesion synthesis by REV1	DNA polymerase zeta catalytic subunit DNA repair protein REV1 Mitotic spindle assembly checkpoint protein MAD2B Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O60673 P0CG47 P0CG48 P12004 P15927 P27694 P35244 P35249 P35250 P35251 P40937 P40938 P62979 P62987 Q9UBZ9 Q9UI95	MAD2B MAD2L2 PCNA POLZ REPA1 REPA2 REPA3 REV1 REV1L REV3 REV3L REV7 RFC1 RFC140 RFC2 RFC3 RFC4 RFC5 RPA1 RPA14 RPA2 RPA3 RPA32 RPA34 RPA70 RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)

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